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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g050757.1.1
CDS Infomation

Pectinacetylesterase family protein (AHRD V3.3 *** AT4G19420.2)
Sequence

ATGTGTGAATCAAATATTCCATATTTGAAGAGAAGAATGGTGACCAGTTTTCTGTTGTAT
TTTGTTTGTTTTCTGATTTTTGTTACAACAGAAGGTCTCCTTGTTAATATCACTATACTT
GAAAGTGCCGTTGTTGTGTTTATTATAGTTTGCTTGGATGGAACTCCACCAGCGTACCAT
CTTGATAGAGGATCAGGCTCAGGAGTGAATAGTTGGGTAATATCACTTGAGTTAAAGGGA
GGTGGATGGTGCCAAAATGTTACTTCTTGTCTTACAAGAAAGAATACCAGGTTGGGATCT
AGTGCAAAAATGGATCACCAACTTCCTTTCTCTGGGATGATGAGTAATGATCCCAAATTT
AATCCAGTAATTAATACAATTTTGAAAATTGTAGAATTTCATAGTTGGAACAGAGTTTCC
GTTAGATATTGTGATGGCGGATCCTTTACGGGAGATGTTGAAGCAATTGATCCTGTAAGT
CATATTTTGAATACTATATTAATTCTTCAGAGCTCCCAAGCTACAAGACTTCATTATAGA
GGGGCAAGGATATTCAAAGCTATTATGGAGGAATTGTTGGCCCAAGGAATGAAAAAATCT
CAAAATGTACAAGTCATATACATATATGCTATACTTTCTGGATGTTCAGCGGGAGGATTG
GCAACAATTTTGCATTGCGATAATTTCAGAATGTTATTACCAAATAATGTTAAAGTTAAA
TGCTTTTCTGATGCTGGTTATTTTATTCACCGGTCTAGCAACGATATTTCAGGGAAACCG
TACATTGAACAGTACTTCAATGATGTTGTCACTTTACATGGCTCAGCCAAAAGTTTGCCT
TCGTCATGTACTTCAAAGTTGAAACCAGCGAGCTCATCGGTGCAGTGCTTTTTTCCAGAA
AATGTGGCTCAACAAATTAAAACGCCACTTTTCATCATAAATGCAGCGTATGATCATTGG
CAAGTGAGTATTTTGGTGGCTCCTGGTAGTGATCCTAAGGGTGCCTGGACAAGCTGCAAA
GCTAATATAAAAAATTGTACACCAAATCAGCTCAAAATACTTCAAGTTTTGAACAATATT
TTTTATATAGGTTTCAGAAAGGATTTTTTAAAGGCATTGGATGGGCTAGGCCCATCTTCA
ACAAGAGGATATTACATCAACTCTTGCTTTTCACATTGCCAATCTCAACAACAAGCCTAT
TGGTTTGGCCTCAATTCACCTAGATTATTCAACAAGGTAGTACTAATTGGAGTAACTATA
GCTGAAGCAGTAAGAGATTGGTTTTTGGAGACAGATCAATATCGACATATTGATTGCCCT
TATCCTTGTGACAAAACATGTGTTGTAGACACTGATATAACTACTTCACAATACAAGTTA
TCCTGGGATTAGTTATGTTGGAATAATAAGTTATGCTACTCATGGATAGCGGGGGCAGAG
TTGATAAACACCAGTCATTGGTGA

