Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g047320.2.1
CDS Infomation	Disease resistance protein (CC-NBS-LRR class) family protein (AHRD V3.3 *** A0A072TW48_MEDTR)
Sequence	ATGGCGAACGTAGCAGTGGAATTTCTGGTTGAGAACTTGATGCAGTTGCTGCGGGACAAC GTAGAGCTAATTAGTGGAGTTAAAGAGGCTGCTGAGAGTCTACTTCAAGATCTAAATGAT TTCAATGCTTTTCTTAAGCAAGCTGCCAAGTGTCACATCAACGAGAACGAAGTCCTCAGA GAACTTGTTAAGAAAATAAGAACAGTCGTTAACTCTGCTGAAGATGCTATTGATAAATTT GTTATTGAAGCTAAGCTACACAAGGATAAGGGTGTCACCAGAGTATTAGATCTTCCCCAT TATAAAAGAGTCAAAGAGGTAGCTGGTGAGATCAAAGCTATACGAAACAAAGTCAGAGAG ATCCGACAGACTGATGCCATTGGACTTCAGGCCCTTCAAGATGATGATTTATCTGCTAGA GGTTCCGAAGAAAGAAAGCCTCCAGTGGTAGAGGAAGATGACGTGGTTGGATTTGACGAA GAAGCAGATATTGTAATCAACCGCCTTCTTGGAGAATCGAATCATCTAGAAGTTGTTCCA GTTGTTGGTATGCCTGGTCTCGGCAAAACGACCCTAGCAAATAAGATTTACAAGCATCCT AAAATCGGGTATGAGTTTTTTACTCGTATTTGGGTTTATGTGTCTCAATCATACAGGAGA AGAGAATTATTTCTCAACATCATCAGCAAATTCACTCGAAATACAAAACAATATCATGGG ATGTGTGAGGAGGATTTGGCTGATGAAATACAAGAATTCTTGGGAAAGGGAGGAAAATAC TTGGTTGTGTTGGATGACGTATGGTCGGATGAAGCTTGGGAACGTATCAAGATAGCATTC CCAAATAACAACAAACCGAATCGAGTATTGTTGACCACTCGAGATTCCAAAGTGGCTAAA CAATGCAATCCCATACCTCATGATCTAAAATTTCTGACTGAAGATGAAAGTTGGATATTA CTGGAGAAGAAGGTTTTTCACAAGGACAAATGTCCTCCTGAATTGGTACTATCTGGAAAG AGCATAGCAAAAAAATGCAAGGGACTACCACTTGCGATTGTTGTTATTGCAGGAGCACTA ATAGGGAAAGGCAAGACACCAAGAGAGTGGAAACAAGTGGATGATAGTGTTAGTGAACAC CTCATAAATAGAGACCACCCTGAGAATTGTAACAAACTGGTGCAAATGAGTTATGATCGT TTACCTTACGACTTGAAAGCATGCTTTTTATATTGTAGTGCATTTCCTGGAGGCTTTCAA ATCCCTGCTTGGAAGTTAATCCGTTTGTGGATTGCGGAAGGATTCATACAGTATAAAGGC CATTTATCTCTTGAGTGTAAAGGAGAGGACAACTTGAATGATCTCATCAATAGGAATCTA GTGATGGTAATGGAAAGAACTTCTGATGGTCAAATCAAAACATGTCGTCTTCATGACATG TTGCACGAGTTTTGCAGGCAAGAAGCTATGAAGGAAGAAAATCTTTTCCAAGAAATAAAG TTAGGATCTGAGCAATATTTTCCTGGAAAACGAGAACTATCCACCTACCGTCGCTTATGC ATCCATTCCTCAGTTTTGGATTTTTTCTCTACGAAACCTTCAGCTGAACATGTCAGGTCA TTCTTATCTTTTTCTTCGAAAAAGATTGAGATGCCATCTGCTGACATCCCAACCATACCC