Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g047670.2.1
CDS Infomation

HVA22-like protein (AHRD V3.3 *-* M0ZZ84_SOLTU)
Sequence

ATGGATTTTCTCAGATTTTCCCTTCACTTCATCGATTGCTTAGCCTGGCCGGTAGTTGCT
CTGGGCTATCCGATATGTGCATCAATACGAGCAATTGAAACTGGTTCCAAGTATCACATG
AGGAAGCTCGTCATATATTGGACCATATTTTCCTTTTTTTCTCTCTTCCAACACCTATTT
GACAAACTTATCCAATGGGTTCCTCTGTGGCCATATATAAAATTAATTACCATATGTTGG
TTGGTGATACCGCGGTTTAATGGGGCATGTTATCTTTATGAAGTTCTTGTTCGTCCATGT
TTACTCGTTAAATGGCACGATAGTATCAGTCAGTTTAATAGTTCTTGTTATGTTTATCTA
CGCCTTTTATGTTTGTGCTTGTCTGTCAACCTTCGAACTGTTGCCGACTGGTTTAACAAG
CCAATGGAGGATCGATCTCTCAAGAATGAAACATTTCTGTCTGTGGTAGAGAGGTATCTC
GAAGAAAATGGATCGGATGCTCTGGAGAAACTTATTGCAAACAAGTATAAGGATTATAGT
TCGAAACATCATGCAGAAGAGATCAAGCCTACTGATACTAGTGATGAAGCAGGAAGGATT
ACCCCCAACCAGACACAATGTGAAGGGAGTGGTCCTGTTTGGGAAGATATCACAGTGATG
GAGCATATGGCAAAACATGAAGCAGCTGAGCCTAAACAGGTTAAGAGTGTGAAGGAAAAT
CCAATTATAATTGAGCAGAAAATGACAGGACTGCAGGTCAAGGAATTGGTAGTTCCAGCA
GATGCTGAAGAGATCAAACTTCCAGAGGTAATTTCTCCAAATAGAGTTCAGACAGAGTGG
ACTTGTGCATTATGCCAAATGACAACCACCTCAGAGCAAAACATGAAGTCCCATCTTAAC
GGAAGGAAACATAAATCCAAGTATGAGGCGCTGAAAATTTGCGAACAAACTCCCAAAAGC
AATGGAAGTTTACCAGTTCCAACAAAGTCAAATCAGCTTAATCTGGAGCAAGTAAAACAT
GCAGCTGCAGCACAACCATTTCACAGTACTAATGAAGCAGCTGAGCCTAAAGAGGTTAAA
AGTGTGAAGGAACATCCAATTCAGATTGAGAAGAAAACAACAGGTGTGCAGACCAAGGAT
ACAGCATTTCCAGCAGAGGCCAAGGAGATTAAACTCCCAGAAATCGATTCTGTAAAGAAT
GTTAAGACAGAGTGGACTTGTGCAGTATGTCAAGTGACAACTACCTCAAAGGGTGACTTG
AAGTGCCATCTTCTAGGGACGAGACATAGGATAAAGTGTGAAGAGCTGAAGAGAACGACC
AAAACTGAAAGAAACCCACCTTCTACTTCAAATATGCCAGAGCTTAAGCAGGAGCAAGTT
AAACATGCACTTGCAGCACAATACAAGAACAGCACTAACAAAAAACTGAAAGAAAATGTC
CAACTAGGAGCTACTACTGGGCAACATCAAAGGCAGACACAAGTGAAGAATGCTGGTGGT
GCTACTCATAATTCTAAGCTGTGGTGTAGTTTTTGTGACATTAGGTGCCCTGATGAGATT
GCTATGGCTGCACATCTTAACGGTAAGAAGCACTTGGCAAAACTTCAAGAAAGAATGAGT
TTAACTACTGGCACATGGGCTTTGAATTATGCAAATATGCAATTTTACCAGGGTATTTGA

Peptide Sequence

PEP ID

Solyc10g047670.2.1
PEP Infomation

HVA22-like protein (AHRD V3.3 *-* M0ZZ84_SOLTU)
Sequence

MDFLRFSLHFIDCLAWPVVALGYPICASIRAIETGSKYHMRKLVIYWTIFSFFSLFQHLF
DKLIQWVPLWPYIKLITICWLVIPRFNGACYLYEVLVRPCLLVKWHDSISQFNSSCYVYL
RLLCLCLSVNLRTVADWFNKPMEDRSLKNETFLSVVERYLEENGSDALEKLIANKYKDYS
SKHHAEEIKPTDTSDEAGRITPNQTQCEGSGPVWEDITVMEHMAKHEAAEPKQVKSVKEN
PIIIEQKMTGLQVKELVVPADAEEIKLPEVISPNRVQTEWTCALCQMTTTSEQNMKSHLN
GRKHKSKYEALKICEQTPKSNGSLPVPTKSNQLNLEQVKHAAAAQPFHSTNEAAEPKEVK
SVKEHPIQIEKKTTGVQTKDTAFPAEAKEIKLPEIDSVKNVKTEWTCAVCQVTTTSKGDL
KCHLLGTRHRIKCEELKRTTKTERNPPSTSNMPELKQEQVKHALAAQYKNSTNKKLKENV
QLGATTGQHQRQTQVKNAGGATHNSKLWCSFCDIRCPDEIAMAAHLNGKKHLAKLQERMS
LTTGTWALNYANMQFYQGI*