Peptide Sequence

PEP ID

Solyc10g050757.1.1
PEP Infomation

Pectinacetylesterase family protein (AHRD V3.3 *** AT4G19420.2)
Sequence

MCESNIPYLKRRMVTSFLLYFVCFLIFVTTEGLLVNITILESAVVVFIIVCLDGTPPAYH
LDRGSGSGVNSWVISLELKGGGWCQNVTSCLTRKNTRLGSSAKMDHQLPFSGMMSNDPKF
NPVINTILKIVEFHSWNRVSVRYCDGGSFTGDVEAIDPVSHILNTILILQSSQATRLHYR
GARIFKAIMEELLAQGMKKSQNVQVIYIYAILSGCSAGGLATILHCDNFRMLLPNNVKVK
CFSDAGYFIHRSSNDISGKPYIEQYFNDVVTLHGSAKSLPSSCTSKLKPASSSVQCFFPE
NVAQQIKTPLFIINAAYDHWQVSILVAPGSDPKGAWTSCKANIKNCTPNQLKILQVLNNI
FYIGFRKDFLKALDGLGPSSTRGYYINSCFSHCQSQQQAYWFGLNSPRLFNKVVLIGVTI
AEAVRDWFLETDQYRHIDCPYPCDKTCVVDTDITTSQYKLSWD*LCWNNKLCYSWIAGAE
LINTSHW*

Transcript Sequence

Transcript ID

Solyc10g050757.1.1
Transcript Infomation

Pectinacetylesterase family protein (AHRD V3.3 *** AT4G19420.2)
Sequence

ATGTGTGAATCAAATATTCCATATTTGAAGAGAAGAATGGTGACCAGTTTTCTGTTGTAT
TTTGTTTGTTTTCTGATTTTTGTTACAACAGAAGGTCTCCTTGTTAATATCACTATACTT
GAAAGTGCCGTTGTTGTGTTTATTATAGTTTGCTTGGATGGAACTCCACCAGCGTACCAT
CTTGATAGAGGATCAGGCTCAGGAGTGAATAGTTGGGTAATATCACTTGAGTTAAAGGGA
GGTGGATGGTGCCAAAATGTTACTTCTTGTCTTACAAGAAAGAATACCAGGTTGGGATCT
AGTGCAAAAATGGATCACCAACTTCCTTTCTCTGGGATGATGAGTAATGATCCCAAATTT
AATCCAGTAATTAATACAATTTTGAAAATTGTAGAATTTCATAGTTGGAACAGAGTTTCC
GTTAGATATTGTGATGGCGGATCCTTTACGGGAGATGTTGAAGCAATTGATCCTGTAAGT
CATATTTTGAATACTATATTAATTCTTCAGAGCTCCCAAGCTACAAGACTTCATTATAGA
GGGGCAAGGATATTCAAAGCTATTATGGAGGAATTGTTGGCCCAAGGAATGAAAAAATCT
CAAAATGTACAAGTCATATACATATATGCTATACTTTCTGGATGTTCAGCGGGAGGATTG
GCAACAATTTTGCATTGCGATAATTTCAGAATGTTATTACCAAATAATGTTAAAGTTAAA
TGCTTTTCTGATGCTGGTTATTTTATTCACCGGTCTAGCAACGATATTTCAGGGAAACCG
TACATTGAACAGTACTTCAATGATGTTGTCACTTTACATGGCTCAGCCAAAAGTTTGCCT
TCGTCATGTACTTCAAAGTTGAAACCAGCGAGCTCATCGGTGCAGTGCTTTTTTCCAGAA
AATGTGGCTCAACAAATTAAAACGCCACTTTTCATCATAAATGCAGCGTATGATCATTGG
CAAGTGAGTATTTTGGTGGCTCCTGGTAGTGATCCTAAGGGTGCCTGGACAAGCTGCAAA
GCTAATATAAAAAATTGTACACCAAATCAGCTCAAAATACTTCAAGTTTTGAACAATATT
TTTTATATAGGTTTCAGAAAGGATTTTTTAAAGGCATTGGATGGGCTAGGCCCATCTTCA
ACAAGAGGATATTACATCAACTCTTGCTTTTCACATTGCCAATCTCAACAACAAGCCTAT
TGGTTTGGCCTCAATTCACCTAGATTATTCAACAAGGTAGTACTAATTGGAGTAACTATA
GCTGAAGCAGTAAGAGATTGGTTTTTGGAGACAGATCAATATCGACATATTGATTGCCCT
TATCCTTGTGACAAAACATGTGTTGTAGACACTGATATAACTACTTCACAATACAAGTTA
TCCTGGGATTAGTTATGTTGGAATAATAAGTTATGCTACTCATGGATAGCGGGGGCAGAG
TTGATAAACACCAGTCATTGGTGA