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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g044680.2.1
CDS Infomation

R2R3MYB transcription factor 55
Sequence

ATGGGGAGGCCTTGCTGTTACAAAAAGAAGCTGAGGAAAGGCCTTTGGTGCCCTGAGGAA
GATGAGAAACTTATAAATCATGTAACTAAATATGGTCATGGTTGTTGGAGTTCAGTCCCT
AAACTAGCCGCTCTTCAGAGGTGTGGAAAGAGCTGCAGACTTAGGTGGATTAACTACTTG
AGACCTGACCTCAAAAGAGGAACATTCTCACAACAAGAAGAGAATTTGATCATTCAACTT
CATTCACTTTTAGGGAACAAGTGGTCTCAGATTGCTTCTAGATTACCTGGAAGAACCGAC
AATGAAATCAAGAACTTATGGAACTCTTCTATTAAGAAGAAACTAAGGCAAAAAGGGATT
GATCCAAACACTCATAAACTTCTATCCGTAATTGAGAATGAAGAGAAGGTATCAGCAATC
AGTATGAATATTGAGAAAGTCTCTGAAGGCTCAAGTGAACTGAATATTATTGAGGATTCC
AACTACAGAATTAAATCAAAGTCATCTTTAGTGACAATGACTATGGACAACTATCCTAGT
AATACGACTACTTCTGCAGCGCCACTAACACACAAATTCTTTCTTGAAAGGTTTGTTACC
ACACACGAAACCTCCACCGCTAGCTGCAATAAGCCTCTTGATCAGTTGACAAGTTACCTC
TCCTTTGAGAAATTGAATTATGGTTCAAACATTGGCTTGTCCATAAATTCAAACACCAAC
AATCTCCTTTTAAACTCCAAGAATTCAGAAATGTTTACTCATCAGGTCAATTCTAGCATC
ACAAATGATAATATTCTGACATCTCCAATAGCAGCAATAGCAAGTAATGATTCAATGCGC
AATGGAAGCAGTACTAGTATTGAATTGCAAAGGAACTCTTCTTTCTTCGATAGCAATGCC
TTCTCCTGGGGAACTGCAGATTATGATAAATCAGAAAAAGAAGTCAATATTCATCCCTCC
GTACCTGATCCTGATGACATCAAATGGTCTGAGTATCTCCATACACAACTTTTACCAGGC
AATGCAATCACCAATGATCAAATAACTCAAGATTTATACAGTGCAAAATCAAGCATACAA
TTCACAACACAAGGTTCATTGCTACAGAACCAACAACAACAGCCTTCTTTACAAACTGCA
AACATCTACAATAAGCACTATCAGAGAATTTCAGATTCCTTTGGACAGTTTTCATAG

Peptide Sequence

PEP ID

Solyc10g044680.2.1
PEP Infomation

R2R3MYB transcription factor 55
Sequence

MGRPCCYKKKLRKGLWCPEEDEKLINHVTKYGHGCWSSVPKLAALQRCGKSCRLRWINYL
RPDLKRGTFSQQEENLIIQLHSLLGNKWSQIASRLPGRTDNEIKNLWNSSIKKKLRQKGI
DPNTHKLLSVIENEEKVSAISMNIEKVSEGSSELNIIEDSNYRIKSKSSLVTMTMDNYPS
NTTTSAAPLTHKFFLERFVTTHETSTASCNKPLDQLTSYLSFEKLNYGSNIGLSINSNTN
NLLLNSKNSEMFTHQVNSSITNDNILTSPIAAIASNDSMRNGSSTSIELQRNSSFFDSNA
FSWGTADYDKSEKEVNIHPSVPDPDDIKWSEYLHTQLLPGNAITNDQITQDLYSAKSSIQ
FTTQGSLLQNQQQQPSLQTANIYNKHYQRISDSFGQFS*

