Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g045380.2.1
CDS Infomation

Vacuolar protein sorting-associated protein 62 (AHRD V3.3 *** A0A103Y146_CYNCS)
Sequence

ATGTGTTCCACTCTTCTTGTGTTGTGTGGCAGATCTCCGGTGGCCATGGCATACCTTTTT
TTTTTCAAGGATATGGTTATGTCTTGTACTATTTTAGTGTTAGCACTTGCTTTAAGAATC
AGTTGTTCAAATTCAACCATGGGAGTAGACAACTTAAACGCAACATTTTTGGTTGATAAT
GCTTCAACACAGAACATCATCGATAATGCCTTTCGTTTTCCTTCTCCATTGCCCACTTGG
CCTTCAGGTGGATGCTTTGCAAGTGGATTCATTGATCTTGGAGGATTACAGGTGTCTCAA
ATATCATCCTTAACTAAAGTTTGGTCGACACATGAAGGTGGACCAGATAATCTTGGAGCT
ACATTCTTTGAACCATCAAATATACCAAATGGATTCTTTATGTTTGGTTCGTACACCCAA
CCTAATAATATTCCCCTTTTCGGATGGACTCTTGCTGGGAGAGACACATCACAAGGTACG
CTCAAGATGCCAACTGACTACACCCTTGTATGGAGTAGTCACAACTTGAACATCAAGCAG
GATGGTGTCGGCTATATCTGGTTGCCAATACCTCCTCAGGGTTATAAAGCCATAAGCCAT
GTTGTCACCGCCTCACCTCAGAAGCCTTCGCTGGATAAAGTTCGTTGTGTTCGTGATGAT
CTCACTGATGCATGTGAAATTCATGATTGGATATGGGGCACCAATGGCTTCAATGTGTAC
TCATTGAGACCTAGAGACAGAGGAGTGCGAGCCTTAGGAGTGCCAACAGGTGCTTTTATG
GTACAGAACAGTGGAGCTGCAGAGTCACTAGCTTGTTTAAAGAATGTTAAATCTGATATA
TCTGCAATGCCAAATTTGAACCAAGTTAAGACATTGGTTCAAGCATACTCTCCGGTGATT
TACTTTCATCCTGATGAAGAATACTATCCGTCATCAGTGACTTGGTTTTTTCAGAATGGA
GCATTATTATATACCAAAGGACAGGAATCTTCACCTGTAGGTATTCATCCCACAGGTTCA
AATCTTCCTCAAGATGGTTCAAACGATGGTGCTTACTGGCTGGACCTCCCGACTGATGAT
GCTGCGAAAACTAATGTCAAGAAAGGAGATTTACAGGGTGCCACAGCCTACTTACACGTT
AAACCAATGTTTGGTGCAACACATACTGATATTGCTGTGTGGCTATTTTATCCCTTCAAT
GGACCTGCAAAGGCTAAACTCGAATTCATGACCATTTCCTTGGGGAAAATTGGAGAGCAC
GTTGGTGATTGGGAACATGTTACATTGAGGATTAGCAACTTCAACGGGGAGTTACAAAGC
ATATACTTTTCACAACACAGTGGAGGGATTTGGGTACCTGCCTCTCAGCTAGAATTTCAA
AACGGTAACAAACCCGTGGTGTACTCATCGCTGCATGGACACGCTGCTTATCCAGGACCA
GGAAAGAATTTGCAAGGGAGAGGAGATGTAGGAATCAGAAATGATACAGGGAAGGGGAAG
TTGATGGACATAGGAACAAACTTTTTAGTAGCAGCAGCAGAATACTTGGGATCAACAATA
GTGGAGCCAGTATGGCTTAATTATGGAAGGGAATGGGGTCCAAAAATTAGCTATGATATA
TCAAAAGAGCTGAGGAAAGTAGAAAGATTTATGATTGGCAAACTGAAGAAAGCTATTGAG
AAAATAGTGAGAGATCTACCAAATGAGGTTTTGGGCGAGGAAGGACCAATAGGCCCAAAG
TTTAAGGACATGTGGAGTGGTGATGAAAGGGGTTGA

Peptide Sequence

PEP ID

Solyc10g045380.2.1
PEP Infomation

Vacuolar protein sorting-associated protein 62 (AHRD V3.3 *** A0A103Y146_CYNCS)
Sequence

MCSTLLVLCGRSPVAMAYLFFFKDMVMSCTILVLALALRISCSNSTMGVDNLNATFLVDN
ASTQNIIDNAFRFPSPLPTWPSGGCFASGFIDLGGLQVSQISSLTKVWSTHEGGPDNLGA
TFFEPSNIPNGFFMFGSYTQPNNIPLFGWTLAGRDTSQGTLKMPTDYTLVWSSHNLNIKQ
DGVGYIWLPIPPQGYKAISHVVTASPQKPSLDKVRCVRDDLTDACEIHDWIWGTNGFNVY
SLRPRDRGVRALGVPTGAFMVQNSGAAESLACLKNVKSDISAMPNLNQVKTLVQAYSPVI
YFHPDEEYYPSSVTWFFQNGALLYTKGQESSPVGIHPTGSNLPQDGSNDGAYWLDLPTDD
AAKTNVKKGDLQGATAYLHVKPMFGATHTDIAVWLFYPFNGPAKAKLEFMTISLGKIGEH
VGDWEHVTLRISNFNGELQSIYFSQHSGGIWVPASQLEFQNGNKPVVYSSLHGHAAYPGP
GKNLQGRGDVGIRNDTGKGKLMDIGTNFLVAAAEYLGSTIVEPVWLNYGREWGPKISYDI
SKELRKVERFMIGKLKKAIEKIVRDLPNEVLGEEGPIGPKFKDMWSGDERG*