AAAGGCTTTCCGTTGCTAAGGGTTTTGGATGTAGAATCAATCAACTTCAGTCGCTTTTCC AGGGAGTTTTACCAGTTATATCATTTGAGGTATGTTGCTTTTTCATCTGACTCAATCAAG ATTCTTCCTAAACTCATGGGAGAACTTTGGAACATCCAAACCATCATAATTAACACGCAA CAACGCACTCTTGATATTCAAGCAAACATATGGAATATGGAACGACTAAGGCATCTGCAC ACTAACTCTTCCGCTAAGTTGCCTGTCCCTGTTGCTCCAAAAAATAGTAAGGTTACATTG GTAAATCAAAGCCTGCAAACTCTCTCCACCATAGCTCCCGAAAGCTGCACCGAGGAAGTG TTTGCGAGGACTCCAAACCTGAAAAAGCTGGGCATCCGTGGGAAAATATCAGTGCTTCTT GATAATAAGTCTGCTGCGTCGTTAAAAAATGTGAAGAGGCTAGAATACCTTGAAAACTTG AAGCTGATAAATGATAGTAGCATTCAAACAAGTAAGTTACGCCTTCCACCTGCATACATA TTTCCAACAAAGTTGAGGAAGCTGACTTTATTAGACACGTGGTTGGAGTGGAAAGATATG TCTATATTGGGTCAGTTGGAACACCTTGAAGTCCTGAAGATGAAAGAAAATGGGTTTTCG GGAGAGTCCTGGGAGTCTACTGGTGGTTTTTGTTCCCTACTGGTGTTGTGGATTGAAAGG ACAAACTTAGTTTCATGGAAAGCATCAGCTGATGATTTTCCAAGACTTAAGCATCTCGTT CTCATCTGCTGTGATAATCTTAAGGAAGTCCCCATCGCCCTAGCTGATATACGCAGTTTC CAAGTCATGATGTTGCAAAATTCCACCAAAACAGCAGCAATATCTGCACGTCAAATACAA GCCAAAAAAGACAATCAAACTCAACAAGGGACTAAAAACATTGCCTTCAAGCTTTCCATA TTCCCTCCTGATCTCTGA

Peptide Sequence

PEP ID	Solyc10g047320.2.1
PEP Infomation	Disease resistance protein (CC-NBS-LRR class) family protein (AHRD V3.3 *** A0A072TW48_MEDTR)
Sequence	MANVAVEFLVENLMQLLRDNVELISGVKEAAESLLQDLNDFNAFLKQAAKCHINENEVLR ELVKKIRTVVNSAEDAIDKFVIEAKLHKDKGVTRVLDLPHYKRVKEVAGEIKAIRNKVRE IRQTDAIGLQALQDDDLSARGSEERKPPVVEEDDVVGFDEEADIVINRLLGESNHLEVVP VVGMPGLGKTTLANKIYKHPKIGYEFFTRIWVYVSQSYRRRELFLNIISKFTRNTKQYHG MCEEDLADEIQEFLGKGGKYLVVLDDVWSDEAWERIKIAFPNNNKPNRVLLTTRDSKVAK QCNPIPHDLKFLTEDESWILLEKKVFHKDKCPPELVLSGKSIAKKCKGLPLAIVVIAGAL IGKGKTPREWKQVDDSVSEHLINRDHPENCNKLVQMSYDRLPYDLKACFLYCSAFPGGFQ IPAWKLIRLWIAEGFIQYKGHLSLECKGEDNLNDLINRNLVMVMERTSDGQIKTCRLHDM LHEFCRQEAMKEENLFQEIKLGSEQYFPGKRELSTYRRLCIHSSVLDFFSTKPSAEHVRS FLSFSSKKIEMPSADIPTIPKGFPLLRVLDVESINFSRFSREFYQLYHLRYVAFSSDSIK ILPKLMGELWNIQTIIINTQQRTLDIQANIWNMERLRHLHTNSSAKLPVPVAPKNSKVTL VNQSLQTLSTIAPESCTEEVFARTPNLKKLGIRGKISVLLDNKSAASLKNVKRLEYLENL KLINDSSIQTSKLRLPPAYIFPTKLRKLTLLDTWLEWKDMSILGQLEHLEVLKMKENGFS GESWESTGGFCSLLVLWIERTNLVSWKASADDFPRLKHLVLICCDNLKEVPIALADIRSF QVMMLQNSTKTAAISARQIQAKKDNQTQQGTKNIAFKLSIFPPDL*

