Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g017880.2.1
CDS Infomation

F-box protein (AHRD V3.3 *** A0A0B2RBZ5_GLYSO)
Sequence

ATGGAGTCTCGGGCTGATTTTGTACAATGTCTTGGAAGTGACATGTCAATTAATATTCTG
GCATGTTTGAATGAGCCAGTAGATGTGGTCCGTGCAGGCTCCGTCTCAAGACTTTGGCAC
CATTTTGTGATTACGAATGGGATTTCCAAGAAACTATGTCTGAAAAGGTTTCCTCAGCTT
TCTGGGATTGCACGTATAACTGAACCAGATTGGATAACAACAGAAGCAAATGGTGCTGGA
TCCAACAATTCCAGTTGGGATATTCTGAAGAGAGACCACAATGTTTATGCTTCTCTCCTT
CATGCTATTACAACATTAAACACATGTCAGTGTGAATGCATAGCATATGCAGTTAGTGCT
TCTAGTACAGATAGATTTCCTGCCGAAAGTGTTGCCAATACTTTAACAACTAGGAGATAT
CTTGGTGGACATTCATACTGGTCAAGTAAAGGACATGCTGATCCAGATTCCCCCGAGACA
TTAATTTACAAATTGAAAGCCGATCTGTGTGTTATTAGTGAAATTAGTGTACAACCTTTT
GAAGCTTTTTACCAGCCCGGCCAGCCTATATACTCTGCAAAATCTGTTCGATTTCGGTTA
GGACACCCCAAAAATTCACTAGACGAAAATGATGTCCTGCAAATGCCTCAGCAACAGGCT
GCTGATGACAAGTTTATATGGACGTATACATCAGAAGTATACCCTATGGAACAGAAAAAC
TGCTTGCAGCAGTACAAGCTACCAGAACCAGTGCTTTGCATTGGTGGATATCTGCAGATT
GAACTGCTGGGTAGAGTTCAGAGGCAACATTCAGACAACTTGTTTTACACATGCGTTAGC
CATGTGAAAGTCATGGGTGGTGGTCCTCTGTGCCCTGCATTTGACATAGATATCCTCGAA
CCATCAGGGAAGTTTGCGTTGAAGTACACCCCAGGGGTTCTCCGATGGATGTTGCCAAGC
TTTTCAGAAAACTCAAATATGTCTCCAATGCCAGCAGAGGAAGAAGCGGTTGAAAATGTA
GGTGTTATGGGGTTTCTGTTACAGGCTTACCATGGGGGTATTGAACCGATGGTATGGGAT
GAACCCATGGAATGGGATGACAACGATGAAGAAATGGATGAACTTGGTGTACTTTAG

Peptide Sequence

PEP ID

Solyc10g017880.2.1
PEP Infomation

F-box protein (AHRD V3.3 *** A0A0B2RBZ5_GLYSO)
Sequence

MESRADFVQCLGSDMSINILACLNEPVDVVRAGSVSRLWHHFVITNGISKKLCLKRFPQL
SGIARITEPDWITTEANGAGSNNSSWDILKRDHNVYASLLHAITTLNTCQCECIAYAVSA
SSTDRFPAESVANTLTTRRYLGGHSYWSSKGHADPDSPETLIYKLKADLCVISEISVQPF
EAFYQPGQPIYSAKSVRFRLGHPKNSLDENDVLQMPQQQAADDKFIWTYTSEVYPMEQKN
CLQQYKLPEPVLCIGGYLQIELLGRVQRQHSDNLFYTCVSHVKVMGGGPLCPAFDIDILE
PSGKFALKYTPGVLRWMLPSFSENSNMSPMPAEEEAVENVGVMGFLLQAYHGGIEPMVWD
EPMEWDDNDEEMDELGVL*

