Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g019040.2.1
CDS Infomation

Kinetochore protein nuf2, putative (AHRD V3.3 *** B9STF6_RICCO)
Sequence

ATGTCGAGATTTGATTACCCAACACTCCCCCGACAAGACATCATCGCTGTATTAGGGGAA
GCTCAAATAGCGTCTGTCTCCGACGAAGATCTCATCAAACCCACTCCCGACTTTGTCACT
AAACTCTACTCCAGCATTCTTCTCCATATCGATACTCTACAGGATGATCATGATCAGGTG
GATTTCTCCGCTCTGGAATACCTTGAGAACCCGGATCTTCATGTCGACTCTTTTCGGACT
ATTAATTTGTTTCATAAGATAAGGAACATGTTGTCTGCTTTGGGTTGTCCAGAGATATTT
ACTCTAAGAGATTTGATCAAGCCTGACCCTGATCGTACCCGCTTCTTTGTCGGAGCCATC
CTCAACTTTTGTCTTCACAGGGACACTAAATTAAATGCTATAAGGCCGATTGTGGAAGAT
CTGACTCTCATTGATGAACAACGACTAGCTCTGGAGGCTAGAATATCTCAGTTAAATGAA
GAGATTGCAGTACAAAATGAATCAAGAGAAAGGGAGATGCCTTTGGTTCAAGAAATAGAT
TCTAATGTTAAGGAACTGAGGCAAACAATTTCTGGTCTTAACAATCACCAAATGTCGTTG
AAGGCCTCAATAAGAAAACTTAAGGAAAGGGCTAAAGAGATAGATGAAAAGATTTCTAAT
GCAGACTTTGCATTGGTACAAGCTGTTCATGACAATGCCAATTTGCGTTCTAAGATTGTC
CAATCACCAGATAAGCTTCAGAGAGCTCTGGAGGAAAAGAAATCATTTCAAGCTGAGATA
AGGAATGCTGAAAGAGCAGCAATGCAGTCTTTTCAAGATAAAACAGCAATTCTTGAGGTT
TATACAAAGGCTTACAAGAAAATGTCCAAGAACTTCAATCAGATGCAGGCTATACAGGAG
CAGGTTAATTCAACTAAATCTATTGAGAAAGATGTTAAGGTTCTCAAACTAAAGCTGAGT
GATGAAGAAGTACAGGAAAAGTCCCTTGAAGCTAAATTAGTAGAAAGGCAAGGAAAAGCG
GACCAATTGGAAGAATTAAGAAAGCAATTAGAGAAAGAAAGAAATCTTAGTTTTGAGGAG
GCTAACAAAGAATTGAAAAATGTTAAGTTGGAAGTGGAATCAAAGAGGCATGGTCTTGAA
GCAAGGCAAAATGACTTGGAAGGTGTACTTGCAGAGGCGGATGCAATAACTGAAAGAATT
AACTCAGTAAGGGAGTCTGGAGCATTAAAATGCCAAGAATTGGACCGTAATTGCGAGGAA
GTCATAGCAGAGTTTTATCGCCACTCAAGCTCAATCAAAGACTTGCTACCGGACATTGAA
GTGGACCAGGCAAGTGTTGAGAAAAAAGGAGTTGATCTTTAG

Peptide Sequence

PEP ID

Solyc10g019040.2.1
PEP Infomation

Kinetochore protein nuf2, putative (AHRD V3.3 *** B9STF6_RICCO)
Sequence

MSRFDYPTLPRQDIIAVLGEAQIASVSDEDLIKPTPDFVTKLYSSILLHIDTLQDDHDQV
DFSALEYLENPDLHVDSFRTINLFHKIRNMLSALGCPEIFTLRDLIKPDPDRTRFFVGAI
LNFCLHRDTKLNAIRPIVEDLTLIDEQRLALEARISQLNEEIAVQNESREREMPLVQEID
SNVKELRQTISGLNNHQMSLKASIRKLKERAKEIDEKISNADFALVQAVHDNANLRSKIV
QSPDKLQRALEEKKSFQAEIRNAERAAMQSFQDKTAILEVYTKAYKKMSKNFNQMQAIQE
QVNSTKSIEKDVKVLKLKLSDEEVQEKSLEAKLVERQGKADQLEELRKQLEKERNLSFEE
ANKELKNVKLEVESKRHGLEARQNDLEGVLAEADAITERINSVRESGALKCQELDRNCEE
VIAEFYRHSSSIKDLLPDIEVDQASVEKKGVDL*

