Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g018300.2.1
CDS Infomation

Transketolase (AHRD V3.3 *** AT3G60750.1)
Sequence

ATGGGATGTGCTCCAATGGGTCATATATTGTATGATGAAGTAATGAAATATAACCCCAAG
AATCCTTACTGGTTTAATCGTGACCGATTTGTTCTATCTGCTGGTCATGGTTGTATGCTG
CAATATGCGCTTCTTCATCTTGCTGGTTACGACTCTGTTCAGGAAGACGATTTGAAAAGT
TTCCGTCAATGGGGAAGCAAAATTCCGGGTCACCCTGAGAATTTTGAGACACCTGGTGTT
GAAGTCACTACTGGTCCTCTGGGGCAAGGTATTGCCAATGCTGTTGGATTGGCTGTTGCC
GAGAAGCACTTGGCTGCTCGATTCAACAAGCCTGATGCTGAGATTGTTGACCACTATACA
TATGTTATACTTGGGGATGGTTGTCAGATGGAGGGTATCTCAAATGAAGCTTGTTCCCTT
GCTGGCCATTGGGGACTTGGAAAGCTGATTGCTTTCTATGACGATAATCACATTTCCATT
GACGGAGACACAGAAATTGCTTTCACTGAGGATGTTTCTGCTCGTTTCGAGGCTCTAGGA
TGGCACGTGATCTGGGTGAAGAATGGTAACACGGGTTATGATGAGATTCGTGCAGCTATT
AAGGAAGCTAAATCTGTCAAAGACAAACCTACTATGATCAAGGTAACTACAACGATTGGT
TTTGGCTCTCCTAACAAGGCAAACTCTTACAGTGTGCACGGTAGTGCACTTGGAGCAAAG
GAAGTCGAGGCAACTAGAAATAACCTGGGATGGCCTTATGAGCCTTTCCATGTGCCTGAA
GATGTGAAGAGCCATTGGAGCCGTCATACACCGGAGGGTGCTGCCCTAGAAACTGAATGG
AATGCTAAGTTTGCTGAATATGAGAAGAAGTATGCAGAGGAAGCTGCAGATTTGAAATCC
ATCATTACTGGTGAACTACCTGCTGGCTGGGAGAAAGCTCTTCCTACTTACACTCCCGAG
AGCCCAGCTGATGCCACGAGAAACTTGTCACAACAAAACCTTAATGCTCTTGCCAAGGTT
GTACCTGGTTTCCTTGGTGGTAGTGCTGATCTTGCTTCATCAAACATGACTCTTTTGAAA
ATGTTTGGTGACTTCCAAAAGAACACTCCAGAAGAGCGTAACTTAAGGTTTGGTGTTCGT
GAACATGGTATGGGAGCGATATGTAATGGGATTGCTCTACACAGCCTTGGCTTGATCCCG
TATTGTGCTACTTTCTTTGTGTTCACTGACTACATGAGAGGAGCCATGAGAATATCAGCC
TTGTCTGAAGCTGGAGTTATTTATGTTATGACTCACGATTCAATTGGTCTAGGAGAAGAC
GGTCCAACTCATCAACCCATTGAGCACTTGGCTAGTTTCCGTGCCATGCCAAACATTCTG
ATGTTCCGTCCAGCAGATGGTAATGAGACAGCAGGAGCTTACAAGGTGGCTGTCCTTAAG
AGGAAAACACCATCAATCCTTGCCCTCTCTCGGCAAAAGTTGCCACAACTTGCGGGAACT
TCTATTGAAGGAGCAGCAAAGGGTGGCTACATTGTATCAGACAATTCTTCAGGCAACAAA
CCTGATGTCATTTTGATCGGTACTGGTTCCGAGTTGGAAATTGCTGTCAAGGCTGCTGAG
GAACTAAAGAAAGAAGGAAAGACAGTGAGGGTTGTTTCCTTTGTTTGTTGGGAGCTTTAT
GATGAACAATCAGCTGAATACAAGGAAAGTGTCCTTCCATCATCTGTTACAGCTAGAGTT
AGTATTGAAGCTGGATCAACATTCGGGTGGCAAAAATTTGTTGGCGATAAAGGAAAAGCT
ATTGGGGTTGACGGGTTTGGTGCTAGTGCTCCTGCTGATAAGATATACAAAGAGTTTGGT
ATTACAGCAGAAGCTGTTGTAGCTGCAGCTAAACAAGTTTCTTAG

Peptide Sequence

PEP ID

Solyc10g018300.2.1
PEP Infomation

Transketolase (AHRD V3.3 *** AT3G60750.1)
Sequence

MGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKS
FRQWGSKIPGHPENFETPGVEVTTGPLGQGIANAVGLAVAEKHLAARFNKPDAEIVDHYT
YVILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTEDVSARFEALG
WHVIWVKNGNTGYDEIRAAIKEAKSVKDKPTMIKVTTTIGFGSPNKANSYSVHGSALGAK
EVEATRNNLGWPYEPFHVPEDVKSHWSRHTPEGAALETEWNAKFAEYEKKYAEEAADLKS
IITGELPAGWEKALPTYTPESPADATRNLSQQNLNALAKVVPGFLGGSADLASSNMTLLK
MFGDFQKNTPEERNLRFGVREHGMGAICNGIALHSLGLIPYCATFFVFTDYMRGAMRISA
LSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMFRPADGNETAGAYKVAVLK
RKTPSILALSRQKLPQLAGTSIEGAAKGGYIVSDNSSGNKPDVILIGTGSELEIAVKAAE
ELKKEGKTVRVVSFVCWELYDEQSAEYKESVLPSSVTARVSIEAGSTFGWQKFVGDKGKA
IGVDGFGASAPADKIYKEFGITAEAVVAAAKQVS*

