Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g047530.2.1
CDS Infomation	Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT5G64330.1)
Sequence	ATGTGGGAATCAGAAAGTGAGTCTGTTAGTGGTAGAGACTATGGAAATGGTGTTCTCAAC AACACCAAACATGGGGTCAAGACTGATGGTTTTGAGCAAAAAGGACAGTCTTGGTATGTA GCAACTGATATTCCCAGTGACCTTTTAGTTCAAATTGGAGATGTTAGTTTCCACTTACAT AAGTATCCTTTGCTTTCTAGAAGTGGAAAGATGAACAGAATCATATATGAAACAAGGGAT GAAGAATTGAGCAGAATAGCTTTAAATGACTTACCAGGTGGATGGGAGGCATTTGAGTTA GCTGCAAAATTCTGTTATGGAATTGCTGTTGATCTCACAGCAACCAATATCTCCGGTTTA CGATGTGCAGCGGAGTACTTAGAAATGACTGAGGACTTAGAAGAAGGCAATCTAATATTC AAGACTGAAGCTTTTCTAAGTTATGTCGTTTTATCATCATGGAGGGACTCTATACTGGTG TTGAAGAGTTGTGAAAGGTTATCACCATGGGCTGAAAACCTTCAAATTGTTCGAAGATGC AGCGAGTCAATTGCATGGAAAGCGTGTGCCAATCCAAAAGGAATAAAATGGCAATACACT GGCAGACTACCTACTAGTGTTTCCAGCCCTAAATGGAATGAAATGAAGGATTCCAGTCCG AGCAGAAACCAGCAATTAGTACCCCCTGATTGGTGGTTCGAGGATGTCTCTATTCTCAGG ATTGATCACTTTGTCAGAGTCATTACTGCTATTAAGGTAAAAGGCATGCGACATGAACTG ATTGGTGCTGTTCTTATGCACTATGCTACTAAATGGATCCCGGGGCTAATTAAAGAAGGA TCCGGATCGTTGGATGATTGTAGCAACAGCAGTACTAGTAATGGCAGTAGCAGCAGTAGC TGGAAAGGAGGTCTTCATATGATAGTGTCAGGATCTAGAGAGGAAGTACCAACTATTCAA GCCAAAGATCAGAGGATGATTATCGAAAGCCTAATTAGCATAATCCCACAACAGAAGGAC AGCGTCTCGTGTAGCTTCCTTCTACGTCTTTTGAGAATGGCAAACCTGCTGAAAGTGGCT CCAGCACTTGTAACAGAATTGGAGAAACGAGTCGGGATGCAGTTTGAGCAGGCTACCTTA GCTGATCTACTCATACCGTCTTACAATAAAAGTGAGACATTGTATGATGTTGATCTTGTT CAGAGGCTTTTGGAACATTTCTTAGTTCAAGAGCAAACAGAAAGTTCAAGCCCTAGTAGA AGTTCATTCTCTGATAAGCATATGCATGATGCAAATCAAAGGGGTGCTAATCTCAACGCC AAGATGAGAGTCGCAAAGCTTGTAGACAGTTATCTCACTGAAGTATCCAGAGATCGAAAC CTTTCCTTGACAAAATTTCAGGTCTTGGCTGAGGCTTTACCAGAATCAGCAAGAACTTGT GATGATGGATTGTATCGTGCAATTGATTCGTATCTTAAGGCCCATCCAACTCTGTCAGAA CACGAAAGAAAGCGGCTCTGCAGGGTGATGGATTGCCAAAAACTGTCTATTGATGCTTGC ATGCACGCTGCTCAGAACGAAAGGCTTCCACTACGAGTAGTGGTGCAAGTCCTCTTTTCT GAGCAGGTAAAGATCAGCAATGCAATATCCAGCAGTTCACTGAAAGATGCAGGAGAATCT CATTACCAACCCCTAGTATCAAACCGCAAAACATTGCTCGAAGCAACACCACAATCATTT CAAGAGGGATGGACTACAGCCAAAAAAGACATCAACACTCTTAAATTTGAACTCGATACT GTGAAAGCTAAGTATGTTCAACTACAAAATGACATGGAAAACTTGCAAAAACAGTTTGAT AAGATCACAAAACCAAAACAAGGATCGGGTTGGACTGCAGGATGGAAAAAGTTAAGCAAG CTCACAAAGATGACACATTTAGAATCGCAAGAAAACAGTCCACACGCCCCAAATGCAGAA CCGACAAGGAAGACCCCGAGAAGATGGAGAAATTCCATTTCCTGA

