Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g039360.2.1
CDS Infomation

DUF1639 family protein (AHRD V3.3 *-* G7JHQ0_MEDTR)
Sequence

ATGACTTCTACAGTTCCAGCAAAGTCTAATAACCCACTTCACAACTTTGATTTGCCATAT
TTGAAATGGAAGAAGAATCAGCATTCAAACAATCACCAACGCCGCCGATCCAATAAGCTT
TCTTCAGATTCATCTTCCCCCTCGCCGCAGCGTCACTCTCCAATGCGTGAATCCATGGCG
GCGGCGGCGCGTCAGTCTCCTATGCGTGATTCTGTTGCACGCCAGTCTCCCATGCGGGAA
CCTATTCCGGGGTTTCGTCAGTCTCCCATGCGCGAGTCATCCTCTCCGATGCGTGATTTG
GTTGTGGCAAATCACCGGTCTCCGATGCGTGATTCTTTTGTGGCGTCTCGCCGATCTCCA
ATGAGTGATTCTGTTGTGGCGTCTCGCCGGTCTACGATTCATGATTCGAATGCGGCGGCA
TCTCGACGGTCTCCGATGTCTGAGTTTGTTGCTGCGGCTCGCCAGTCTCCGATCTCGGAA
TCCATTACGGCGTTTCGCCAGTCTTCCATGCGTGATTCCGTGCCTCCACGTCAGTCTCCG
ATGAGGGAGTCTGTGCCGCCGCGTCAGTCTCCAATGCACTGTGAATCTGTTCCTGAATCG
GACAAGGACACAAGTGTTGTTAAGTATCGTAGACATTCACGAATTTCAGCACCTGAGAGT
ACGAAGAAAGGGATCTGTGAGAAATCAGATAAGAACCATAAAGTTTTAGAGGTGGATGCG
GCTGGGAGTAAAGAAGGTAGATCGAAAATCTTGCTCAAAATCCCTCGGAAAAATCATGAA
GAGCATAGGGGTGATGAATCTCAAGAGGTTACTGCAGAAGAGGAGGCTGCTGAAGATACA
GCACTAAAAACGTGGAATCTGAGACCCAGAAAGGCTGTACAAAAGTCATCAAATCTGAAT
GGAGGTCCATTTCGAGCCAGTGGATCGGCTATACAGGAGAACAAATTTCAATCGCCTCAC
ATGAATGTGAACAAGCCACAAAATAGTGAATCCAACCCTCCGAAGAAGGAAAAGAGGCCT
AGGTTTTCGATAGCCCTCTCCAGAGAAGAGATTGATGAAGATATATATGCTATGACTGGA
TCAAAGGCTACAAGAAAACCTAAGAAGAGAGTGAAGAATGTTCAGAAACAACTTGATACC
CTCTTCCCTGGTTTATGGCTAACTTCAATAACTCCTGATTTGTATAAAGTTTGTGAAAAT
GTTCCAAAGGGTTAA

Peptide Sequence

PEP ID

Solyc10g039360.2.1
PEP Infomation

DUF1639 family protein (AHRD V3.3 *-* G7JHQ0_MEDTR)
Sequence

MTSTVPAKSNNPLHNFDLPYLKWKKNQHSNNHQRRRSNKLSSDSSSPSPQRHSPMRESMA
AAARQSPMRDSVARQSPMREPIPGFRQSPMRESSSPMRDLVVANHRSPMRDSFVASRRSP
MSDSVVASRRSTIHDSNAAASRRSPMSEFVAAARQSPISESITAFRQSSMRDSVPPRQSP
MRESVPPRQSPMHCESVPESDKDTSVVKYRRHSRISAPESTKKGICEKSDKNHKVLEVDA
AGSKEGRSKILLKIPRKNHEEHRGDESQEVTAEEEAAEDTALKTWNLRPRKAVQKSSNLN
GGPFRASGSAIQENKFQSPHMNVNKPQNSESNPPKKEKRPRFSIALSREEIDEDIYAMTG
SKATRKPKKRVKNVQKQLDTLFPGLWLTSITPDLYKVCENVPKG*

