Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g039280.2.1
CDS Infomation	Protein-tyrosine phosphatase mitochondrial 1 (AHRD V3.3 *** A0A0B0MXE1_GOSAR)
Sequence	ATGTATATTGAAGAACTGAAGGAGGAGAGGGAAGTAGTTAACAGGGAGGAGAAGTTTTGT GATGATACTTGTGAAGGTCCATTGGCTGTTTCGGATACGAAAAGGGCTTTGGTTGGAGCG GGGGCTCGTGCTCTTTTTTATCCTACATTGCTGTATAATGTTGTGAGAAACAAGATTCAG ACCGAGTTTCGATGGTGGGATAGGGTTGATGAGTTCATACTGTTAGGAGCTGTTCCATTT CCTACTGATGTCCCTCGCTTGAAGGCTCTAGGTGTTGCTGGAGTGGTCACGTTGAATGAA TCATATGAGACTTTGGTCTCAACGTCATTATATCTTGATCATGACATCAATCACTTGGTG ATTCCTACCAGAGACTATTTTTTTGCACCATCAGATGGAGATATTGACCGAGCTATAGAA TTCATCCACAGTAATGCATCTTGTGGGAAGACAACGTACGTACACTGTAAGGCCGGCCGT GGACGTAGTACAACCATTGTCCTTTGCTACCTGGTCAAACACAAGGACATGACACCTGAG GCTGCTTATGATTATGTCAGATCCATCAGACCAAGGGTGTTGTTGGCCCCCTCTCAGTGG CAGGCTGTTCAAGAATACTACACAAGAGTAAAAAATACTGATAATGATGTTTGTAGAGAT GATAATTCATCGAAAATGCTTGACGTTCCAGCTCAAAAAGAAGTTGCTGTCTTTGATGAT GGCTCGGTTGTTCTAGTCTCTGAATGTGACCTTGATGGATATGATGAAAGTGTTGAGTCA GATCTAACACGTAACGAAGTGTTAGTGGATTTAAACCTTGCATGTAGAGGAGTTCAAGTT GCTCGCCAAGCAGCAATTTCTCGGCTTTCATACCTTTGGCTTCGCTATCATTCAACGAAG AAGCTGGGAAGTATTGGCGTTGACATCCATGTTTATTGA

Peptide Sequence

PEP ID	Solyc10g039280.2.1
PEP Infomation	Protein-tyrosine phosphatase mitochondrial 1 (AHRD V3.3 *** A0A0B0MXE1_GOSAR)
Sequence	MYIEELKEEREVVNREEKFCDDTCEGPLAVSDTKRALVGAGARALFYPTLLYNVVRNKIQ TEFRWWDRVDEFILLGAVPFPTDVPRLKALGVAGVVTLNESYETLVSTSLYLDHDINHLV IPTRDYFFAPSDGDIDRAIEFIHSNASCGKTTYVHCKAGRGRSTTIVLCYLVKHKDMTPE AAYDYVRSIRPRVLLAPSQWQAVQEYYTRVKNTDNDVCRDDNSSKMLDVPAQKEVAVFDD GSVVLVSECDLDGYDESVESDLTRNEVLVDLNLACRGVQVARQAAISRLSYLWLRYHSTK KLGSIGVDIHVY*