Peptide Sequence

PEP ID	Solyc10g047530.2.1
PEP Infomation	Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT5G64330.1)
Sequence	MWESESESVSGRDYGNGVLNNTKHGVKTDGFEQKGQSWYVATDIPSDLLVQIGDVSFHLH KYPLLSRSGKMNRIIYETRDEELSRIALNDLPGGWEAFELAAKFCYGIAVDLTATNISGL RCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSILVLKSCERLSPWAENLQIVRRC SESIAWKACANPKGIKWQYTGRLPTSVSSPKWNEMKDSSPSRNQQLVPPDWWFEDVSILR IDHFVRVITAIKVKGMRHELIGAVLMHYATKWIPGLIKEGSGSLDDCSNSSTSNGSSSSS WKGGLHMIVSGSREEVPTIQAKDQRMIIESLISIIPQQKDSVSCSFLLRLLRMANLLKVA PALVTELEKRVGMQFEQATLADLLIPSYNKSETLYDVDLVQRLLEHFLVQEQTESSSPSR SSFSDKHMHDANQRGANLNAKMRVAKLVDSYLTEVSRDRNLSLTKFQVLAEALPESARTC DDGLYRAIDSYLKAHPTLSEHERKRLCRVMDCQKLSIDACMHAAQNERLPLRVVVQVLFS EQVKISNAISSSSLKDAGESHYQPLVSNRKTLLEATPQSFQEGWTTAKKDINTLKFELDT VKAKYVQLQNDMENLQKQFDKITKPKQGSGWTAGWKKLSKLTKMTHLESQENSPHAPNAE PTRKTPRRWRNSIS*

Transcript Sequence

Transcript ID	Solyc10g047530.2.1
Transcript Infomation	Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT5G64330.1)
Sequence	CTCTTTCGAATAAATCACTTCCCTCTAGACTATCTTGTCGCTAATACATCTCCGGATCCT ATCTCTGTATTTAGATGCCGTATGCCCTCTCTGTTACACCCCTATGTGACAGAGTTTAAA GAATTAGAGAAGTTGAATTATTAGTGAAGAGATGGAAAAGGAACAGCTGAGTATTATGCC CATTACTTCACAGGTTGTAAGAGGGCCTTGAAAATTGTCGTGAAAAACGACAATTTTACA TAATTCCAAATATCCCCATGTGAAATTCTTCCTCTTTACTACTAGCTTATCTTCTCCCTC TCTTTATTTGAAGTACTTTGTGTCAGAAAACTCTGAGAACCTCTCACAATGTGGGAATCA GAAAGTGAGTCTGTTAGTGGTAGAGACTATGGAAATGGTGTTCTCAACAACACCAAACAT GGGGTCAAGACTGATGGTTTTGAGCAAAAAGGACAGTCTTGGTATGTAGCAACTGATATT CCCAGTGACCTTTTAGTTCAAATTGGAGATGTTAGTTTCCACTTACATAAGTATCCTTTG CTTTCTAGAAGTGGAAAGATGAACAGAATCATATATGAAACAAGGGATGAAGAATTGAGC AGAATAGCTTTAAATGACTTACCAGGTGGATGGGAGGCATTTGAGTTAGCTGCAAAATTC TGTTATGGAATTGCTGTTGATCTCACAGCAACCAATATCTCCGGTTTACGATGTGCAGCG