Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g047300.2.1
CDS Infomation

Translocon at the outer membrane of chloroplasts 64-V isoform 1 (AHRD V3.3 *** A0A061E2D6_THECC)
Sequence

ATGACAAAACTCAATGTATCGAACCCCAAAGTCTGGGTTGTGATCGGCGTCGGATTCGCC
GGAATATTGATCATGGCTGAGGTCAATCGGCGACGATTGAAAGCTAGAAACTCAATCAAA
CAAGACTTTGGCGCTTTTATTGAACGAATCGAGTTGCTTCCGTTTCCTCAACCACCTCCT
CCAGCTGCTCGACTTTCCCTTTCTGGCCTCTCATTTGCCATCAAAGACAACATTGATGTG
AAGGAATATGTGACGGGTTTTGGTAGTCCAGCCTGGAAACAGACGCATGAGGCGGCTACA
AAGACAGCCATTGTTGTAACTGCTCTTCTGAAGAATGGTTCTACTTGTGTTGGGAAGACT
ATCATGGACGAATTTGGACTTGGGATTACTGGAGAGAATGTGCACTACGGTACTCCAACT
AATCCAAAATTGCCATCTCATATTCCAGGTGGTTCATCCAGTGGTTCAGCTGTTGCTGTT
GCGGCTGAACTTGTTGATTTTGCTTTAGGTACCGATATGACTGGGTGCATCAGAGTCCCA
GCAGCATTTTGTGGTGTCTTTGGGTTTAGGCCGTCACATAGGGCCATATCGACTGTTGGT
GTTCTGCCTGTATCACAAAGTTTGGACAGTATTGGATGGTTAGCTCGTGATCCATCTGTG
CTGCATCGAGTTGGACATGTGTTGCTTCAGATACCATCAATTGAACCTAAGAGGACAAGA
TGCTTTGTTATAGCTGATGATCTTTTTCAGCTCTGTAATGTACCAAAACAGAAGACAGTG
TATGTTGTCACCAAAGTAATAGAAAAATTATCTGGATACCAGGCACCCAAACATCTGAAC
CTTGGGCAGTATATTGCATCAAACGTACCCAGCTTAAAAGGTTTCATTGAACAATCAACC
ATCCAGCAGAATGGGATGTCTACTCTACGAGCTCTCTCTTCTGTGATGTTTCTTCTTCAA
AGATATGAGTTTAACACAAATTATGAAGAATGGATGAAGGCTGTGAAACCGAGGTTGGGT
TCTCAAGTTACCAATCACATTGCTGCAGCAGATACCTTGGCTCCTGAGAACATCAAAGTT
CTTTACAAAGTTAGGACCGAGATGCGAGTTGCTATGCAGAATCTTTTGAAGAACGATGGC
ATATTGGTTCTTCCGACGGTTGCAGATCCTCCTTTAAAATTAAAGTCAAGGAAAGGTCTA
TATGCTGAAGTTCATGATAGAGCATTTGCTTTATTGGGCATTGCCAGCATGTCAGGATGT
TGTCAGGCTGCCATTCCTTTTGGAGAACATGAGAACTATCCTATCTCCCTGTCATTTATT
GCATCTCACGGGACTGATAAGTTTCTACTTGACACTGTCTTGGATATGTACTCATCTATC
CAAAATGAAGTAAGCATACAATCCAGTGCATCTCCATTACCAGATACCAATGGTAGCATT
GATGCATCTGAGCTTTTGAAAGAAAAGGGAAATGCTGCATATAAGGGCAAGCAGTGGAAC
AAAGCTGTAAGCTACTATACAGAAGCAATAAAATTGAATGACAACGCTACATATTATTCC
AACCGGGCAGCTGCTTACTTAGAATTGGGATGCTTCCACCAAGCTGAAGAGGACTGTACT
AAAGCAATTTCACTTGATAAAAAGAATGTAAAGGCTTATATGAGAAGGGGAACTGCCAGA
GAGTCCCTTCTCTTCTATAAAGAGGCTCTTCAAGATATTAGACATGCACTCGTTCTGGAA
CCACAGAATAAGTATGCAAGTGTGTCCGAAAAGAGACTCAGAAAGCTAATTAGTTGA