Transcript Sequence

Transcript ID	Solyc10g047320.2.1
Transcript Infomation	Disease resistance protein (CC-NBS-LRR class) family protein (AHRD V3.3 *** A0A072TW48_MEDTR)
Sequence	CTAAATCTAGATCCCGCTCGGCAAGATGTGACTTTTTAATTTTTTATTTAAGGATAAAAG ATTCCGGTCAATACAAACACAAAAAATAAATATTAAAAAGAACACTGCAATTGAGGCAAG AGACCATTCAAAAGGCACTCATAAAGAGGAAGACTTGAGTGGAGTCAACACCCATCACTA TGCATTTCATATTTAGCAATTGAAGTCTGTTGTTTGTTGGAAGAAGAATCAGAAAAAATG GCGAACGTAGCAGTGGAATTTCTGGTTGAGAACTTGATGCAGTTGCTGCGGGACAACGTA GAGCTAATTAGTGGAGTTAAAGAGGCTGCTGAGAGTCTACTTCAAGATCTAAATGATTTC AATGCTTTTCTTAAGCAAGCTGCCAAGTGTCACATCAACGAGAACGAAGTCCTCAGAGAA CTTGTTAAGAAAATAAGAACAGTCGTTAACTCTGCTGAAGATGCTATTGATAAATTTGTT ATTGAAGCTAAGCTACACAAGGATAAGGGTGTCACCAGAGTATTAGATCTTCCCCATTAT AAAAGAGTCAAAGAGGTAGCTGGTGAGATCAAAGCTATACGAAACAAAGTCAGAGAGATC CGACAGACTGATGCCATTGGACTTCAGGCCCTTCAAGATGATGATTTATCTGCTAGAGGT TCCGAAGAAAGAAAGCCTCCAGTGGTAGAGGAAGATGACGTGGTTGGATTTGACGAAGAA GCAGATATTGTAATCAACCGCCTTCTTGGAGAATCGAATCATCTAGAAGTTGTTCCAGTT GTTGGTATGCCTGGTCTCGGCAAAACGACCCTAGCAAATAAGATTTACAAGCATCCTAAA ATCGGGTATGAGTTTTTTACTCGTATTTGGGTTTATGTGTCTCAATCATACAGGAGAAGA GAATTATTTCTCAACATCATCAGCAAATTCACTCGAAATACAAAACAATATCATGGGATG TGTGAGGAGGATTTGGCTGATGAAATACAAGAATTCTTGGGAAAGGGAGGAAAATACTTG GTTGTGTTGGATGACGTATGGTCGGATGAAGCTTGGGAACGTATCAAGATAGCATTCCCA AATAACAACAAACCGAATCGAGTATTGTTGACCACTCGAGATTCCAAAGTGGCTAAACAA TGCAATCCCATACCTCATGATCTAAAATTTCTGACTGAAGATGAAAGTTGGATATTACTG GAGAAGAAGGTTTTTCACAAGGACAAATGTCCTCCTGAATTGGTACTATCTGGAAAGAGC ATAGCAAAAAAATGCAAGGGACTACCACTTGCGATTGTTGTTATTGCAGGAGCACTAATA GGGAAAGGCAAGACACCAAGAGAGTGGAAACAAGTGGATGATAGTGTTAGTGAACACCTC ATAAATAGAGACCACCCTGAGAATTGTAACAAACTGGTGCAAATGAGTTATGATCGTTTA CCTTACGACTTGAAAGCATGCTTTTTATATTGTAGTGCATTTCCTGGAGGCTTTCAAATC CCTGCTTGGAAGTTAATCCGTTTGTGGATTGCGGAAGGATTCATACAGTATAAAGGCCAT