Transcript Sequence

Transcript ID

Solyc10g039360.2.1
Transcript Infomation

DUF1639 family protein (AHRD V3.3 *-* G7JHQ0_MEDTR)
Sequence

TCAAGTCTCCCATGTGCATCTCCGGATTCAGGGATTGTAAATCAAATAAACTTTCTTCCT
CTATGCACTTTGCTCTTTCACTTGGTGAAGCCTATCTCATTGCCTCTCTTTCTCTCTGTC
TAGGGTTTTCTCTTCCCCAGATAACTTTTCAGCAACTCAATCTTGCTTTATATGTTTAGA
TTTCAGTCACAATGAGAATTTTTTGGACTTGATATACTTGCTTATTTATTATTCTCTTCT
GTTTGATTTGAAGAAAAGATTTGGATATTCTTGTTTGTACTATGACTTCTACAGTTCCAG
CAAAGTCTAATAACCCACTTCACAACTTTGATTTGCCATATTTGAAATGGAAGAAGAATC
AGCATTCAAACAATCACCAACGCCGCCGATCCAATAAGCTTTCTTCAGATTCATCTTCCC
CCTCGCCGCAGCGTCACTCTCCAATGCGTGAATCCATGGCGGCGGCGGCGCGTCAGTCTC
CTATGCGTGATTCTGTTGCACGCCAGTCTCCCATGCGGGAACCTATTCCGGGGTTTCGTC
AGTCTCCCATGCGCGAGTCATCCTCTCCGATGCGTGATTTGGTTGTGGCAAATCACCGGT
CTCCGATGCGTGATTCTTTTGTGGCGTCTCGCCGATCTCCAATGAGTGATTCTGTTGTGG
CGTCTCGCCGGTCTACGATTCATGATTCGAATGCGGCGGCATCTCGACGGTCTCCGATGT
CTGAGTTTGTTGCTGCGGCTCGCCAGTCTCCGATCTCGGAATCCATTACGGCGTTTCGCC
AGTCTTCCATGCGTGATTCCGTGCCTCCACGTCAGTCTCCGATGAGGGAGTCTGTGCCGC
CGCGTCAGTCTCCAATGCACTGTGAATCTGTTCCTGAATCGGACAAGGACACAAGTGTTG
TTAAGTATCGTAGACATTCACGAATTTCAGCACCTGAGAGTACGAAGAAAGGGATCTGTG
AGAAATCAGATAAGAACCATAAAGTTTTAGAGGTGGATGCGGCTGGGAGTAAAGAAGGTA
GATCGAAAATCTTGCTCAAAATCCCTCGGAAAAATCATGAAGAGCATAGGGGTGATGAAT
CTCAAGAGGTTACTGCAGAAGAGGAGGCTGCTGAAGATACAGCACTAAAAACGTGGAATC
TGAGACCCAGAAAGGCTGTACAAAAGTCATCAAATCTGAATGGAGGTCCATTTCGAGCCA
GTGGATCGGCTATACAGGAGAACAAATTTCAATCGCCTCACATGAATGTGAACAAGCCAC
AAAATAGTGAATCCAACCCTCCGAAGAAGGAAAAGAGGCCTAGGTTTTCGATAGCCCTCT
CCAGAGAAGAGATTGATGAAGATATATATGCTATGACTGGATCAAAGGCTACAAGAAAAC
CTAAGAAGAGAGTGAAGAATGTTCAGAAACAACTTGATACCCTCTTCCCTGGTTTATGGC
TAACTTCAATAACTCCTGATTTGTATAAAGTTTGTGAAAATGTTCCAAAGGGTTAAAAGG
AATCCTTCAAAGTTGGTGGTTGTCCTTCGAATGTCCTTTGCTTTTTGTGGAAGTTTGAAG
GTGATGGCTTCCAAATTTTATGATTTCATTTGGAGGAATATGAGACTTCCAGCCTTAAAA
GTTGTTATCCAACACAAATTCTCTTCTCCCAAAAACATTATTTGAGAGGTAGGAGGCAGT
TATAAGCTGATATATGTGAAGGAGGGACCATTTTGAATCCTTCATTTTAAGCATCATCAT
CCATCCCACTTGAGTAACAATCAGTATATCTGTTGAAGTAGGCAGCCTTACACTGGACCT
GGCTTGGTTAAGTTACGAAGATGAAGAACATCATCCAGGTTGCAACATACTGTGTGATTG
TATGATTGCAGATTTAGGTGTTTGGGCACACATGCTTTGTCATTCTCTTTCCCCTCTTTG
TGCATCTGGGTGGGTGGGTGGG