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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g011880.1.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT3G61550.1)
Sequence

ATGTCCACCATTCCCTCCGCCGCCTACGGCGGTCCACCACCACCTCTAACCACCACCAAT
ACGCTCATCGAGAGCCTCAACAAAATAGGCCTCGGCTACGCAATTGCAATTGCCCTTGCC
TTCCTCTTCCTCCTATCAACTCTCATCCTTTCATCTTACCTATGCTGCCGCTCCGCTGCC
TATCGCCGCCGTCAAGCCCAATCCCAGTCTCGAAACCCGAACACCGGAATTTACATTCCG
AGTGTAATTTTCGTTGCTGAGGAAGACGAAAACGACGACGTTTCATCTCAGAACACTTTC
GCGGGCCTCAATCAAGCAGTAATCAACTCTTACCCTAAATTAATTTACTCAAGCAGAAAC
GGAAATTGGGGAAACGGAAACGGAAGCAGAAACGACGTCGTGTGTGCGATTTGTTTGTGC
GATTACAAGGAAGCGGAGATGTTACGGATGTTACCTGAGTGTAAGCATTATTTTCATGTG
ATGTGCGTAGATGCGTGGCTGAAATTGAATGCTTCATGTCCAGTCTGCCGGAACTCGCCG
TTGCCGACGCCGATGTCCACGCCGTTGTCGGAGGTGGTCCCACTTTCACAATATTCCGAT
GGTCGGAGAAGACATTGA

Peptide Sequence

PEP ID

Solyc10g011880.1.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT3G61550.1)
Sequence

MSTIPSAAYGGPPPPLTTTNTLIESLNKIGLGYAIAIALAFLFLLSTLILSSYLCCRSAA
YRRRQAQSQSRNPNTGIYIPSVIFVAEEDENDDVSSQNTFAGLNQAVINSYPKLIYSSRN
GNWGNGNGSRNDVVCAICLCDYKEAEMLRMLPECKHYFHVMCVDAWLKLNASCPVCRNSP
LPTPMSTPLSEVVPLSQYSDGRRRH*

Transcript Sequence

Transcript ID

Solyc10g011880.1.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT3G61550.1)
Sequence

ATGTCCACCATTCCCTCCGCCGCCTACGGCGGTCCACCACCACCTCTAACCACCACCAAT
ACGCTCATCGAGAGCCTCAACAAAATAGGCCTCGGCTACGCAATTGCAATTGCCCTTGCC
TTCCTCTTCCTCCTATCAACTCTCATCCTTTCATCTTACCTATGCTGCCGCTCCGCTGCC
TATCGCCGCCGTCAAGCCCAATCCCAGTCTCGAAACCCGAACACCGGAATTTACATTCCG
AGTGTAATTTTCGTTGCTGAGGAAGACGAAAACGACGACGTTTCATCTCAGAACACTTTC
GCGGGCCTCAATCAAGCAGTAATCAACTCTTACCCTAAATTAATTTACTCAAGCAGAAAC
GGAAATTGGGGAAACGGAAACGGAAGCAGAAACGACGTCGTGTGTGCGATTTGTTTGTGC
GATTACAAGGAAGCGGAGATGTTACGGATGTTACCTGAGTGTAAGCATTATTTTCATGTG
ATGTGCGTAGATGCGTGGCTGAAATTGAATGCTTCATGTCCAGTCTGCCGGAACTCGCCG
TTGCCGACGCCGATGTCCACGCCGTTGTCGGAGGTGGTCCCACTTTCACAATATTCCGAT
GGTCGGAGAAGACATTGA