Transcript Sequence

Transcript ID	Solyc10g039280.2.1
Transcript Infomation	Protein-tyrosine phosphatase mitochondrial 1 (AHRD V3.3 *** A0A0B0MXE1_GOSAR)
Sequence	TCACCCACTCTAGTCTCTATATGCCCTTTGAACAATTAGATTTCACCTAACAACCAAGAA CCTTTCTTTACCCTATCAATTTAATTTTCTTTTTTTATTTGGAATTCTTGTTTCTTACAT CATTTTTTCTTCCCTTTCGGGGGATTAGGTTTCTTTTTTCTTGTTGTTGTTCTTGTTAAT AAATCAAATATGCTTTGGAAAAGATACATGCTTCAATCCAATTCTTTTTGGGTTTTATCT TGCCGTTGGAATATGTGCAATTTTTGTCCAGTTTAGGTGTTTTGCTGCATTTGGTTTCAG TTTTGGTTTCTGGGTTTTTCTATTCATACTGTATAGGAATAAAGATTGGACCTGTTTATT AAGCTTGAATCCAAATTATTTTTTAGGGTTTTGTTTAGTGCAAATTAGAAAATGTATATT GAAGAACTGAAGGAGGAGAGGGAAGTAGTTAACAGGGAGGAGAAGTTTTGTGATGATACT TGTGAAGGTCCATTGGCTGTTTCGGATACGAAAAGGGCTTTGGTTGGAGCGGGGGCTCGT GCTCTTTTTTATCCTACATTGCTGTATAATGTTGTGAGAAACAAGATTCAGACCGAGTTT CGATGGTGGGATAGGGTTGATGAGTTCATACTGTTAGGAGCTGTTCCATTTCCTACTGAT GTCCCTCGCTTGAAGGCTCTAGGTGTTGCTGGAGTGGTCACGTTGAATGAATCATATGAG ACTTTGGTCTCAACGTCATTATATCTTGATCATGACATCAATCACTTGGTGATTCCTACC AGAGACTATTTTTTTGCACCATCAGATGGAGATATTGACCGAGCTATAGAATTCATCCAC AGTAATGCATCTTGTGGGAAGACAACGTACGTACACTGTAAGGCCGGCCGTGGACGTAGT ACAACCATTGTCCTTTGCTACCTGGTCAAACACAAGGACATGACACCTGAGGCTGCTTAT GATTATGTCAGATCCATCAGACCAAGGGTGTTGTTGGCCCCCTCTCAGTGGCAGGCTGTT CAAGAATACTACACAAGAGTAAAAAATACTGATAATGATGTTTGTAGAGATGATAATTCA TCGAAAATGCTTGACGTTCCAGCTCAAAAAGAAGTTGCTGTCTTTGATGATGGCTCGGTT GTTCTAGTCTCTGAATGTGACCTTGATGGATATGATGAAAGTGTTGAGTCAGATCTAACA CGTAACGAAGTGTTAGTGGATTTAAACCTTGCATGTAGAGGAGTTCAAGTTGCTCGCCAA GCAGCAATTTCTCGGCTTTCATACCTTTGGCTTCGCTATCATTCAACGAAGAAGCTGGGA AGTATTGGCGTTGACATCCATGTTTATTGAGATGTCATATATATCCTAGGCTGTTGTCTG TTGTCCTTTTTATTGGTGGTAATATTAGATGTATCCTCCCACCCCTTTTTCGTGTCCTCT GAGGAACTACATCAAAATTGTTGGAAAAATGTAACTTTGAAGTTGTGAGAAGAGAAAGAT TCAACAAGTGTGCGTAGTTTAATAATATGAAAGTGTTGCGAAAGAGCATAACTGTAATCA GTTGAGTTGTCTTTGTAAGGAAATTCGTATTACTGAATTTTGATGTGTCTAATGCAATAT CTTTTTATTTGAGCACACAGACACTATGTTTGGTTTTGTAAACCATAAAAAAGTGTTACT ATAAAAATAAAACACTCGTGAGATGAATGAAGAGTAGAAGATACTTCATTTAATTTCAAG CTTTTACAATAAACTCAAAAAGAATGAAAAACACATAAATCCCGGAAAGACGAATCATTT AATTCTCCACATGATCTGCCTTGAGAAATGGCACCCTACTAACAGAAGCTGATTTAGGCA AAACATTACCATCAGGTGAAGTCTGATGATCATCTGATTTATACTTGTACCAACAAGCCC AATAAACATAATTTATAAAGTTGAGGCAACTTAGAATAGCCAAAAACCAATAGAAAAGTT GCAAATTGTTATGATCCAAATCTTGTCCATCCAACCATCCTTTTTTACTTGATGAAACTC TTTTAGTAACTGCGTTAATAATGTCAACAAACGCACTGCTCAAAAAGTATCCAAACGATA GTGAAATCCATGTAAATGAAGTAGAAAGTGACCTCATTCCACTAGGTGCTTCTTTGTAGA AAAACTCAAGCATTCCAACTAATGTAAACATATCAGCAA