Peptide Sequence

PEP ID

Solyc10g047300.2.1
PEP Infomation

Translocon at the outer membrane of chloroplasts 64-V isoform 1 (AHRD V3.3 *** A0A061E2D6_THECC)
Sequence

MTKLNVSNPKVWVVIGVGFAGILIMAEVNRRRLKARNSIKQDFGAFIERIELLPFPQPPP
PAARLSLSGLSFAIKDNIDVKEYVTGFGSPAWKQTHEAATKTAIVVTALLKNGSTCVGKT
IMDEFGLGITGENVHYGTPTNPKLPSHIPGGSSSGSAVAVAAELVDFALGTDMTGCIRVP
AAFCGVFGFRPSHRAISTVGVLPVSQSLDSIGWLARDPSVLHRVGHVLLQIPSIEPKRTR
CFVIADDLFQLCNVPKQKTVYVVTKVIEKLSGYQAPKHLNLGQYIASNVPSLKGFIEQST
IQQNGMSTLRALSSVMFLLQRYEFNTNYEEWMKAVKPRLGSQVTNHIAAADTLAPENIKV
LYKVRTEMRVAMQNLLKNDGILVLPTVADPPLKLKSRKGLYAEVHDRAFALLGIASMSGC
CQAAIPFGEHENYPISLSFIASHGTDKFLLDTVLDMYSSIQNEVSIQSSASPLPDTNGSI
DASELLKEKGNAAYKGKQWNKAVSYYTEAIKLNDNATYYSNRAAAYLELGCFHQAEEDCT
KAISLDKKNVKAYMRRGTARESLLFYKEALQDIRHALVLEPQNKYASVSEKRLRKLIS*

Transcript Sequence

Transcript ID

Solyc10g047300.2.1
Transcript Infomation

Translocon at the outer membrane of chloroplasts 64-V isoform 1 (AHRD V3.3 *** A0A061E2D6_THECC)
Sequence

