Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g039190.2.1
CDS Infomation	transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT3G21540.1)
Sequence	ATGGTGAAGGCATATCTCCGATATGAGCCAGCGGCTTCTTTTGGGGTTATAGTATCCGGG GAATCAAATATTGTCTATGACAGCTCCGGCAAGCACTTGCTAGCGGCGGCGTTGGAGAAA ATCGGTATATGGCATGTAAGGCAGGGTCTTTGCACTAAAACCCTAGCTCCTTTACCTTCA TCGGACTCAAAAGGTCCCTCTCTTGCGGTTACATCAATGGCATCCTCTTCATCATCCCAA ATAGCAAGTGGTTATGCTGAAGGAAGCATTAGAATCTGGGATTCTGAGAAAGGTATATGT GAAACCACATTGAATGGGCATAAGGGTGCTGTGACGGCCCTTCGATACAATAAGCTTGGA TCATTACTAGCATCAGGGAGCAAAGATAATGACATTATTTTATGGGATGCAGTGGGTGAG ACTGGCCTGTTCCGCCTTCGGGGACATCGTGATCAGGTTACAGATCTTGTTTTCTTAGAT TTTGATAAAAAACTGGTAACGGCTTCTAAAGACAAGTTTTTGAGGGTGTGGGATCTTGAT ACTCAACATTGCATGCAGATAATAAGTGGCCATCATACTGAAATATGGTCCATAGATATT GACCCCGAGGAAAGATTTCTGGTCACCGGTTCTGCCGACCCTGAACTTCGTTTTTATGCT ATAAAGCATGAGTTAGCTGATGGACAATTGATTGCTAACAAAAATGAAACAGATGTAAAG GACTTGCCTGCTGAAAATAAATGGGAAGTACTGAAGTCATTTGGTGAAATTCAGCGTCAA AGCAAGGATAGAGTTGCAACAGTGAGGTTTAACAAGTCTGGAAATCTGCTGGCTTGTCAA GTTGCAGGGAAGACAGTGGAAATATTCCGTGTGCTGGATGAGTCTGAATCTAAACGCAAA GCGAAAAGAAGAATCAGCAGGAAGAAGGAGAAGAAATCTTCGAAACAAGGCCTTGAGGCA ACGGAAAAAGGAGAGACAAATATTGGAGCTGAAGGAGGCAACAATCCTGTTGTTACAGTC CTGGATATCTTCAAGCTTCATCAGACCCTACGGGCTGGAAAGAAGATCTCCTCAATTTCT TTCTCCCCAGTTGCTTCAAAGAATTTACTGGCTACCTTAGCTTTGTCTTTGAATAATAAT TTGTTGGAATTTCATGCAATAGAAAGCAATTCAACTAGTAAATTGAGTGCTATTGAGCTT CAGGGGCATCGTGCTGATGTCAGAAGTGTAACTCTCAGCTCAGATAACACTCTATTGATG TCAACTAGTCACAGTGCAATTAAAATATGGAACCCTACTACTGGTTCTTGCCTCCGCACA ATTGATTCAGGATATGGTCTTTGTGGACTCTTTGTTCCGGGCAACAAGTATGCTGTTGTT GGTACAAAGGGTGGGACCCTAGAATTTATTGACGTTAGAAGTGGTACTTGTGTGGACGTA GTGGAAGCCCATGGTGGATCTGTTCAGTCAATTGCCTTGACTCCAGATGGGACAGGTTTT CTAACTGGCAGTGCCGACCACGACATTAAATTCTGGGAATTTCAAATGGTGCAGAAGTCT GGTGAAGGGTCTAAGCATTTAACTGCATCTCCGACAAGTAGTTTAAAAATGAATGATGAT GTTCTAGTTGTTGCTGCGAGCCCTGATGGTAAATTTATTGCTGTTGCCTTGTTGGATAGC ACAGTAAAGGTCTACTATATGGATTCACTCAAGTTCTTCCTATCACTCTATGGACATAAG