Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g011790.3.1
CDS Infomation	BTB/POZ domain-containing family protein (AHRD V3.3 *** B9I8T4_POPTR)
Sequence	ATGAAGGATCAGAATTTGGACCTATTCGACCCGAGAACGGCGGTCATGGACCCGGAATAC TCCCCTACTCATACCGGGGAACCCGATTTCGCCTTTGCCTTCGACGACGTCAACTTCTCC GATCGTATTCTACGGATCGAGATCCTTGGAGATTCAATTGCCGGTGGTTCTAGTTCCGAC GGCGGCTGCAGTAGCTTAGCCGATTGGGCTCGTAATCGCAAGCGCCGACGTGAGGATTTC AGGAAGGAAAACGCTTTGGATATCACAGCATGCCCTGAAGATCAGATAATTTGCTGTAAT CAAATTGATAGTGAAGATGCTGATAACGAGAATCAGGATGAAGCAGTTGTTGCAATGATT GAAGAGACAAACTCAGGAGATGAAGCTGCTAATAGTGATGATTCAACTTGGAATTGTGAT TCTCCAAGGGTTATGAGAGTTAAAACACTAAACATTAGCTCCCCCATTTTAGCAGCAAAG AGTCCATTCTTCTACAAGCTCTTCTCAAATGGGATGAGAGAGTCTGAGCAAAGACAAGTA ACTCTACGGATCAATGCTTCAGAGGAAGCTGCATTGACGGAGCTCCTGAAATTTATGTAT AGAAATATGTTGACTACAAATACAGCGCCTGGGTTGCTTGACGTGCTCATGGCTGCTGAC AAGTTTGAGGTTGCATCTTGCATGAAGTATTGCAGCAGGCTACTGTGTAATTTGCCTATG ACTCCGGAGTCAGCCTTGCTGTATCTGGAGCTTCCTTCTAGTGTCCTGATGGCTGATGCA GTTCGGCCATTGACTGATGCAGCAAAACAATTCCTAGCTGCAAGATACAAAGATATAACC AAATTCCAAGAAGAGGTCATGAAATTGCCTCTTGCTGGTATTGAGGCAATTTTGTCCAGT GATGACCTTCAGGTAGCATCAGAAGATGCAGTATATGACTTTGTCTTGAAATGGACAAGG GCTCATTATCCCTTGATAGAGGAACGCCGAGAAATTCTTAGTTCAAGACTTGGTCGCTGC ATCCGGTTTCCTTTCATGAGCTGCCGGAAACTTAGGAAGGTTCTTACATGTAATGACTTT GAACATGAGTTTGCATCCAAACTAGTGCTTGAGGCCCTGTTTTTTAAAGCTGAGGCCCCA CACCGCCAACGAACTCAAGCTGCAGAAGAATCAGCTTCGACCAGTCGTCGTTTTGTAGAG CGTGCATACAAGTATCGGCCTGTTAAGGTGGTTGAGTTTGAACTTCCACGCCAACAATGT ATAGTCTACTTAGATCTTAAGCGGGAAGAATGTGCTAATCTTTTTCCATCTGGGAGAGTA TATTCTCAAGCTTTTCATTTGGGTGGACAAGGGTTTTTCCTGTCCGCACATTGCAACATG GATCAGCAAAGCTCTTTCCATTGTTTTGGTCTCTTTTTGGGAATGCAGGAAAAGGGTTCA GTTTCATTTACAGTCGATTATGAATTTGCTGCGAGGACAACACTAGCAGAGGAGTATGTC AGCAAATACAAGGGAAACTATACATTTACTGGGGGTAAGGCAGTTGGCTATCGCAATTTA TTCGCCATACCGTGGACTTCTTTCATGGCTGAGGACAGTCTCTATTTTATTAAAGGCGTA CTCCATCTCAGGGCTGAACTTACTATCAGGCCCTGA

