Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g050890.2.1
CDS Infomation

nitrite reductase 2
Sequence

ATGACTTCTTTTTCTGTTAAATTTTCAGCTACTTCACTTCCAAATTCTAATAGATTTTCC
AAACTTCATGCTACTCCACCGCAGACGGTGGCGGTACCGTCGTACGGGGCGGCGGAGATA
GCTGCTGAAAGACTAGAGCCTAGAGTTGAGCAAAGAGATGGGTATTGGGTAGTTAAGGAT
AAGTTCAGACAAGGCATAAATCCAGCTGAAAAGGCGAAGATTGAAAAGGAACCAATGAAA
CTATTCACTGAAAATGGTATCGAAGATCTTGCTAAGATCTCGCTTGAAGAGATCGAGAAA
TCAAAGCTAACTAAAGAAGATATTGATATTCGCCTCAAGTGGCTTGGACTCTTCCATCGG
AGAAAACACCACTATGGTCGATTCATGATGCGATTGAAGCTTCCAAATGGAGTAACGACG
AGTGATCAAACTCGATATTTAGGTAGTGTGATTAGGAAATATGGGAAAGATGGATGTGGT
GATGTGACTACAAGGCAAAATTGGCAGATTCGTGGGGTTGTGTTACCTGATGTGCCTGAG
ATTCTAAAGGGGCTTGATGAAGTTGGCTTGACTAGTCTGCAGAGTGGCATGGATAATGTT
CGAAATCCGGTGGGGAATCCTCTCGCAGGGATTGATCTTCATGAAATTGTAGACACAAGG
CCTTACACTAATTTGCTGTCCCAATATGTCACCGCCAATTTTCGTGGCAATGTGGATGTG
ACTAACTTGCCAAGGAAGTGGAATGTATGTGTAATAGGGTCACATGATCTTTATGAGCAT
CCGCATATCAATGATCTTGCGTATATGCCTGCAACCAAAGATGGACGATTTGGATTCAAC
CTGCTTGTGGGTGGATTCTTCAGTCCGAAGCGATGTGCAGAGGCAATTCCTCTTGATGCA
TGGGTTCCAGCTGATGATGTAGTCCCTGTTTGCAAAGCTATATTAGAAGCTTATAGAGAT
CTTGGTACCCGAGGGAACAGGCAGAAAACAAGAATGATGTGGTTAATTGACGAACTGGGT
GTTGAAGGATTCAGGGCAGAAGTTGTGAAGAGAATGCCCCAAAAGAAGCTAGATAGAGAA
TCTTCAGAGGATTTGGTCCTGAAACAATGGGAAAGGAGAGAGTACCTTGGCGTGCATCCG
CAGAAACAGGAAGGATACAGCTTTGTTGGTCTTCACATTCCGGTTGGTCGTGTCCAAGCA
GATGACATGGACGAGCTAGCTCGTTTGGCTGATGAGTATGGTTCAGGAGAACTCCGGTTG
ACTGTTGAACAGAACATCATTATTCCCAACATCGAGAACTCAAAGATCGATGCATTACTC
AATGAGCCTCTCCTAAAGAACAGATTTTCACCTGATCCACCTATTCTCATGAGAAATTTG
GTGGCTTGTACTGGTAACCAATTCTGTGGGCAAGCAATAATCGAGACTAAAGCACGTTCA
ATGAAGATAACCGAGGAGGTTCAACGTCTAGTCTCTGTGACACAGCCAGTGAGGATGCAC
TGGACAGGTTGCCCAAATACATGTGGACAAGTTCAAGTTGCCGATATCGGATTCATGGGA
TGCCTGACTAGAAAGGAAGGCAAAACTGTTGAAGGTGCTGATGTTTTCTTGGGTGGCAGA
ATAGGGAGCGACTCGCATTTAGGAGAAGTTTATAAGAAGTCTGTACCATGTGAGGATTTG
GTACCAATAATCGTCGACTTACTAATTAACAACTTTGGTGCTGTTCCAAGAGAAAGAGAA
GAAACAGAGGAGTAA

Peptide Sequence

PEP ID

Solyc10g050890.2.1
PEP Infomation

nitrite reductase 2
Sequence

MTSFSVKFSATSLPNSNRFSKLHATPPQTVAVPSYGAAEIAAERLEPRVEQRDGYWVVKD
KFRQGINPAEKAKIEKEPMKLFTENGIEDLAKISLEEIEKSKLTKEDIDIRLKWLGLFHR
RKHHYGRFMMRLKLPNGVTTSDQTRYLGSVIRKYGKDGCGDVTTRQNWQIRGVVLPDVPE
ILKGLDEVGLTSLQSGMDNVRNPVGNPLAGIDLHEIVDTRPYTNLLSQYVTANFRGNVDV
TNLPRKWNVCVIGSHDLYEHPHINDLAYMPATKDGRFGFNLLVGGFFSPKRCAEAIPLDA
WVPADDVVPVCKAILEAYRDLGTRGNRQKTRMMWLIDELGVEGFRAEVVKRMPQKKLDRE
SSEDLVLKQWERREYLGVHPQKQEGYSFVGLHIPVGRVQADDMDELARLADEYGSGELRL
TVEQNIIIPNIENSKIDALLNEPLLKNRFSPDPPILMRNLVACTGNQFCGQAIIETKARS
MKITEEVQRLVSVTQPVRMHWTGCPNTCGQVQVADIGFMGCLTRKEGKTVEGADVFLGGR
IGSDSHLGEVYKKSVPCEDLVPIIVDLLINNFGAVPREREETEE*