Transcript Sequence

Transcript ID

Solyc10g045380.2.1
Transcript Infomation

Vacuolar protein sorting-associated protein 62 (AHRD V3.3 *** A0A103Y146_CYNCS)
Sequence

TAAAAGGCACTAGCCGTATAGATTATAATAATAATAAGAGGAGACGAAATAAGATGTTTT
TTGAATAATAGAAATGGAAAGCTGAAAATGACAAGTAACAAAACCTTCACCCAAAAAGAT
ACCCTTCTTTTTTCCTTAACTTCACCTGCAAATGTGTTCCACTCTTCTTGTGTTGTGTGG
CAGATCTCCGGTGGCCATGGCATACCTTTTTTTTTTCAAGGATATGGTTATGTCTTGTAC
TATTTTAGTGTTAGCACTTGCTTTAAGAATCAGTTGTTCAAATTCAACCATGGGAGTAGA
CAACTTAAACGCAACATTTTTGGTTGATAATGCTTCAACACAGAACATCATCGATAATGC
CTTTCGTTTTCCTTCTCCATTGCCCACTTGGCCTTCAGGTGGATGCTTTGCAAGTGGATT
CATTGATCTTGGAGGATTACAGGTGTCTCAAATATCATCCTTAACTAAAGTTTGGTCGAC
ACATGAAGGTGGACCAGATAATCTTGGAGCTACATTCTTTGAACCATCAAATATACCAAA
TGGATTCTTTATGTTTGGTTCGTACACCCAACCTAATAATATTCCCCTTTTCGGATGGAC
TCTTGCTGGGAGAGACACATCACAAGGTACGCTCAAGATGCCAACTGACTACACCCTTGT
ATGGAGTAGTCACAACTTGAACATCAAGCAGGATGGTGTCGGCTATATCTGGTTGCCAAT
ACCTCCTCAGGGTTATAAAGCCATAAGCCATGTTGTCACCGCCTCACCTCAGAAGCCTTC
GCTGGATAAAGTTCGTTGTGTTCGTGATGATCTCACTGATGCATGTGAAATTCATGATTG
GATATGGGGCACCAATGGCTTCAATGTGTACTCATTGAGACCTAGAGACAGAGGAGTGCG
AGCCTTAGGAGTGCCAACAGGTGCTTTTATGGTACAGAACAGTGGAGCTGCAGAGTCACT
AGCTTGTTTAAAGAATGTTAAATCTGATATATCTGCAATGCCAAATTTGAACCAAGTTAA
GACATTGGTTCAAGCATACTCTCCGGTGATTTACTTTCATCCTGATGAAGAATACTATCC
GTCATCAGTGACTTGGTTTTTTCAGAATGGAGCATTATTATATACCAAAGGACAGGAATC
TTCACCTGTAGGTATTCATCCCACAGGTTCAAATCTTCCTCAAGATGGTTCAAACGATGG
TGCTTACTGGCTGGACCTCCCGACTGATGATGCTGCGAAAACTAATGTCAAGAAAGGAGA
TTTACAGGGTGCCACAGCCTACTTACACGTTAAACCAATGTTTGGTGCAACACATACTGA
TATTGCTGTGTGGCTATTTTATCCCTTCAATGGACCTGCAAAGGCTAAACTCGAATTCAT
GACCATTTCCTTGGGGAAAATTGGAGAGCACGTTGGTGATTGGGAACATGTTACATTGAG
GATTAGCAACTTCAACGGGGAGTTACAAAGCATATACTTTTCACAACACAGTGGAGGGAT
TTGGGTACCTGCCTCTCAGCTAGAATTTCAAAACGGTAACAAACCCGTGGTGTACTCATC
GCTGCATGGACACGCTGCTTATCCAGGACCAGGAAAGAATTTGCAAGGGAGAGGAGATGT
AGGAATCAGAAATGATACAGGGAAGGGGAAGTTGATGGACATAGGAACAAACTTTTTAGT
AGCAGCAGCAGAATACTTGGGATCAACAATAGTGGAGCCAGTATGGCTTAATTATGGAAG
GGAATGGGGTCCAAAAATTAGCTATGATATATCAAAAGAGCTGAGGAAAGTAGAAAGATT
TATGATTGGCAAACTGAAGAAAGCTATTGAGAAAATAGTGAGAGATCTACCAAATGAGGT
TTTGGGCGAGGAAGGACCAATAGGCCCAAAGTTTAAGGACATGTGGAGTGGTGATGAAAG
GGGTTGAACATTGATATCCACAGAAATTTGCTTTGACCCAATATTTTTCTTATCTACTAG
TCATTTCTCTTAAAACAAAAAGTTAATATGGTAAGAAAATAATAACAGTGAAGATTTCTC
AAAATTATGATATTCTCTCTGTATCCTTATAATAAATTAAGTATATATTCTTTAGGCTCT
ATTA