AAAATATTTTTGCATTTTTCTCTTAAAAGAAAATTCTGAAGGACATTTTTACTTGTGGGA
AAAGGAAGATTCGGCGCGTGATGGAAACGTGCACAGGCACGTGGAAAGTTCTTTGGAGAA
GACTCTTAAACCCCATTTCTGTGAAACCCAAAAATCAATACTAGCATAGCATTTCCCTTA
AACCCTTTCAAAACCTTCAAATTTTGCTGCCGAGCTGCCGGTGATGACAAAACTCAATGT
ATCGAACCCCAAAGTCTGGGTTGTGATCGGCGTCGGATTCGCCGGAATATTGATCATGGC
TGAGGTCAATCGGCGACGATTGAAAGCTAGAAACTCAATCAAACAAGACTTTGGCGCTTT
TATTGAACGAATCGAGTTGCTTCCGTTTCCTCAACCACCTCCTCCAGCTGCTCGACTTTC
CCTTTCTGGCCTCTCATTTGCCATCAAAGACAACATTGATGTGAAGGAATATGTGACGGG
TTTTGGTAGTCCAGCCTGGAAACAGACGCATGAGGCGGCTACAAAGACAGCCATTGTTGT
AACTGCTCTTCTGAAGAATGGTTCTACTTGTGTTGGGAAGACTATCATGGACGAATTTGG
ACTTGGGATTACTGGAGAGAATGTGCACTACGGTACTCCAACTAATCCAAAATTGCCATC
TCATATTCCAGGTGGTTCATCCAGTGGTTCAGCTGTTGCTGTTGCGGCTGAACTTGTTGA
TTTTGCTTTAGGTACCGATATGACTGGGTGCATCAGAGTCCCAGCAGCATTTTGTGGTGT
CTTTGGGTTTAGGCCGTCACATAGGGCCATATCGACTGTTGGTGTTCTGCCTGTATCACA
AAGTTTGGACAGTATTGGATGGTTAGCTCGTGATCCATCTGTGCTGCATCGAGTTGGACA
TGTGTTGCTTCAGATACCATCAATTGAACCTAAGAGGACAAGATGCTTTGTTATAGCTGA
TGATCTTTTTCAGCTCTGTAATGTACCAAAACAGAAGACAGTGTATGTTGTCACCAAAGT
AATAGAAAAATTATCTGGATACCAGGCACCCAAACATCTGAACCTTGGGCAGTATATTGC
ATCAAACGTACCCAGCTTAAAAGGTTTCATTGAACAATCAACCATCCAGCAGAATGGGAT
GTCTACTCTACGAGCTCTCTCTTCTGTGATGTTTCTTCTTCAAAGATATGAGTTTAACAC
AAATTATGAAGAATGGATGAAGGCTGTGAAACCGAGGTTGGGTTCTCAAGTTACCAATCA
CATTGCTGCAGCAGATACCTTGGCTCCTGAGAACATCAAAGTTCTTTACAAAGTTAGGAC
CGAGATGCGAGTTGCTATGCAGAATCTTTTGAAGAACGATGGCATATTGGTTCTTCCGAC
GGTTGCAGATCCTCCTTTAAAATTAAAGTCAAGGAAAGGTCTATATGCTGAAGTTCATGA
TAGAGCATTTGCTTTATTGGGCATTGCCAGCATGTCAGGATGTTGTCAGGCTGCCATTCC
TTTTGGAGAACATGAGAACTATCCTATCTCCCTGTCATTTATTGCATCTCACGGGACTGA
TAAGTTTCTACTTGACACTGTCTTGGATATGTACTCATCTATCCAAAATGAAGTAAGCAT
ACAATCCAGTGCATCTCCATTACCAGATACCAATGGTAGCATTGATGCATCTGAGCTTTT
GAAAGAAAAGGGAAATGCTGCATATAAGGGCAAGCAGTGGAACAAAGCTGTAAGCTACTA
TACAGAAGCAATAAAATTGAATGACAACGCTACATATTATTCCAACCGGGCAGCTGCTTA
CTTAGAATTGGGATGCTTCCACCAAGCTGAAGAGGACTGTACTAAAGCAATTTCACTTGA
TAAAAAGAATGTAAAGGCTTATATGAGAAGGGGAACTGCCAGAGAGTCCCTTCTCTTCTA
TAAAGAGGCTCTTCAAGATATTAGACATGCACTCGTTCTGGAACCACAGAATAAGTATGC
AAGTGTGTCCGAAAAGAGACTCAGAAAGCTAATTAGTTGATCACTTACTGCTAAGACTAA
TGATAATAAAAACCCAGAGGAAAATCAGCGGGGTAATGTATAGGTCAAAAAGGCAGAGGA
CTTTTTAAAAAGAGATACAGATGAACCTTGCTGAGTTACTGGAAGCTAACTATAAGTGTA
TGATTCCTTGTATTTGCTCATGGATATCTGTTCTTTTTCTTCTTTCTGGTCTAAGTCTCC
ACATGTAATGAATTCATCCATTGGAGAAAAATAATCTGTTTACGTTCCCATTTGTTATCG
AGACACCTTTAAGTCTTAATTGGAGGATGCTATATGTTGTCAACTTTTGTATGTAGCCAA
CACAAAGTAGTTAATTTTGTTCACCATCACCATCCTGATGAGTGATAAACTACTTTAAGT
TTCTGGACTTTCTGCAATGAGCCTTGTGAATTGTGTTTAAA