Transcript Sequence

Transcript ID

Solyc10g050890.2.1
Transcript Infomation

nitrite reductase 2
Sequence

GTAATAACTTTGAAAGGATATCCTAGTCATTAGCACTTGTAATTTAGAAACAATAACGAC
CCTTTGGAACTTCCAAGAGTCCAAAAGCACCGTACCCCCCTACCCCACTTCACGACTACA
AAAATGGTCTTATTCTTCCATTTTCATCACCACCGGCACGATCACCGCTACCTCAATCGA
CTAAATTCTCAATTTTAAGTTGGTTTTGTAACTTAGTTGTTCTTTTTAATTTGTCGAAAT
GACTTCTTTTTCTGTTAAATTTTCAGCTACTTCACTTCCAAATTCTAATAGATTTTCCAA
ACTTCATGCTACTCCACCGCAGACGGTGGCGGTACCGTCGTACGGGGCGGCGGAGATAGC
TGCTGAAAGACTAGAGCCTAGAGTTGAGCAAAGAGATGGGTATTGGGTAGTTAAGGATAA
GTTCAGACAAGGCATAAATCCAGCTGAAAAGGCGAAGATTGAAAAGGAACCAATGAAACT
ATTCACTGAAAATGGTATCGAAGATCTTGCTAAGATCTCGCTTGAAGAGATCGAGAAATC
AAAGCTAACTAAAGAAGATATTGATATTCGCCTCAAGTGGCTTGGACTCTTCCATCGGAG
AAAACACCACTATGGTCGATTCATGATGCGATTGAAGCTTCCAAATGGAGTAACGACGAG
TGATCAAACTCGATATTTAGGTAGTGTGATTAGGAAATATGGGAAAGATGGATGTGGTGA
TGTGACTACAAGGCAAAATTGGCAGATTCGTGGGGTTGTGTTACCTGATGTGCCTGAGAT
TCTAAAGGGGCTTGATGAAGTTGGCTTGACTAGTCTGCAGAGTGGCATGGATAATGTTCG
AAATCCGGTGGGGAATCCTCTCGCAGGGATTGATCTTCATGAAATTGTAGACACAAGGCC
TTACACTAATTTGCTGTCCCAATATGTCACCGCCAATTTTCGTGGCAATGTGGATGTGAC
TAACTTGCCAAGGAAGTGGAATGTATGTGTAATAGGGTCACATGATCTTTATGAGCATCC
GCATATCAATGATCTTGCGTATATGCCTGCAACCAAAGATGGACGATTTGGATTCAACCT
GCTTGTGGGTGGATTCTTCAGTCCGAAGCGATGTGCAGAGGCAATTCCTCTTGATGCATG
GGTTCCAGCTGATGATGTAGTCCCTGTTTGCAAAGCTATATTAGAAGCTTATAGAGATCT
TGGTACCCGAGGGAACAGGCAGAAAACAAGAATGATGTGGTTAATTGACGAACTGGGTGT
TGAAGGATTCAGGGCAGAAGTTGTGAAGAGAATGCCCCAAAAGAAGCTAGATAGAGAATC
TTCAGAGGATTTGGTCCTGAAACAATGGGAAAGGAGAGAGTACCTTGGCGTGCATCCGCA
GAAACAGGAAGGATACAGCTTTGTTGGTCTTCACATTCCGGTTGGTCGTGTCCAAGCAGA
TGACATGGACGAGCTAGCTCGTTTGGCTGATGAGTATGGTTCAGGAGAACTCCGGTTGAC
TGTTGAACAGAACATCATTATTCCCAACATCGAGAACTCAAAGATCGATGCATTACTCAA
TGAGCCTCTCCTAAAGAACAGATTTTCACCTGATCCACCTATTCTCATGAGAAATTTGGT
GGCTTGTACTGGTAACCAATTCTGTGGGCAAGCAATAATCGAGACTAAAGCACGTTCAAT
GAAGATAACCGAGGAGGTTCAACGTCTAGTCTCTGTGACACAGCCAGTGAGGATGCACTG
GACAGGTTGCCCAAATACATGTGGACAAGTTCAAGTTGCCGATATCGGATTCATGGGATG
CCTGACTAGAAAGGAAGGCAAAACTGTTGAAGGTGCTGATGTTTTCTTGGGTGGCAGAAT
AGGGAGCGACTCGCATTTAGGAGAAGTTTATAAGAAGTCTGTACCATGTGAGGATTTGGT
ACCAATAATCGTCGACTTACTAATTAACAACTTTGGTGCTGTTCCAAGAGAAAGAGAAGA
AACAGAGGAGTAATCTAAAATCTTCAGAATGTACTTTTTATGATATTGAAATATTTCCAA
GGTACAGCATTGTAAGTTAGTAAAATAATCACAACATGAGATGTTGTTAACATGTTCATG
TGTGACATAGCATGATGCAAATACTTGAACTTGTTTCAAAATATAATCACATTGTGTATT
CTTTTGGAAATACTCATCCAAACTAAAAGGCTTTTGAATTGTTGAATTCCTAATAATACA
TTTTTTAAAATGTAATTTGATATTCATTTGTTTTGATT