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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g018260.1.1
CDS Infomation

UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** GAE4_ARATH)
Sequence

ATGTCCTCAATGAAGCACGTTGACAATATTCCATCAACCCCAGGAAAGTTTAAGGAAAAA
TCCCATTATAATAGGCTTAGGCTTCATTTTTCTGTAGCCAAGCTTACATTTTGGTCATTT
GTGTTCTTGGGTTTGATCTTTATATGTTTTTTTAAATCAACATCTTCATCTTCATCCCCT
GTATCTTCAGATCTCTCAAGAAGATCTCTTAGAACAAGTTCTTATGATGGTCCAGCTTGG
GAGAAAAGGATTAAAGCCTCAGCAAAAATCAGGTCAACAAATGGTATTTCTGTTTTGGTT
ACTGGTGCTGCTGGTTTTGTAGGTACACATGTTTCATCTGCGTTGAAACGACGCGGTGAT
GGCGTTGTGGGGTTAGACAATTTCAATGATTATTATGATCCATCGTTGAAAAGAGCCCGG
CAAACTCTGTTAGAGAGTGCCGGGGTCTACATTGTAGAGGGTGACATCAATGATGTCGCC
CTCTTAAAGAAATTATTCGATATTGTGCAATTTAGTCATGTTATGCATTTGGCTGCACAA
GCTGGTGTTAGATATGCTATGGAAAATCCTAGCTCATATGTGCATAGTAACATTGCTGGT
TTAGTTAATCTTCTTGAATTTTGCAAAAATGCTAATCCTCAACCTGCTATTGTATGGGCA
TCATCAAGTTCTGTTTATGGATTGAATACTAAGGTTCCGTTTTCGGAGTCAGATAGAACA
GATCAACCAGCTAGTCTATATGCTGCAACTAAGAAAGCGGGCGAAGAAATTGCTCATACA
TATAATCATATATATGGTCTTTCACTTACTGGATTGCGATTTTTCACTGTTTATGGACCA
TGGGGCAGGCCAGATATGGCGTATTTCTTTTTCACGAGGGATATGTTGAAGGGGAAGTCT
ATATCGATCTTTGAGGGAGCGGATCATGGGACTGTTGCTAGGGACTTTACCTACATTGAT
GACATAGTAAAGGGTTGTTTGGGAGCGTTGGACACGGCTGAGAAGAGCACGGGAAGTGGT
GGGAAAAAGAAAGGTCCTGCTCAATTGCGCGTGTTCAATTTAGGAAACACTTCTCCTGTG
CCTGTTTCGGATCTTGTTACCATTTTGGAAAGGTTACTAAAGGTGAAAGCTAAACGAGCT
GTGATGAAGTTGCCAAGGAACGGTGATGTTCAGTTTACTCATGCTAATATAAGCTTAGCG
CAAAGGGAACTTGGATATAAGCCTACAACAGATTTACAGACAGGGCTTAAGAAATTCGTT
CGATGGTACCTTAGCTACTATGGTGAGGGAAAGAAGAGCGCGCAGTGA

Peptide Sequence

PEP ID

Solyc10g018260.1.1
PEP Infomation

UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** GAE4_ARATH)
Sequence

MSSMKHVDNIPSTPGKFKEKSHYNRLRLHFSVAKLTFWSFVFLGLIFICFFKSTSSSSSP
VSSDLSRRSLRTSSYDGPAWEKRIKASAKIRSTNGISVLVTGAAGFVGTHVSSALKRRGD
GVVGLDNFNDYYDPSLKRARQTLLESAGVYIVEGDINDVALLKKLFDIVQFSHVMHLAAQ
AGVRYAMENPSSYVHSNIAGLVNLLEFCKNANPQPAIVWASSSSVYGLNTKVPFSESDRT
DQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDMLKGKS
ISIFEGADHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAQLRVFNLGNTSPV
PVSDLVTILERLLKVKAKRAVMKLPRNGDVQFTHANISLAQRELGYKPTTDLQTGLKKFV
RWYLSYYGEGKKSAQ*

Transcript Sequence

Transcript ID

Solyc10g018260.1.1
Transcript Infomation

UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** GAE4_ARATH)
Sequence

ATGTCCTCAATGAAGCACGTTGACAATATTCCATCAACCCCAGGAAAGTTTAAGGAAAAA
TCCCATTATAATAGGCTTAGGCTTCATTTTTCTGTAGCCAAGCTTACATTTTGGTCATTT
GTGTTCTTGGGTTTGATCTTTATATGTTTTTTTAAATCAACATCTTCATCTTCATCCCCT
GTATCTTCAGATCTCTCAAGAAGATCTCTTAGAACAAGTTCTTATGATGGTCCAGCTTGG
GAGAAAAGGATTAAAGCCTCAGCAAAAATCAGGTCAACAAATGGTATTTCTGTTTTGGTT
ACTGGTGCTGCTGGTTTTGTAGGTACACATGTTTCATCTGCGTTGAAACGACGCGGTGAT
GGCGTTGTGGGGTTAGACAATTTCAATGATTATTATGATCCATCGTTGAAAAGAGCCCGG
CAAACTCTGTTAGAGAGTGCCGGGGTCTACATTGTAGAGGGTGACATCAATGATGTCGCC
CTCTTAAAGAAATTATTCGATATTGTGCAATTTAGTCATGTTATGCATTTGGCTGCACAA
GCTGGTGTTAGATATGCTATGGAAAATCCTAGCTCATATGTGCATAGTAACATTGCTGGT
TTAGTTAATCTTCTTGAATTTTGCAAAAATGCTAATCCTCAACCTGCTATTGTATGGGCA
TCATCAAGTTCTGTTTATGGATTGAATACTAAGGTTCCGTTTTCGGAGTCAGATAGAACA
GATCAACCAGCTAGTCTATATGCTGCAACTAAGAAAGCGGGCGAAGAAATTGCTCATACA
TATAATCATATATATGGTCTTTCACTTACTGGATTGCGATTTTTCACTGTTTATGGACCA
TGGGGCAGGCCAGATATGGCGTATTTCTTTTTCACGAGGGATATGTTGAAGGGGAAGTCT
ATATCGATCTTTGAGGGAGCGGATCATGGGACTGTTGCTAGGGACTTTACCTACATTGAT
GACATAGTAAAGGGTTGTTTGGGAGCGTTGGACACGGCTGAGAAGAGCACGGGAAGTGGT
GGGAAAAAGAAAGGTCCTGCTCAATTGCGCGTGTTCAATTTAGGAAACACTTCTCCTGTG
CCTGTTTCGGATCTTGTTACCATTTTGGAAAGGTTACTAAAGGTGAAAGCTAAACGAGCT
GTGATGAAGTTGCCAAGGAACGGTGATGTTCAGTTTACTCATGCTAATATAAGCTTAGCG
CAAAGGGAACTTGGATATAAGCCTACAACAGATTTACAGACAGGGCTTAAGAAATTCGTT
CGATGGTACCTTAGCTACTATGGTGAGGGAAAGAAGAGCGCGCAGTGA