TTGCCTGTATTGTGCATGGATATTTCTTCAGATGGTGATCTGCTTGTCAGCGGCTCTGCG GACAAAAATGTGAAGATTTGGGGTTTAGATTTCGGGGACTGTCACAAGTCACTTTTTGCG CATGCTGATAGTGTTATGGGAGTTAAGTTTGTGCGCAACACCCATTACTTTTTCACAGTG GGGAAAGATCGCTTGGTGAAGTACTGGGATGCTGATAAGTTTGAGTTACTTTTAACCCTG GAAGGTCACCACGCGGAAGTTTGGTGTCTTGCTATGAGCAACCGTGGGGATTTCATCGTT ACTGGATCTCATGATCGGTCAATACGCCGTTGGGATCGTACTGATGAGCCCTTTTTTATT GAGGAAGAGAAAGAAAAGAGATTGGAAGAGATGTTTGAATCAGACATTGACAATGCATTT GAGAATAAGTATGGATCAAAGGAAGAAATTCCAGAGGAGGGAGCTGTGGCATTAGCAGGG AAAAAGACTCAAGAAACTCTTACTGCCACAGATTCGATCATTGAAGCACTGGACATGGCA GATGCAGAACTGAAGCGAATCACTGAACATGAGGAGGACAAAACAAAGGGCAGAGTTTCA GAATTCAGGTCTAATATTCTCATGCTCGGGCTATCTCCTTCTGATTATGTTCTTCGTGCA TTGTCTAGTGTGCATACTAATGATCTGGAGCAAACTTTAATGGCCTTACCCTTCTCTGAT GCTTTGGATCTCTTGTCGTACCTGGAGAGTTGGGCCTCTGCAATCGATAAGGTGGAGCTT GTTGGTAGGGTTGCAGTACTGCTAGTGCAACTTCATCATCACCAATTGGTTTCAACTGTC TCTGCCAGACCCCTCATTACCCGTCTAAGCGACAGTCTTGCTGCAAAAGTCAAAGAACGC AAAGATATTATGGGTTTCAACCTTGCTGGAATGGATCATTCCACGCAATTTATGTCTTCA CGTTCGGATGCTGTATTTCGAGATAAAAAGACTAAATTATTGGAGATACGCGCACACAAT GATAAACGTACTGAAGAAAGGGAAGATACGAAACAAGAGAAGAAGAGAAAGAAGAAACAA AAGAAGTCGGATGGAGGACATGTTTGGTCATGA

Peptide Sequence

PEP ID	Solyc10g039190.2.1
PEP Infomation	transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT3G21540.1)
Sequence	MVKAYLRYEPAASFGVIVSGESNIVYDSSGKHLLAAALEKIGIWHVRQGLCTKTLAPLPS SDSKGPSLAVTSMASSSSSQIASGYAEGSIRIWDSEKGICETTLNGHKGAVTALRYNKLG SLLASGSKDNDIILWDAVGETGLFRLRGHRDQVTDLVFLDFDKKLVTASKDKFLRVWDLD TQHCMQIISGHHTEIWSIDIDPEERFLVTGSADPELRFYAIKHELADGQLIANKNETDVK DLPAENKWEVLKSFGEIQRQSKDRVATVRFNKSGNLLACQVAGKTVEIFRVLDESESKRK AKRRISRKKEKKSSKQGLEATEKGETNIGAEGGNNPVVTVLDIFKLHQTLRAGKKISSIS FSPVASKNLLATLALSLNNNLLEFHAIESNSTSKLSAIELQGHRADVRSVTLSSDNTLLM STSHSAIKIWNPTTGSCLRTIDSGYGLCGLFVPGNKYAVVGTKGGTLEFIDVRSGTCVDV VEAHGGSVQSIALTPDGTGFLTGSADHDIKFWEFQMVQKSGEGSKHLTASPTSSLKMNDD VLVVAASPDGKFIAVALLDSTVKVYYMDSLKFFLSLYGHKLPVLCMDISSDGDLLVSGSA