Transcript Sequence

Transcript ID

Solyc10g019040.2.1
Transcript Infomation

Kinetochore protein nuf2, putative (AHRD V3.3 *** B9STF6_RICCO)
Sequence

GCTCTTCTCTTCCTCTACTCCTCTTTAGCGTGCCACGCAGCTCCAACCAGCAGCGACTAG
TGAGAGAGGGCAGCGTTGCAACCGGAGACAACCGCCAGCAGCCAGCCTGAGCCGGACAAC
GCTGTTTTCTCTCTTCTCTTTTCCGGCGAACCCCACCAGCAGCAGCGACCGTCGAGGACC
ACCGCGAAGCAGCAACTTGGGTAAGGAGCCATCAGCGAAAACCTGCAAACAAATAGCTCC
AACAGGAAGTATCAGCAACTCCGGTAAACGCAATATTAAAAGCAGCAACAGCAGCTCAAA
ACAGCTCTGGCCAAGCAAGCTCCGGCGAAGTCCAAAATTTTGGATTGGTGGAAGACGGAT
CTATCTCCGGCCACTCACACTCAGGAAGCTCAACATCTAAAAAAGTTAATACAAGATTAT
ACTTCTTCTTTCATCAAAGTAGGAGATAAGTTGAACCCGATTCAGAAAGTGGTGATTCGC
AAAAGAAGAGTGAAATGTCGAGATTTGATTACCCAACACTCCCCCGACAAGACATCATCG
CTGTATTAGGGGAAGCTCAAATAGCGTCTGTCTCCGACGAAGATCTCATCAAACCCACTC
CCGACTTTGTCACTAAACTCTACTCCAGCATTCTTCTCCATATCGATACTCTACAGGATG
ATCATGATCAGGTGGATTTCTCCGCTCTGGAATACCTTGAGAACCCGGATCTTCATGTCG
ACTCTTTTCGGACTATTAATTTGTTTCATAAGATAAGGAACATGTTGTCTGCTTTGGGTT
GTCCAGAGATATTTACTCTAAGAGATTTGATCAAGCCTGACCCTGATCGTACCCGCTTCT
TTGTCGGAGCCATCCTCAACTTTTGTCTTCACAGGGACACTAAATTAAATGCTATAAGGC
CGATTGTGGAAGATCTGACTCTCATTGATGAACAACGACTAGCTCTGGAGGCTAGAATAT
CTCAGTTAAATGAAGAGATTGCAGTACAAAATGAATCAAGAGAAAGGGAGATGCCTTTGG
TTCAAGAAATAGATTCTAATGTTAAGGAACTGAGGCAAACAATTTCTGGTCTTAACAATC
ACCAAATGTCGTTGAAGGCCTCAATAAGAAAACTTAAGGAAAGGGCTAAAGAGATAGATG
AAAAGATTTCTAATGCAGACTTTGCATTGGTACAAGCTGTTCATGACAATGCCAATTTGC
GTTCTAAGATTGTCCAATCACCAGATAAGCTTCAGAGAGCTCTGGAGGAAAAGAAATCAT
TTCAAGCTGAGATAAGGAATGCTGAAAGAGCAGCAATGCAGTCTTTTCAAGATAAAACAG
CAATTCTTGAGGTTTATACAAAGGCTTACAAGAAAATGTCCAAGAACTTCAATCAGATGC
AGGCTATACAGGAGCAGGTTAATTCAACTAAATCTATTGAGAAAGATGTTAAGGTTCTCA
AACTAAAGCTGAGTGATGAAGAAGTACAGGAAAAGTCCCTTGAAGCTAAATTAGTAGAAA
GGCAAGGAAAAGCGGACCAATTGGAAGAATTAAGAAAGCAATTAGAGAAAGAAAGAAATC
TTAGTTTTGAGGAGGCTAACAAAGAATTGAAAAATGTTAAGTTGGAAGTGGAATCAAAGA
GGCATGGTCTTGAAGCAAGGCAAAATGACTTGGAAGGTGTACTTGCAGAGGCGGATGCAA
TAACTGAAAGAATTAACTCAGTAAGGGAGTCTGGAGCATTAAAATGCCAAGAATTGGACC
GTAATTGCGAGGAAGTCATAGCAGAGTTTTATCGCCACTCAAGCTCAATCAAAGACTTGC
TACCGGACATTGAAGTGGACCAGGCAAGTGTTGAGAAAAAAGGAGTTGATCTTTAGCTAT
ATCTTACTCTTCTATGTCTTCTTATTTATTAGAAATATTTTATTTTTTAATATTAATATT
AGAAGTGGGAGTTTAAGAGGACGAATGCTGTATTCACTAAATGTAAAAAAGGTAGTAGGG
GTTGTACTCTTTTCTTGAATAGTTTTGGACCTATTTGATTGTCAATTGTATTATTATGTT
TCTCCATGTATTTCACTTAACTTTACCAAGTATAGATGAATCTCACCATGTTCTTCTAAT
CAGTTAATTCTGCGTCATAATTTGGAAAAATTTAAA