GAGTACTTAGAAATGACTGAGGACTTAGAAGAAGGCAATCTAATATTCAAGACTGAAGCT TTTCTAAGTTATGTCGTTTTATCATCATGGAGGGACTCTATACTGGTGTTGAAGAGTTGT GAAAGGTTATCACCATGGGCTGAAAACCTTCAAATTGTTCGAAGATGCAGCGAGTCAATT GCATGGAAAGCGTGTGCCAATCCAAAAGGAATAAAATGGCAATACACTGGCAGACTACCT ACTAGTGTTTCCAGCCCTAAATGGAATGAAATGAAGGATTCCAGTCCGAGCAGAAACCAG CAATTAGTACCCCCTGATTGGTGGTTCGAGGATGTCTCTATTCTCAGGATTGATCACTTT GTCAGAGTCATTACTGCTATTAAGGTAAAAGGCATGCGACATGAACTGATTGGTGCTGTT CTTATGCACTATGCTACTAAATGGATCCCGGGGCTAATTAAAGAAGGATCCGGATCGTTG GATGATTGTAGCAACAGCAGTACTAGTAATGGCAGTAGCAGCAGTAGCTGGAAAGGAGGT CTTCATATGATAGTGTCAGGATCTAGAGAGGAAGTACCAACTATTCAAGCCAAAGATCAG AGGATGATTATCGAAAGCCTAATTAGCATAATCCCACAACAGAAGGACAGCGTCTCGTGT AGCTTCCTTCTACGTCTTTTGAGAATGGCAAACCTGCTGAAAGTGGCTCCAGCACTTGTA ACAGAATTGGAGAAACGAGTCGGGATGCAGTTTGAGCAGGCTACCTTAGCTGATCTACTC ATACCGTCTTACAATAAAAGTGAGACATTGTATGATGTTGATCTTGTTCAGAGGCTTTTG GAACATTTCTTAGTTCAAGAGCAAACAGAAAGTTCAAGCCCTAGTAGAAGTTCATTCTCT GATAAGCATATGCATGATGCAAATCAAAGGGGTGCTAATCTCAACGCCAAGATGAGAGTC GCAAAGCTTGTAGACAGTTATCTCACTGAAGTATCCAGAGATCGAAACCTTTCCTTGACA AAATTTCAGGTCTTGGCTGAGGCTTTACCAGAATCAGCAAGAACTTGTGATGATGGATTG TATCGTGCAATTGATTCGTATCTTAAGGCCCATCCAACTCTGTCAGAACACGAAAGAAAG CGGCTCTGCAGGGTGATGGATTGCCAAAAACTGTCTATTGATGCTTGCATGCACGCTGCT CAGAACGAAAGGCTTCCACTACGAGTAGTGGTGCAAGTCCTCTTTTCTGAGCAGGTAAAG ATCAGCAATGCAATATCCAGCAGTTCACTGAAAGATGCAGGAGAATCTCATTACCAACCC CTAGTATCAAACCGCAAAACATTGCTCGAAGCAACACCACAATCATTTCAAGAGGGATGG ACTACAGCCAAAAAAGACATCAACACTCTTAAATTTGAACTCGATACTGTGAAAGCTAAG TATGTTCAACTACAAAATGACATGGAAAACTTGCAAAAACAGTTTGATAAGATCACAAAA CCAAAACAAGGATCGGGTTGGACTGCAGGATGGAAAAAGTTAAGCAAGCTCACAAAGATG ACACATTTAGAATCGCAAGAAAACAGTCCACACGCCCCAAATGCAGAACCGACAAGGAAG ACCCCGAGAAGATGGAGAAATTCCATTTCCTGATCAATCCAAATGTTATAGAGAAAAGAC TACCAGATCATACACAATACTAAATTCTGTGTGTTCGAAATTCTCAGTTTCTTTCCTATC TAAGAGAGTAGTCAAAGGGTTACTTTTAATTTACTTGATTATAGCATCAACTCATTCCTA GCTTTTTGGTGTTTGTTTTTTCTGTATGATTTGGTTTTCGAGAGTGAAGTGAGAATATAT ATTGTTGCATATATAGTTTCCCTGACATGCAATGTTGCTATTTGTGTTCGACTTTCAAAC TATGACAACTTGACAAGACAATGTATCACCCTTAGTCAAATCAAGTGTATG