DKNVKIWGLDFGDCHKSLFAHADSVMGVKFVRNTHYFFTVGKDRLVKYWDADKFELLLTL EGHHAEVWCLAMSNRGDFIVTGSHDRSIRRWDRTDEPFFIEEEKEKRLEEMFESDIDNAF ENKYGSKEEIPEEGAVALAGKKTQETLTATDSIIEALDMADAELKRITEHEEDKTKGRVS EFRSNILMLGLSPSDYVLRALSSVHTNDLEQTLMALPFSDALDLLSYLESWASAIDKVEL VGRVAVLLVQLHHHQLVSTVSARPLITRLSDSLAAKVKERKDIMGFNLAGMDHSTQFMSS RSDAVFRDKKTKLLEIRAHNDKRTEEREDTKQEKKRKKKQKKSDGGHVWS*

Transcript Sequence

Transcript ID	Solyc10g039190.2.1
Transcript Infomation	transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT3G21540.1)
Sequence	GCTTAAAATTTGTGTAGTCAATAATATAAATTACACACATAATAGTTTTAATATAAATTT ACGCTGCTATTGAAAATAGAAGAAGAGACGAACAGAGCTAAAACCCTAAACCCTAGCTCT GATAAGTTCACACCATTGCTGAAGAAAAACAAAAGTAACAGAGTAACCAATGGTGAAGGC ATATCTCCGATATGAGCCAGCGGCTTCTTTTGGGGTTATAGTATCCGGGGAATCAAATAT TGTCTATGACAGCTCCGGCAAGCACTTGCTAGCGGCGGCGTTGGAGAAAATCGGTATATG GCATGTAAGGCAGGGTCTTTGCACTAAAACCCTAGCTCCTTTACCTTCATCGGACTCAAA AGGTCCCTCTCTTGCGGTTACATCAATGGCATCCTCTTCATCATCCCAAATAGCAAGTGG TTATGCTGAAGGAAGCATTAGAATCTGGGATTCTGAGAAAGGTATATGTGAAACCACATT GAATGGGCATAAGGGTGCTGTGACGGCCCTTCGATACAATAAGCTTGGATCATTACTAGC ATCAGGGAGCAAAGATAATGACATTATTTTATGGGATGCAGTGGGTGAGACTGGCCTGTT CCGCCTTCGGGGACATCGTGATCAGGTTACAGATCTTGTTTTCTTAGATTTTGATAAAAA ACTGGTAACGGCTTCTAAAGACAAGTTTTTGAGGGTGTGGGATCTTGATACTCAACATTG CATGCAGATAATAAGTGGCCATCATACTGAAATATGGTCCATAGATATTGACCCCGAGGA AAGATTTCTGGTCACCGGTTCTGCCGACCCTGAACTTCGTTTTTATGCTATAAAGCATGA GTTAGCTGATGGACAATTGATTGCTAACAAAAATGAAACAGATGTAAAGGACTTGCCTGC TGAAAATAAATGGGAAGTACTGAAGTCATTTGGTGAAATTCAGCGTCAAAGCAAGGATAG AGTTGCAACAGTGAGGTTTAACAAGTCTGGAAATCTGCTGGCTTGTCAAGTTGCAGGGAA GACAGTGGAAATATTCCGTGTGCTGGATGAGTCTGAATCTAAACGCAAAGCGAAAAGAAG AATCAGCAGGAAGAAGGAGAAGAAATCTTCGAAACAAGGCCTTGAGGCAACGGAAAAAGG AGAGACAAATATTGGAGCTGAAGGAGGCAACAATCCTGTTGTTACAGTCCTGGATATCTT CAAGCTTCATCAGACCCTACGGGCTGGAAAGAAGATCTCCTCAATTTCTTTCTCCCCAGT TGCTTCAAAGAATTTACTGGCTACCTTAGCTTTGTCTTTGAATAATAATTTGTTGGAATT TCATGCAATAGAAAGCAATTCAACTAGTAAATTGAGTGCTATTGAGCTTCAGGGGCATCG