Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g049600.2.1
CDS Infomation

Progesterone 5-beta-reductase (AHRD V3.3 *** D6NIX2_ATRBE)
Sequence

ATGAATAAGAAAATTTTTGATGAAGATGAAAATTTTCAAAGTGTCGCTCTAATCATCGGA
GTCACTGGCATCGTCGGCAATAGTCTCGCCGCGATCCTCCCTTGTGCCGATACTCCTGGC
GGTCCTTGGAAGGTCTACGGCGTTGCACGCCGCCCTAGACCACCGTGGAATGTCAACGAT
CCGATTGAGTATATCCAATGTGACATATCGAATCGAGAAGAAACCCAATCTAGACTCACT
CTTCTCACTGATATCACTCACGTTTTCTATGTTACTTGGGCGAATCGGCCAACAGAGGTT
GAAAACTGTGAAATCAACGGAAAAATGTTACAAAATGTGCTCGATGCGATTATCCCCAAT
TGCCCCAATTTGTGTCATATCTGTTTGCAAACGGGTCTAAAACACTATCATGGTTCATTT
GAATTGTTTGGAAAAATAGCACATGATACCCCATATCACGAGGGTTTGCCCCGTTTACCC
GTACCCAATTTCTATTACACCCTGGAGGATATCTTGTTCGAGGAGGTGAAGAAAAAAGAA
GGATTAACATGGTCAATTCATAGACCTGGGTTGATTTTTGGATTTTCACCGTATAGTATG
ATGAACATTATTGGAACTCTTTGTGTTTATGCAGCTATATGTAAACACGAGGGGTTGCCG
TTGAGATTTCCAGGCTCTAAATGTGGGTGGGATGGTTATTCGATTTGTTCAGATGCAGAT
TTAATTGCGGAGCAGCATATCTGGGCATCAGTGGATCCAAACGCGAAGAATGAGGCGTTT
AATATAAGCAATGGGGATGTGTTCCACTGGAAGCATTTGTGGAAAGTTTTAGGTAAGGAG
TTTGAAGTGGAAATTGAAGAATTTGATGAAAATAAGAGATGGAGACTTGAGGAGATGATG
AAGGATAAAGGAAAAATTTGGGATGAGATTGTGGAGGAGAATGGATTGGTAGAAAGTAAA
TTGGAGGAGATTGGAGGTTGGTGGTTTGTTGATCTTGTTCTCAATGAAGAGTGTCCATTG
GATACTATGAATAAGAGCAAGGAACATGGTTTTTTGGGTTTTAGAAACTCCAAAAATGCC
TTCATTTCATGGATTTATAAGATCAAAGCTTCCAAAATTGTTCCTTAG

Peptide Sequence

PEP ID

Solyc10g049600.2.1
PEP Infomation

Progesterone 5-beta-reductase (AHRD V3.3 *** D6NIX2_ATRBE)
Sequence

MNKKIFDEDENFQSVALIIGVTGIVGNSLAAILPCADTPGGPWKVYGVARRPRPPWNVND
PIEYIQCDISNREETQSRLTLLTDITHVFYVTWANRPTEVENCEINGKMLQNVLDAIIPN
CPNLCHICLQTGLKHYHGSFELFGKIAHDTPYHEGLPRLPVPNFYYTLEDILFEEVKKKE
GLTWSIHRPGLIFGFSPYSMMNIIGTLCVYAAICKHEGLPLRFPGSKCGWDGYSICSDAD
LIAEQHIWASVDPNAKNEAFNISNGDVFHWKHLWKVLGKEFEVEIEEFDENKRWRLEEMM
KDKGKIWDEIVEENGLVESKLEEIGGWWFVDLVLNEECPLDTMNKSKEHGFLGFRNSKNA
FISWIYKIKASKIVP*

Transcript Sequence

Transcript ID

Solyc10g049600.2.1
Transcript Infomation

Progesterone 5-beta-reductase (AHRD V3.3 *** D6NIX2_ATRBE)
Sequence

ATGAATAAGAAAATTTTTGATGAAGATGAAAATTTTCAAAGTGTCGCTCTAATCATCGGA
GTCACTGGCATCGTCGGCAATAGTCTCGCCGCGATCCTCCCTTGTGCCGATACTCCTGGC
GGTCCTTGGAAGGTCTACGGCGTTGCACGCCGCCCTAGACCACCGTGGAATGTCAACGAT
CCGATTGAGTATATCCAATGTGACATATCGAATCGAGAAGAAACCCAATCTAGACTCACT
CTTCTCACTGATATCACTCACGTTTTCTATGTTACTTGGGCGAATCGGCCAACAGAGGTT
GAAAACTGTGAAATCAACGGAAAAATGTTACAAAATGTGCTCGATGCGATTATCCCCAAT
TGCCCCAATTTGTGTCATATCTGTTTGCAAACGGGTCTAAAACACTATCATGGTTCATTT
GAATTGTTTGGAAAAATAGCACATGATACCCCATATCACGAGGGTTTGCCCCGTTTACCC
GTACCCAATTTCTATTACACCCTGGAGGATATCTTGTTCGAGGAGGTGAAGAAAAAAGAA
GGATTAACATGGTCAATTCATAGACCTGGGTTGATTTTTGGATTTTCACCGTATAGTATG
ATGAACATTATTGGAACTCTTTGTGTTTATGCAGCTATATGTAAACACGAGGGGTTGCCG
TTGAGATTTCCAGGCTCTAAATGTGGGTGGGATGGTTATTCGATTTGTTCAGATGCAGAT
TTAATTGCGGAGCAGCATATCTGGGCATCAGTGGATCCAAACGCGAAGAATGAGGCGTTT
AATATAAGCAATGGGGATGTGTTCCACTGGAAGCATTTGTGGAAAGTTTTAGGTAAGGAG
TTTGAAGTGGAAATTGAAGAATTTGATGAAAATAAGAGATGGAGACTTGAGGAGATGATG
AAGGATAAAGGAAAAATTTGGGATGAGATTGTGGAGGAGAATGGATTGGTAGAAAGTAAA
TTGGAGGAGATTGGAGGTTGGTGGTTTGTTGATCTTGTTCTCAATGAAGAGTGTCCATTG
GATACTATGAATAAGAGCAAGGAACATGGTTTTTTGGGTTTTAGAAACTCCAAAAATGCC
TTCATTTCATGGATTTATAAGATCAAAGCTTCCAAAATTGTTCCTTAG