TTATCTCTTGAGTGTAAAGGAGAGGACAACTTGAATGATCTCATCAATAGGAATCTAGTG ATGGTAATGGAAAGAACTTCTGATGGTCAAATCAAAACATGTCGTCTTCATGACATGTTG CACGAGTTTTGCAGGCAAGAAGCTATGAAGGAAGAAAATCTTTTCCAAGAAATAAAGTTA GGATCTGAGCAATATTTTCCTGGAAAACGAGAACTATCCACCTACCGTCGCTTATGCATC CATTCCTCAGTTTTGGATTTTTTCTCTACGAAACCTTCAGCTGAACATGTCAGGTCATTC TTATCTTTTTCTTCGAAAAAGATTGAGATGCCATCTGCTGACATCCCAACCATACCCAAA GGCTTTCCGTTGCTAAGGGTTTTGGATGTAGAATCAATCAACTTCAGTCGCTTTTCCAGG GAGTTTTACCAGTTATATCATTTGAGGTATGTTGCTTTTTCATCTGACTCAATCAAGATT CTTCCTAAACTCATGGGAGAACTTTGGAACATCCAAACCATCATAATTAACACGCAACAA CGCACTCTTGATATTCAAGCAAACATATGGAATATGGAACGACTAAGGCATCTGCACACT AACTCTTCCGCTAAGTTGCCTGTCCCTGTTGCTCCAAAAAATAGTAAGGTTACATTGGTA AATCAAAGCCTGCAAACTCTCTCCACCATAGCTCCCGAAAGCTGCACCGAGGAAGTGTTT GCGAGGACTCCAAACCTGAAAAAGCTGGGCATCCGTGGGAAAATATCAGTGCTTCTTGAT AATAAGTCTGCTGCGTCGTTAAAAAATGTGAAGAGGCTAGAATACCTTGAAAACTTGAAG CTGATAAATGATAGTAGCATTCAAACAAGTAAGTTACGCCTTCCACCTGCATACATATTT CCAACAAAGTTGAGGAAGCTGACTTTATTAGACACGTGGTTGGAGTGGAAAGATATGTCT ATATTGGGTCAGTTGGAACACCTTGAAGTCCTGAAGATGAAAGAAAATGGGTTTTCGGGA GAGTCCTGGGAGTCTACTGGTGGTTTTTGTTCCCTACTGGTGTTGTGGATTGAAAGGACA AACTTAGTTTCATGGAAAGCATCAGCTGATGATTTTCCAAGACTTAAGCATCTCGTTCTC ATCTGCTGTGATAATCTTAAGGAAGTCCCCATCGCCCTAGCTGATATACGCAGTTTCCAA GTCATGATGTTGCAAAATTCCACCAAAACAGCAGCAATATCTGCACGTCAAATACAAGCC AAAAAAGACAATCAAACTCAACAAGGGACTAAAAACATTGCCTTCAAGCTTTCCATATTC CCTCCTGATCTCTGATTGTGTGCACTTCTCCTTCACAGGTCCTCAATGAATCACATTGCA TGAGGGCTGGTACCCTAGCTTGGATAAAGAAACAGCCTATATCTATCTAGTGTTTCATAA TTCTTGAGTCAATGTCAGTTTTTCATGGTTGTTGTCTTCTTGATTGTGGCCATAGCCTGT ATGTTCTTGATTTTGTGGTATGTTAATCTGTATGAACAATGTATTTTGTACTTACAATAA GAGTTGATCTATTGTGTAGTCTTTGGCTTCAGAGCTGTCACTTGTGTAATATTGTAAAAA ATTATATCCATGGAGTAACTAGGCTTGGATATTGTTTCGTTTGGAAGTTTGGAGGTAGTA TTATGAAAATACTTTCTCCTATACCTTCACCCGGTCAAATTGGACGGTACTCTTAACTCT AAGCAGAGGTGGATCCAAGATTACGCTTGTGCGTTCTTATTGAGGTGTTTATCGGGCTAT TGGTAAAATATTTGTGCTAAAAAATTCAGCTTATTCATTTTTAACTATACTAAACCGCGA ACCGA