Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g047220.2.1
CDS Infomation

Plant/MHJ24-14 protein (AHRD V3.3 *** I3SQK3_MEDTR)
Sequence

ATGAGTTTGTCACTCATACAAAGTTACTCCTCATCGGAGGAAGAAGAAGAACAAGAAGAA
GAACTTCACTACGACAACTCCGACGACGACCAAAAAGATGACGTTCCACAGAATCGTTAC
AAACCTTTTTTTAACCCTAATCCTTCTTCATCTTCATTGCTCCCTTCCGCTCTTGATGCC
TTCTCCGAAATTTCAGGGCCGCCGGAGTTTTTGAACAACAGTGTTGAAGAAGCGGGAAAG
GACGTTAATGAACAGAGACACGGTCGCCGTAAGTACAGCAGAAACAAGAATGATTTACCA
GCTGGTGCTGTAGTGGAGTCAAAGGCTCAATTAGTAGGACTTCATGAGAGGGTGAGAAGC
GATGTCGGTGGGGGCATCCCAAAAGCAGCCACTGGTCAAGGAAATGCTTTTGTTGGCACT
GTACAAGGAGGCAAATCTGTGGCAACTGCGAGCTATCCTGGTGCAGAAGATGCAGCAGAG
CTTCTGAGGATGTGCTTGAGATGTGGAATTCCCAAAACATACACACACACAAAAGGGATG
GTGTGCCCAGCGTGCAGTGATCACCCTGTAAACTCTGACGAAGAGCCAGTCAAGAAAAAG
GGGTCTACCGTCAAAGACAAGGAGAAGAATAAGAGGATGAAGGGGCAGTCATCCCATGCA
ACATGGAAAAGTGAGACGGAAATGCATCTCCGCCAACAATTTGATTAG

Peptide Sequence

PEP ID

Solyc10g047220.2.1
PEP Infomation

Plant/MHJ24-14 protein (AHRD V3.3 *** I3SQK3_MEDTR)
Sequence

MSLSLIQSYSSSEEEEEQEEELHYDNSDDDQKDDVPQNRYKPFFNPNPSSSSLLPSALDA
FSEISGPPEFLNNSVEEAGKDVNEQRHGRRKYSRNKNDLPAGAVVESKAQLVGLHERVRS
DVGGGIPKAATGQGNAFVGTVQGGKSVATASYPGAEDAAELLRMCLRCGIPKTYTHTKGM
VCPACSDHPVNSDEEPVKKKGSTVKDKEKNKRMKGQSSHATWKSETEMHLRQQFD*

Transcript Sequence

Transcript ID

Solyc10g047220.2.1
Transcript Infomation

Plant/MHJ24-14 protein (AHRD V3.3 *** I3SQK3_MEDTR)
Sequence

ATCGAAAAATTGAATATAGGTAAGCAAACGTTGCAACTATGCAATTTTAAGTACGACTTG
CTGCGGGACTATAAACTCGAAGTTCTTTTTCGAATCGTGCCCGCCGGTGACGATGAGTTT
GTCACTCATACAAAGTTACTCCTCATCGGAGGAAGAAGAAGAACAAGAAGAAGAACTTCA
CTACGACAACTCCGACGACGACCAAAAAGATGACGTTCCACAGAATCGTTACAAACCTTT
TTTTAACCCTAATCCTTCTTCATCTTCATTGCTCCCTTCCGCTCTTGATGCCTTCTCCGA
AATTTCAGGGCCGCCGGAGTTTTTGAACAACAGTGTTGAAGAAGCGGGAAAGGACGTTAA
TGAACAGAGACACGGTCGCCGTAAGTACAGCAGAAACAAGAATGATTTACCAGCTGGTGC
TGTAGTGGAGTCAAAGGCTCAATTAGTAGGACTTCATGAGAGGGTGAGAAGCGATGTCGG
TGGGGGCATCCCAAAAGCAGCCACTGGTCAAGGAAATGCTTTTGTTGGCACTGTACAAGG
AGGCAAATCTGTGGCAACTGCGAGCTATCCTGGTGCAGAAGATGCAGCAGAGCTTCTGAG
GATGTGCTTGAGATGTGGAATTCCCAAAACATACACACACACAAAAGGGATGGTGTGCCC
AGCGTGCAGTGATCACCCTGTAAACTCTGACGAAGAGCCAGTCAAGAAAAAGGGGTCTAC
CGTCAAAGACAAGGAGAAGAATAAGAGGATGAAGGGGCAGTCATCCCATGCAACATGGAA
AAGTGAGACGGAAATGCATCTCCGCCAACAATTTGATTAGTCAAGTCTAAAACAAGTTGG
TCCAAAATATAGTTAGGTCCTCCAGTAACATAATCGATCAACTATGTACTTATAGCAGCT
CTACTCAGCTGAAGTGATACTCGGAATTATGAGGTAATCTTGCAGCTATCTGTTTAAAGT
GCATAACCTGTGTGATGTAGATTCTGGTCTGGCTTTAAAGCTAAGGTGCCACCACTTTGT
TTGTTTTTCTCAAGTTGTTGCAGCATAAATTTAGTTTTTGATACTTCTTGTTTGGAAGAA
GCCGTGTAGTAAACATGTATCATGCTCTTTCATCATTGTCAACTTGGGACTTGATTATAC
ATTATGTAGGGATAAATTTCTTCACTTGATGAATTTGTTTCATAAATTACACGTTTT