Transcript Sequence

Transcript ID

Solyc10g047670.2.1
Transcript Infomation

HVA22-like protein (AHRD V3.3 *-* M0ZZ84_SOLTU)
Sequence

ATTAGTTTTTTTTTCAATTCTGTCCAAATTTTCTTTTACTAATAGACTCTACCAAATAAC
CTCTAAACTAATCTTAACAACTATTAAAATACAATCCAATAATAGATATTATATAGAACT
TTAATATAGATAAATTTTATAAACTTTAATTTCATTCATTAGTTTGATCAATATGTAGGC
CAAAATTAAAAAAAATGTAGTTGCAGCACAAGTTCCTTCATGATTAAGGATATGATGGGA
CGATCAATATCAATAGGTACACATATGTGAAACCAAAAAGGTGAAGGAATCACATTAATT
ACTATGGTGACTCAACTTTTATAAATTAGGAGATGTTAATTACAATTGGAAAAAACAAAA
TAAAATAAAAACTCAACGCTTTTATTTGATTGGAATATAGAAAGACCAACGATTCAATTC
CAAAGTTAGCCTTGGCTTTCCACTTTTCAAGTACAACATTAAGAGGGTATTTCTGTTATT
AATAGGAAAAAAAACACTTATTTTGTAAACTGTTCACTTGTTTTTCCCTCTTCAGAAAGT
CTATTTTCTTTTGTGATCATAAAACTCCAGTTGAACTGAGAAGAGTAAATTTTCCAGAAT
GGATTTTCTCAGATTTTCCCTTCACTTCATCGATTGCTTAGCCTGGCCGGTAGTTGCTCT
GGGCTATCCGATATGTGCATCAATACGAGCAATTGAAACTGGTTCCAAGTATCACATGAG
GAAGCTCGTCATATATTGGACCATATTTTCCTTTTTTTCTCTCTTCCAACACCTATTTGA
CAAACTTATCCAATGGGTTCCTCTGTGGCCATATATAAAATTAATTACCATATGTTGGTT
GGTGATACCGCGGTTTAATGGGGCATGTTATCTTTATGAAGTTCTTGTTCGTCCATGTTT
ACTCGTTAAATGGCACGATAGTATCAGTCAGTTTAATAGTTCTTGTTATGTTTATCTACG
CCTTTTATGTTTGTGCTTGTCTGTCAACCTTCGAACTGTTGCCGACTGGTTTAACAAGCC
AATGGAGGATCGATCTCTCAAGAATGAAACATTTCTGTCTGTGGTAGAGAGGTATCTCGA
AGAAAATGGATCGGATGCTCTGGAGAAACTTATTGCAAACAAGTATAAGGATTATAGTTC
GAAACATCATGCAGAAGAGATCAAGCCTACTGATACTAGTGATGAAGCAGGAAGGATTAC
CCCCAACCAGACACAATGTGAAGGGAGTGGTCCTGTTTGGGAAGATATCACAGTGATGGA
GCATATGGCAAAACATGAAGCAGCTGAGCCTAAACAGGTTAAGAGTGTGAAGGAAAATCC
AATTATAATTGAGCAGAAAATGACAGGACTGCAGGTCAAGGAATTGGTAGTTCCAGCAGA
TGCTGAAGAGATCAAACTTCCAGAGGTAATTTCTCCAAATAGAGTTCAGACAGAGTGGAC
TTGTGCATTATGCCAAATGACAACCACCTCAGAGCAAAACATGAAGTCCCATCTTAACGG
AAGGAAACATAAATCCAAGTATGAGGCGCTGAAAATTTGCGAACAAACTCCCAAAAGCAA
TGGAAGTTTACCAGTTCCAACAAAGTCAAATCAGCTTAATCTGGAGCAAGTAAAACATGC
AGCTGCAGCACAACCATTTCACAGTACTAATGAAGCAGCTGAGCCTAAAGAGGTTAAAAG
TGTGAAGGAACATCCAATTCAGATTGAGAAGAAAACAACAGGTGTGCAGACCAAGGATAC
AGCATTTCCAGCAGAGGCCAAGGAGATTAAACTCCCAGAAATCGATTCTGTAAAGAATGT
TAAGACAGAGTGGACTTGTGCAGTATGTCAAGTGACAACTACCTCAAAGGGTGACTTGAA
GTGCCATCTTCTAGGGACGAGACATAGGATAAAGTGTGAAGAGCTGAAGAGAACGACCAA
AACTGAAAGAAACCCACCTTCTACTTCAAATATGCCAGAGCTTAAGCAGGAGCAAGTTAA
ACATGCACTTGCAGCACAATACAAGAACAGCACTAACAAAAAACTGAAAGAAAATGTCCA
ACTAGGAGCTACTACTGGGCAACATCAAAGGCAGACACAAGTGAAGAATGCTGGTGGTGC
TACTCATAATTCTAAGCTGTGGTGTAGTTTTTGTGACATTAGGTGCCCTGATGAGATTGC
TATGGCTGCACATCTTAACGGTAAGAAGCACTTGGCAAAACTTCAAGAAAGAATGAGTTT
AACTACTGGCACATGGGCTTTGAATTATGCAAATATGCAATTTTACCAGGGTATTTGAAG
GTGTTTGGTCTATTAGGTTGAAGTAACTGTGTTTGATTATCAACACTGAAATGTAGTTGC
TTACTCACTGGGAAAGGACAAACAGGAAAAGTTTATGTCGACAAGTGAGGTCTGTGTATA
GTCATTTAGTATGAGGAATCAGAGCTGCTAGTTTTTAACTTGGCTTTTTGTTTCTTCATA
TCTGTTTTATATAGTTGTCTTTTATGCAAATTTTACCAGCTATAGAGGTTTTACTTCATA
TCATTTATATGGACTTTATTCATAGTGCGAAGTGAAGAGCTAAACATTAAGAAAAAAATT
CACACTGGGAGGGAGTTGTGGGCATGGTGTAGGTACTTTAGATTTCGAT