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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g012253.1.1
CDS Infomation

Rhomboid-like protein (AHRD V3.3 *** K4CM51_SOLLC)
Sequence

ATGACCATGGCGATGCTGCTATCTACACCTCCACTAATCCCTCTTCCAACACTTGCCCTT
AAACTCAAAACTTCACTTATTACTCCAATTTCCTCAACTCGTCTTCTCTGTAAATTCAAT
GATTTTGATATGACATCACAGCTGGAAATTCTAAAGCCTGAACGGAAGAAGCCAGACAAG
GGTGTCAATGGGATTTTCTGGATTCTACTTCTTAACCTGGGAATATATGTAGCAGATCAT
GTTTTCCAGATTCGGGTAGTAAGAGCATTATACTTATACCACAATCGGCCTACTTGGTAC
CAGTTTGTGACTGCAACATTCTGTCATTTTAACTGGAACCACCTATCTAGCAATCTTTTC
TTTCTAAAACTCGTTGAAGAGGAGAAAGGAAACTTTAAATTGTGGCTTTCTTATATATTA
ACTGGGGCTGGAGCTAACCTTGTCTCATGGTTGATTCTTCCGAGAAATGTTGTTTCTGTT
GGTGCATCTGCTGTATTGTTTGGACTCTTTGCTATTAGTGTACTTGTGAAGATGTCTTGG
GATTGGAGAAAGATTCTTGAAGAACTTATATTGGGA

Peptide Sequence

PEP ID

Solyc10g012253.1.1
PEP Infomation

Rhomboid-like protein (AHRD V3.3 *** K4CM51_SOLLC)
Sequence

MTMAMLLSTPPLIPLPTLALKLKTSLITPISSTRLLCKFNDFDMTSQLEILKPERKKPDK
GVNGIFWILLLNLGIYVADHVFQIRVVRALYLYHNRPTWYQFVTATFCHFNWNHLSSNLF
FLKLVEEEKGNFKLWLSYILTGAGANLVSWLILPRNVVSVGASAVLFGLFAISVLVKMSW
DWRKILEELILG

Transcript Sequence

Transcript ID

Solyc10g012253.1.1
Transcript Infomation

Rhomboid-like protein (AHRD V3.3 *** K4CM51_SOLLC)
Sequence

AGGAGATATGAAAAACCGATAAGCTGTGCCTCTACATTCTTGATTTTCCGGTGATGAAAC
AGCTTGAGTATCAGCACCATCTGGGCCTTAACACAATGTTTTCATGACCATGGCGATGCT
GCTATCTACACCTCCACTAATCCCTCTTCCAACACTTGCCCTTAAACTCAAAACTTCACT
TATTACTCCAATTTCCTCAACTCGTCTTCTCTGTAAATTCAATGATTTTGATATGACATC
ACAGCTGGAAATTCTAAAGCCTGAACGGAAGAAGCCAGACAAGGGTGTCAATGGGATTTT
CTGGATTCTACTTCTTAACCTGGGAATATATGTAGCAGATCATGTTTTCCAGATTCGGGT
AGTAAGAGCATTATACTTATACCACAATCGGCCTACTTGGTACCAGTTTGTGACTGCAAC
ATTCTGTCATTTTAACTGGAACCACCTATCTAGCAATCTTTTCTTTCTAAAACTCGTTGA
AGAGGAGAAAGGAAACTTTAAATTGTGGCTTTCTTATATATTAACTGGGGCTGGAGCTAA
CCTTGTCTCATGGTTGATTCTTCCGAGAAATGTTGTTTCTGTTGGTGCATCTGCTGTATT
GTTTGGACTCTTTGCTATTAGTGTACTTGTGAAGATGTCTTGGGATTGGAGAAAGATTCT
TGAAGAACTTATATTGGGA