Transcript Sequence

Transcript ID

Solyc10g044680.2.1
Transcript Infomation

R2R3MYB transcription factor 55
Sequence

GGTTTTTTATAAAGCTAAAAATCAAATAATGATGTTGTGAAAATGACCTTGAGATTACTA
GTAGTATTATGGTTCCTCCCTTCTATTTATTTGTTTCCAACTCTAATTATGATGATTAAC
ATCTATCCCCTCTAATTAAAACCCTTTTGCACATTTGGTGAAAAAACTTTGCCTTGTTTT
TTGACCTTTTGTTTTGCACATGGGGAGGCCTTGCTGTTACAAAAAGAAGCTGAGGAAAGG
CCTTTGGTGCCCTGAGGAAGATGAGAAACTTATAAATCATGTAACTAAATATGGTCATGG
TTGTTGGAGTTCAGTCCCTAAACTAGCCGCTCTTCAGAGGTGTGGAAAGAGCTGCAGACT
TAGGTGGATTAACTACTTGAGACCTGACCTCAAAAGAGGAACATTCTCACAACAAGAAGA
GAATTTGATCATTCAACTTCATTCACTTTTAGGGAACAAGTGGTCTCAGATTGCTTCTAG
ATTACCTGGAAGAACCGACAATGAAATCAAGAACTTATGGAACTCTTCTATTAAGAAGAA
ACTAAGGCAAAAAGGGATTGATCCAAACACTCATAAACTTCTATCCGTAATTGAGAATGA
AGAGAAGGTATCAGCAATCAGTATGAATATTGAGAAAGTCTCTGAAGGCTCAAGTGAACT
GAATATTATTGAGGATTCCAACTACAGAATTAAATCAAAGTCATCTTTAGTGACAATGAC
TATGGACAACTATCCTAGTAATACGACTACTTCTGCAGCGCCACTAACACACAAATTCTT
TCTTGAAAGGTTTGTTACCACACACGAAACCTCCACCGCTAGCTGCAATAAGCCTCTTGA
TCAGTTGACAAGTTACCTCTCCTTTGAGAAATTGAATTATGGTTCAAACATTGGCTTGTC
CATAAATTCAAACACCAACAATCTCCTTTTAAACTCCAAGAATTCAGAAATGTTTACTCA
TCAGGTCAATTCTAGCATCACAAATGATAATATTCTGACATCTCCAATAGCAGCAATAGC
AAGTAATGATTCAATGCGCAATGGAAGCAGTACTAGTATTGAATTGCAAAGGAACTCTTC
TTTCTTCGATAGCAATGCCTTCTCCTGGGGAACTGCAGATTATGATAAATCAGAAAAAGA
AGTCAATATTCATCCCTCCGTACCTGATCCTGATGACATCAAATGGTCTGAGTATCTCCA
TACACAACTTTTACCAGGCAATGCAATCACCAATGATCAAATAACTCAAGATTTATACAG
TGCAAAATCAAGCATACAATTCACAACACAAGGTTCATTGCTACAGAACCAACAACAACA
GCCTTCTTTACAAACTGCAAACATCTACAATAAGCACTATCAGAGAATTTCAGATTCCTT
TGGACAGTTTTCATAGCCTATTTTTGTGTATGCTTTGAATTGAATGGTTAATACATTATT
TCCCTTTGTAATTCTGTCAATTAAGTGTTCATTCGAAATGCTTTCCTATTCAACCTTAAA
GAATTAGTTGGAAGATTGTGACTATCTGTAAACTAGTCTGAATCCTTTTAAGTTTTCACA
AACTCTTTCATTGATTTTAACCTTTGTACAGGACGCATCTCTATCATAATTGGCCTTTTC
CCTAATTGTACAATTGATGAAAAGCACATACTTCCTTAAATGGTTGTCTATCCTTGTCTC
CTCCTGACGGAGATAGTTTTAACTTTTGACAGTCTTTAAGTCATTACCACTCCCCATAGG
TACTGAACTATATATATGTTATAGCTGTTTGTTTTAGACTATGTTATGTACATCTTTCAC
ATACCTCAAGCCGATCTTTCATACTATTTGGCATACCGTACTTGCGCGAACCTGTATCTG
ATGCATATCCATAACCAAATCCGTATATGACATAAGTTCATAATTAGGTTCATTAACTAT
AGAGCCAGAAGGGAAATGTTTCCGATGTCCTATAGTTTTCTTGAGGCTCCCAAGTGAATA
AAATAAATTCCAACTCGATCTTGGGAAGTTGGAGGGTATCCATCTAAGTGCTTAGTGACT
GGAAATCAAAGCCACCAAATTGATGCAGTCTGTGGACACAAATGCTATATTCTATATCAC
AATCGGGCCAAAGTCAAGTGAAAGCTATCTATATCAGTCAATCATATTCAAGATTATTAT
CACTATAAAAGGTCCACAACTATGTTTTCTGAGGAGGACTGGCCAGGAACCCCCTAAACA
CTTTTACTTTCTTCTTTCCGGTAAAAAATAATTCTACCTTTTGAATGAAATTTGCGCCTA
AGTTAACTTTAACAGTTAGCTCATAAGGTGAAAATTGAGACAAGCTTCAGGAGAAAATCA
CTTTGTATATGGTGGCTTAGTAGTGATTATGATACACTGCTCGCCCGCGCTGTTTAATCT
ACCATCTACTCTTCCGGCTAATAATTGTTGTTTCTCTCTCCAATAAAGTGTTGAATCCA