Transcript Sequence

Transcript ID

Solyc10g017880.2.1
Transcript Infomation

F-box protein (AHRD V3.3 *** A0A0B2RBZ5_GLYSO)
Sequence

TCCCCCCGGTAATAACATATATTTAGTTAGGTAGTTTTTCCATGTAAATTTCCCGCAAAC
TTTTGGACCGGTAAGGCCCAATTCCTTTTAAGCCCCCATCTCGATCGTATAGAACAAAAA
ACGACATGATTTCATGTACTTGAGAACCCTTTTTCAGTTTTCTTCTTCACCGATTTCCAG
GTTTTGGAGCTTGACGTCGATTGGATTGACTTTTATAGTGGCTGGTCAATCAGAATGGAG
TCTCGGGCTGATTTTGTACAATGTCTTGGAAGTGACATGTCAATTAATATTCTGGCATGT
TTGAATGAGCCAGTAGATGTGGTCCGTGCAGGCTCCGTCTCAAGACTTTGGCACCATTTT
GTGATTACGAATGGGATTTCCAAGAAACTATGTCTGAAAAGGTTTCCTCAGCTTTCTGGG
ATTGCACGTATAACTGAACCAGATTGGATAACAACAGAAGCAAATGGTGCTGGATCCAAC
AATTCCAGTTGGGATATTCTGAAGAGAGACCACAATGTTTATGCTTCTCTCCTTCATGCT
ATTACAACATTAAACACATGTCAGTGTGAATGCATAGCATATGCAGTTAGTGCTTCTAGT
ACAGATAGATTTCCTGCCGAAAGTGTTGCCAATACTTTAACAACTAGGAGATATCTTGGT
GGACATTCATACTGGTCAAGTAAAGGACATGCTGATCCAGATTCCCCCGAGACATTAATT
TACAAATTGAAAGCCGATCTGTGTGTTATTAGTGAAATTAGTGTACAACCTTTTGAAGCT
TTTTACCAGCCCGGCCAGCCTATATACTCTGCAAAATCTGTTCGATTTCGGTTAGGACAC
CCCAAAAATTCACTAGACGAAAATGATGTCCTGCAAATGCCTCAGCAACAGGCTGCTGAT
GACAAGTTTATATGGACGTATACATCAGAAGTATACCCTATGGAACAGAAAAACTGCTTG
CAGCAGTACAAGCTACCAGAACCAGTGCTTTGCATTGGTGGATATCTGCAGATTGAACTG
CTGGGTAGAGTTCAGAGGCAACATTCAGACAACTTGTTTTACACATGCGTTAGCCATGTG
AAAGTCATGGGTGGTGGTCCTCTGTGCCCTGCATTTGACATAGATATCCTCGAACCATCA
GGGAAGTTTGCGTTGAAGTACACCCCAGGGGTTCTCCGATGGATGTTGCCAAGCTTTTCA
GAAAACTCAAATATGTCTCCAATGCCAGCAGAGGAAGAAGCGGTTGAAAATGTAGGTGTT
ATGGGGTTTCTGTTACAGGCTTACCATGGGGGTATTGAACCGATGGTATGGGATGAACCC
ATGGAATGGGATGACAACGATGAAGAAATGGATGAACTTGGTGTACTTTAGTAGTATGAA
CTTGGATGATAATCTCTTGTATTTAGTTTTAAAATTTCCACCAAATAACTGTCAAATTTG
TGTCCTTGAGTTGTTTGGCTTTGCAATTTGCTTGTCCTAGTTTTCTTCTTATATATGAGG
CTTGCTTACATGCAAATAAGCAATTAATTCAGTCACAAAAAAGGTGCACCATCTCTATTG
TAGGTTGGTACCTCCAAACCAACCATTTTTTTTAACCTATTTAAAAAACATAGGGGAATG
CATGTTTGGATGGTGATATTCCCTGTGAGATAATACACACATATTAAGAAAATCATTCAA
GAACATATTGTTTTTTGTGAAATTATAAATC