Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g045620.2.1
CDS Infomation	plant/protein%2C putative (DUF3411) (AHRD V3.3 *** AT5G24690.1)
Sequence	ATGTTAGAGGGGATAACAAGATGGGAATCGAATCCTCACCAACAAAGTGAAAGTTCAGGT GGCCAACCAATGGAGCTACTAAAATTTCCCATGCAGAAACTAAGCTCGCAAAAGATCTCA GGAAAAAATAATTGCTTGAGACAAGCTTTAGCTTTATATGGGAAGATGATTGCAGATCCG GTATTTTTATACAAACTGCTTCTAGAGCAAGCCAGTACAATTGGTTGCTCAGTTTGGTGG GAGATCAAAAACCGTAAGGAGAGGATAAAGCAGGAGTGGGATCTTGCCCTTCTTAATGTG CTTACTGTAACGGCTTGCAATGCTATTGTTGTTTGGTCGCTTGCTCCTTGTCGTTCATAT GGGAACACATTCCAGTTTGATTTGCAAAACACATTACAGAAGCTTCCAAACAATGTCTTT GAAAAGAGTTATCCACTAAGAGAATTCGACTTGCAAAAGAGAATTCAGTCCTTTTTCTAT AAGGCTGCAGAGCTCTGTTTGGTTGGTCTCACTACAGGGGCTTTCCAAGGGGCTGTATCG AATCTTGTTGTCACTAGAAAGAAGGGAAGGTTGTCGGTGACAGTACCATCTGTGAGCAGT AATGCCCTTGGTTATGGTGCCTTCCTTGGTCTTTATGCAAACCTGCGTTATCAGCTATTG TGTGGATTTGACAGAGCTGTAGTTAACCACTTTGATGTTATTGGAGTGGCTCTCTTCTTC AGCACTGCCCTGAGGGTCTTGAATGTTCGAGTAGGAGAGGCATCAAGACTAGCGTGGCTC GGTGTGGAGGTGGATCCACTGGCCCATTCAGATGATGTCTTGAAGGCTTATAGTAGACCC ACTGAGGGTCTTGATCAGCCTTCTTCAAAATGGTTCTTGTCCAAGAATGCCATAGTTTCA GGGCTTGGGCTTCTTGGGATCAAACAGGGTCAGACTGGCATAGCTTCTGAAGGGGAAACA CCAGTGCCTAAGGCTCGGAGAAAAAGAATAGTCAGGAAAAAAGTAACAAGTCAAGCCTAG

Peptide Sequence

PEP ID	Solyc10g045620.2.1
PEP Infomation	plant/protein%2C putative (DUF3411) (AHRD V3.3 *** AT5G24690.1)
Sequence	MLEGITRWESNPHQQSESSGGQPMELLKFPMQKLSSQKISGKNNCLRQALALYGKMIADP VFLYKLLLEQASTIGCSVWWEIKNRKERIKQEWDLALLNVLTVTACNAIVVWSLAPCRSY GNTFQFDLQNTLQKLPNNVFEKSYPLREFDLQKRIQSFFYKAAELCLVGLTTGAFQGAVS NLVVTRKKGRLSVTVPSVSSNALGYGAFLGLYANLRYQLLCGFDRAVVNHFDVIGVALFF STALRVLNVRVGEASRLAWLGVEVDPLAHSDDVLKAYSRPTEGLDQPSSKWFLSKNAIVS GLGLLGIKQGQTGIASEGETPVPKARRKRIVRKKVTSQA*

Transcript Sequence

Transcript ID	Solyc10g045620.2.1
Transcript Infomation	plant/protein%2C putative (DUF3411) (AHRD V3.3 *** AT5G24690.1)
Sequence	ATGTTAGAGGGGATAACAAGATGGGAATCGAATCCTCACCAACAAAGTGAAAGTTCAGGT GGCCAACCAATGGAGCTACTAAAATTTCCCATGCAGAAACTAAGCTCGCAAAAGATCTCA GGAAAAAATAATTGCTTGAGACAAGCTTTAGCTTTATATGGGAAGATGATTGCAGATCCG GTATTTTTATACAAACTGCTTCTAGAGCAAGCCAGTACAATTGGTTGCTCAGTTTGGTGG GAGATCAAAAACCGTAAGGAGAGGATAAAGCAGGAGTGGGATCTTGCCCTTCTTAATGTG CTTACTGTAACGGCTTGCAATGCTATTGTTGTTTGGTCGCTTGCTCCTTGTCGTTCATAT GGGAACACATTCCAGTTTGATTTGCAAAACACATTACAGAAGCTTCCAAACAATGTCTTT GAAAAGAGTTATCCACTAAGAGAATTCGACTTGCAAAAGAGAATTCAGTCCTTTTTCTAT AAGGCTGCAGAGCTCTGTTTGGTTGGTCTCACTACAGGGGCTTTCCAAGGGGCTGTATCG AATCTTGTTGTCACTAGAAAGAAGGGAAGGTTGTCGGTGACAGTACCATCTGTGAGCAGT AATGCCCTTGGTTATGGTGCCTTCCTTGGTCTTTATGCAAACCTGCGTTATCAGCTATTG TGTGGATTTGACAGAGCTGTAGTTAACCACTTTGATGTTATTGGAGTGGCTCTCTTCTTC AGCACTGCCCTGAGGGTCTTGAATGTTCGAGTAGGAGAGGCATCAAGACTAGCGTGGCTC GGTGTGGAGGTGGATCCACTGGCCCATTCAGATGATGTCTTGAAGGCTTATAGTAGACCC ACTGAGGGTCTTGATCAGCCTTCTTCAAAATGGTTCTTGTCCAAGAATGCCATAGTTTCA GGGCTTGGGCTTCTTGGGATCAAACAGGGTCAGACTGGCATAGCTTCTGAAGGGGAAACA CCAGTGCCTAAGGCTCGGAGAAAAAGAATAGTCAGGAAAAAAGTAACAAGTCAAGCCTAG GTGGTTGACGACGTAAGTCATCAATTCAATTTTGCAGCCTGAGAATTTAATAAGCATTTA GTGTTTGATTGAAGCCCAAAATGAAGACGGCTTAAATGCAAGTCTGATCATGAGCATAGC CATGTCCACTACAAAGGAAGGCGTTTAACTGTTATAGGATGATGCGGAAGCTCTCTCTTC TCAAATTCTTGCCTTCGTTTCCAAATCTTCATGAATCACTGATTTACGTGAGATTACTTT GGCTATCAGGAAAATTTTCGAGGCTGAACTTTTAAAATGAATTCCATAGTTAGGACTACT TATATTGCTGCAGTCCTCTTACAGTCATGCTTTTAGTATATCTTTTTCTTTTCCCTGTTG CCTCTTTTGATGTTCTTGGCTGAGATGCTCAAGCTTAAACCACTGCTCAATTGAAGCTTG TTCCACATCTTTCTCTTCAATGTCTTATAAACCCCATCTTGATAAATCAATCAAGAACTT GTGTTAAGAGGGAATACCATACTATTATCTGAAAATTACATAAGACGTATTATGAATCAC AATAAGTAACTATTTAAAAGGCATCTAAACAATAAGAT