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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g049650.2.1
CDS Infomation

Histone deacetylase 6 (AHRD V3.3 *** W9SEY2_9ROSA)
Sequence

ATGACTCCATTGATTGAGGTTAAGAAGAAAAAAAGGGAGTGGAAGTCGGTAATTAGTGGA
TCCCCATTTCAACTTCGTCCCTGTAATTCCTTCAGATCCATGGCAACTGGAACTTCTTCA
TCGTCTTCACTTCCTGCTGATGAAGAAGAAGAGGAGATACTGATGCTATACGGGTCCGAA
TCAGGTTGGGTTGAGGCCAAAAGTCACTGTGATCACCTGGCTTCTTTGTCCTCTGATCTC
ACCCATATTCCAACTCCTGATACTCCTTGCAACAGGTGCCAACATCCAGCAGAGAACTGG
CTATGTTTGTGCTGCAAGGAGGTTCTTTGCAGTCGATTTGTTAATAAGCACATGCTCGAG
CATCACAAGCTGACTGATCACTCTTTAGCCCTCAGCTTTAGTGATCTATCAGTATGGTGT
TTCTCCTGCAATGCGTATTTAGATGCTCAAGTTATAATGCCGTTGCAGTCTGTTCATTTC
ACTGCCTACGTACTGAAGTTTAATGAGCCTCCACCTTTACGAGCAGTGGAGTGTGTACAT
ATTACAGATAACAAAGCAGACGGTTCTTCTACTTCTGGGAATTAA

Peptide Sequence

PEP ID

Solyc10g049650.2.1
PEP Infomation

Histone deacetylase 6 (AHRD V3.3 *** W9SEY2_9ROSA)
Sequence

MTPLIEVKKKKREWKSVISGSPFQLRPCNSFRSMATGTSSSSSLPADEEEEEILMLYGSE
SGWVEAKSHCDHLASLSSDLTHIPTPDTPCNRCQHPAENWLCLCCKEVLCSRFVNKHMLE
HHKLTDHSLALSFSDLSVWCFSCNAYLDAQVIMPLQSVHFTAYVLKFNEPPPLRAVECVH
ITDNKADGSSTSGN*

Transcript Sequence

Transcript ID

Solyc10g049650.2.1
Transcript Infomation

Histone deacetylase 6 (AHRD V3.3 *** W9SEY2_9ROSA)
Sequence

CAAAAAATTATTATTTGGAAAAAAAATAGGGGGAGTTTAAAAGTTACTATTATTTACCCT
ATGACTCCATTGATTGAGGTTAAGAAGAAAAAAAGGGAGTGGAAGTCGGTAATTAGTGGA
TCCCCATTTCAACTTCGTCCCTGTAATTCCTTCAGATCCATGGCAACTGGAACTTCTTCA
TCGTCTTCACTTCCTGCTGATGAAGAAGAAGAGGAGATACTGATGCTATACGGGTCCGAA
TCAGGTTGGGTTGAGGCCAAAAGTCACTGTGATCACCTGGCTTCTTTGTCCTCTGATCTC
ACCCATATTCCAACTCCTGATACTCCTTGCAACAGGTGCCAACATCCAGCAGAGAACTGG
CTATGTTTGTGCTGCAAGGAGGTTCTTTGCAGTCGATTTGTTAATAAGCACATGCTCGAG
CATCACAAGCTGACTGATCACTCTTTAGCCCTCAGCTTTAGTGATCTATCAGTATGGTGT
TTCTCCTGCAATGCGTATTTAGATGCTCAAGTTATAATGCCGTTGCAGTCTGTTCATTTC
ACTGCCTACGTACTGAAGTTTAATGAGCCTCCACCTTTACGAGCAGTGGAGTGTGTACAT
ATTACAGATAACAAAGCAGACGGTTCTTCTACTTCTGGGAATTAATCCTTTGTTCTTCTC
TTTGATGCCTGTGATGTTTAGCGAAAACTAATTTGGATCATGGTGTTTTTATCTCGATGT
TGGCACATTAACTTCTTATTTCTGTGCTTCGTAAGCAAAATAGTTTCTTGAGGGAAGAGG
AACAATGTAAAATCTGTCTCAACTCTAAGGAAATATAATTAGAGTTTAGAACTGTCTGGC
TGCTGGTAGAAATTGGGTTGCCCAATTCTGGACATCTTTGTTAAAGGCTTGCAAAATTGA
CTCAAGAAGAGGTTATTAAGTACTTGTGTAAAGTGGATATGATTATACTTTTCAAAATTG
CAAAGGGGTAAAGAAACGGAAATTGAAGAGAGCTCAATTCACAGCATTCAATTTATACTT
GTATTGTGTCTTATGTCAATAAAAA