TGCTGATGTCAGAAGTGTAACTCTCAGCTCAGATAACACTCTATTGATGTCAACTAGTCA CAGTGCAATTAAAATATGGAACCCTACTACTGGTTCTTGCCTCCGCACAATTGATTCAGG ATATGGTCTTTGTGGACTCTTTGTTCCGGGCAACAAGTATGCTGTTGTTGGTACAAAGGG TGGGACCCTAGAATTTATTGACGTTAGAAGTGGTACTTGTGTGGACGTAGTGGAAGCCCA TGGTGGATCTGTTCAGTCAATTGCCTTGACTCCAGATGGGACAGGTTTTCTAACTGGCAG TGCCGACCACGACATTAAATTCTGGGAATTTCAAATGGTGCAGAAGTCTGGTGAAGGGTC TAAGCATTTAACTGCATCTCCGACAAGTAGTTTAAAAATGAATGATGATGTTCTAGTTGT TGCTGCGAGCCCTGATGGTAAATTTATTGCTGTTGCCTTGTTGGATAGCACAGTAAAGGT CTACTATATGGATTCACTCAAGTTCTTCCTATCACTCTATGGACATAAGTTGCCTGTATT GTGCATGGATATTTCTTCAGATGGTGATCTGCTTGTCAGCGGCTCTGCGGACAAAAATGT GAAGATTTGGGGTTTAGATTTCGGGGACTGTCACAAGTCACTTTTTGCGCATGCTGATAG TGTTATGGGAGTTAAGTTTGTGCGCAACACCCATTACTTTTTCACAGTGGGGAAAGATCG CTTGGTGAAGTACTGGGATGCTGATAAGTTTGAGTTACTTTTAACCCTGGAAGGTCACCA CGCGGAAGTTTGGTGTCTTGCTATGAGCAACCGTGGGGATTTCATCGTTACTGGATCTCA TGATCGGTCAATACGCCGTTGGGATCGTACTGATGAGCCCTTTTTTATTGAGGAAGAGAA AGAAAAGAGATTGGAAGAGATGTTTGAATCAGACATTGACAATGCATTTGAGAATAAGTA TGGATCAAAGGAAGAAATTCCAGAGGAGGGAGCTGTGGCATTAGCAGGGAAAAAGACTCA AGAAACTCTTACTGCCACAGATTCGATCATTGAAGCACTGGACATGGCAGATGCAGAACT GAAGCGAATCACTGAACATGAGGAGGACAAAACAAAGGGCAGAGTTTCAGAATTCAGGTC TAATATTCTCATGCTCGGGCTATCTCCTTCTGATTATGTTCTTCGTGCATTGTCTAGTGT GCATACTAATGATCTGGAGCAAACTTTAATGGCCTTACCCTTCTCTGATGCTTTGGATCT CTTGTCGTACCTGGAGAGTTGGGCCTCTGCAATCGATAAGGTGGAGCTTGTTGGTAGGGT TGCAGTACTGCTAGTGCAACTTCATCATCACCAATTGGTTTCAACTGTCTCTGCCAGACC CCTCATTACCCGTCTAAGCGACAGTCTTGCTGCAAAAGTCAAAGAACGCAAAGATATTAT GGGTTTCAACCTTGCTGGAATGGATCATTCCACGCAATTTATGTCTTCACGTTCGGATGC TGTATTTCGAGATAAAAAGACTAAATTATTGGAGATACGCGCACACAATGATAAACGTAC TGAAGAAAGGGAAGATACGAAACAAGAGAAGAAGAGAAAGAAGAAACAAAAGAAGTCGGA TGGAGGACATGTTTGGTCATGATCTTTTCTACCACGCTTGTACCTTTCTATATGCCTTCA CTTGTTAGTGTTTCCTCTGGAGGGGATAGAAGGGTAGGGGTAACAATTTTGGTTATACAA CTTCAGCAAGTATGATAAAAAAAAAGCTTTCATATACAATTTGTATATAATGTTGTTATT GATTTGTAAAGACTTTTGTAGCCCTAACTAGCAATTGCTACATTATTACCAATCGTACTG AATTGCAGCATGATGAGTTTTGTTTTCTTAAATGGCAACAGCTTTGTACTGATAA