Transcript Sequence

Transcript ID

Solyc10g018300.2.1
Transcript Infomation

Transketolase (AHRD V3.3 *** AT3G60750.1)
Sequence

TTCTCCACTTTTTCTGGCCTTAAATCCACCCCTTTCACTTCCTCTCACCGTCGTATTCTT
CCTTCCACTACCGTCACTAAACAGCACTTCTCTGTTCGTGCATCCTCAGCTGTAGAGACT
TTAGAGAAAACTGATGCAGCCATTGTTGAAAAATCTGTTAACACCATTCGATTTTTGGCT
ATTGATGCTGTTGAAAAAGCTAATTCCGGTCATCCCGGTTTACCCATGGGATGTGCTCCA
ATGGGTCATATATTGTATGATGAAGTAATGAAATATAACCCCAAGAATCCTTACTGGTTT
AATCGTGACCGATTTGTTCTATCTGCTGGTCATGGTTGTATGCTGCAATATGCGCTTCTT
CATCTTGCTGGTTACGACTCTGTTCAGGAAGACGATTTGAAAAGTTTCCGTCAATGGGGA
AGCAAAATTCCGGGTCACCCTGAGAATTTTGAGACACCTGGTGTTGAAGTCACTACTGGT
CCTCTGGGGCAAGGTATTGCCAATGCTGTTGGATTGGCTGTTGCCGAGAAGCACTTGGCT
GCTCGATTCAACAAGCCTGATGCTGAGATTGTTGACCACTATACATATGTTATACTTGGG
GATGGTTGTCAGATGGAGGGTATCTCAAATGAAGCTTGTTCCCTTGCTGGCCATTGGGGA
CTTGGAAAGCTGATTGCTTTCTATGACGATAATCACATTTCCATTGACGGAGACACAGAA
ATTGCTTTCACTGAGGATGTTTCTGCTCGTTTCGAGGCTCTAGGATGGCACGTGATCTGG
GTGAAGAATGGTAACACGGGTTATGATGAGATTCGTGCAGCTATTAAGGAAGCTAAATCT
GTCAAAGACAAACCTACTATGATCAAGGTAACTACAACGATTGGTTTTGGCTCTCCTAAC
AAGGCAAACTCTTACAGTGTGCACGGTAGTGCACTTGGAGCAAAGGAAGTCGAGGCAACT
AGAAATAACCTGGGATGGCCTTATGAGCCTTTCCATGTGCCTGAAGATGTGAAGAGCCAT
TGGAGCCGTCATACACCGGAGGGTGCTGCCCTAGAAACTGAATGGAATGCTAAGTTTGCT
GAATATGAGAAGAAGTATGCAGAGGAAGCTGCAGATTTGAAATCCATCATTACTGGTGAA
CTACCTGCTGGCTGGGAGAAAGCTCTTCCTACTTACACTCCCGAGAGCCCAGCTGATGCC
ACGAGAAACTTGTCACAACAAAACCTTAATGCTCTTGCCAAGGTTGTACCTGGTTTCCTT
GGTGGTAGTGCTGATCTTGCTTCATCAAACATGACTCTTTTGAAAATGTTTGGTGACTTC
CAAAAGAACACTCCAGAAGAGCGTAACTTAAGGTTTGGTGTTCGTGAACATGGTATGGGA
GCGATATGTAATGGGATTGCTCTACACAGCCTTGGCTTGATCCCGTATTGTGCTACTTTC
TTTGTGTTCACTGACTACATGAGAGGAGCCATGAGAATATCAGCCTTGTCTGAAGCTGGA
GTTATTTATGTTATGACTCACGATTCAATTGGTCTAGGAGAAGACGGTCCAACTCATCAA
CCCATTGAGCACTTGGCTAGTTTCCGTGCCATGCCAAACATTCTGATGTTCCGTCCAGCA
GATGGTAATGAGACAGCAGGAGCTTACAAGGTGGCTGTCCTTAAGAGGAAAACACCATCA
ATCCTTGCCCTCTCTCGGCAAAAGTTGCCACAACTTGCGGGAACTTCTATTGAAGGAGCA
GCAAAGGGTGGCTACATTGTATCAGACAATTCTTCAGGCAACAAACCTGATGTCATTTTG
ATCGGTACTGGTTCCGAGTTGGAAATTGCTGTCAAGGCTGCTGAGGAACTAAAGAAAGAA
GGAAAGACAGTGAGGGTTGTTTCCTTTGTTTGTTGGGAGCTTTATGATGAACAATCAGCT
GAATACAAGGAAAGTGTCCTTCCATCATCTGTTACAGCTAGAGTTAGTATTGAAGCTGGA
TCAACATTCGGGTGGCAAAAATTTGTTGGCGATAAAGGAAAAGCTATTGGGGTTGACGGG
TTTGGTGCTAGTGCTCCTGCTGATAAGATATACAAAGAGTTTGGTATTACAGCAGAAGCT
GTTGTAGCTGCAGCTAAACAAGTTTCTTAGGCGATGTCCATTACAATTCTTGCTGGTCTA
CTCTACTGAATGAGATAATGAATTGAGACGACATCAAATGGATAATAAATCTAAGATTAG
GATAGAAATTAGGCACATTGATGTACCTAAACTTGTACACTACATATGTTGAGTTTGTAA
TTTCATTTTGGTTCATTGGTAAAGATGTCGCTTTCGCCATTAGAGTTTCATGTGTCTATG
GCAATGAGATTTTTTTTCTTCATTTTAATCCATTTGGGGCATTCAACATTCTGATTTT