Peptide Sequence

PEP ID	Solyc10g011790.3.1
PEP Infomation	BTB/POZ domain-containing family protein (AHRD V3.3 *** B9I8T4_POPTR)
Sequence	MKDQNLDLFDPRTAVMDPEYSPTHTGEPDFAFAFDDVNFSDRILRIEILGDSIAGGSSSD GGCSSLADWARNRKRRREDFRKENALDITACPEDQIICCNQIDSEDADNENQDEAVVAMI EETNSGDEAANSDDSTWNCDSPRVMRVKTLNISSPILAAKSPFFYKLFSNGMRESEQRQV TLRINASEEAALTELLKFMYRNMLTTNTAPGLLDVLMAADKFEVASCMKYCSRLLCNLPM TPESALLYLELPSSVLMADAVRPLTDAAKQFLAARYKDITKFQEEVMKLPLAGIEAILSS DDLQVASEDAVYDFVLKWTRAHYPLIEERREILSSRLGRCIRFPFMSCRKLRKVLTCNDF EHEFASKLVLEALFFKAEAPHRQRTQAAEESASTSRRFVERAYKYRPVKVVEFELPRQQC IVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGS VSFTVDYEFAARTTLAEEYVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAEDSLYFIKGV LHLRAELTIRP*

Transcript Sequence

Transcript ID	Solyc10g011790.3.1
Transcript Infomation	BTB/POZ domain-containing family protein (AHRD V3.3 *** B9I8T4_POPTR)
Sequence	CAATGTTATTTTTTTTGAAAATTTTCAACAAAAAAGGGGAAAAAAACCTTTTTGCTTTAT ATTCCTCTTTCCTTCATGATATAATTATGAACCCACCCATTACATGTATATACTCAAAAA AATTTTACTATTTTTGCTCTTTCTCTCTCTTCTTTTATTAATTTTTTCTTCTCTCACTAG TTTTAAATTCATCTTCAACGACTCGAATCCATATGTCTTATCTCCAAACGCCATAACTCT GAATTCTCCCAAAAACCAAACAAAGCTTTTAGGGTTTTCGTAGAAAGGATATGAAGGATC AGAATTTGGACCTATTCGACCCGAGAACGGCGGTCATGGACCCGGAATACTCCCCTACTC ATACCGGGGAACCCGATTTCGCCTTTGCCTTCGACGACGTCAACTTCTCCGATCGTATTC TACGGATCGAGATCCTTGGAGATTCAATTGCCGGTGGTTCTAGTTCCGACGGCGGCTGCA GTAGCTTAGCCGATTGGGCTCGTAATCGCAAGCGCCGACGTGAGGATTTCAGGAAGGAAA ACGCTTTGGATATCACAGCATGCCCTGAAGATCAGATAATTTGCTGTAATCAAATTGATA GTGAAGATGCTGATAACGAGAATCAGGATGAAGCAGTTGTTGCAATGATTGAAGAGACAA ACTCAGGAGATGAAGCTGCTAATAGTGATGATTCAACTTGGAATTGTGATTCTCCAAGGG TTATGAGAGTTAAAACACTAAACATTAGCTCCCCCATTTTAGCAGCAAAGAGTCCATTCT TCTACAAGCTCTTCTCAAATGGGATGAGAGAGTCTGAGCAAAGACAAGTAACTCTACGGA TCAATGCTTCAGAGGAAGCTGCATTGACGGAGCTCCTGAAATTTATGTATAGAAATATGT TGACTACAAATACAGCGCCTGGGTTGCTTGACGTGCTCATGGCTGCTGACAAGTTTGAGG TTGCATCTTGCATGAAGTATTGCAGCAGGCTACTGTGTAATTTGCCTATGACTCCGGAGT CAGCCTTGCTGTATCTGGAGCTTCCTTCTAGTGTCCTGATGGCTGATGCAGTTCGGCCAT TGACTGATGCAGCAAAACAATTCCTAGCTGCAAGATACAAAGATATAACCAAATTCCAAG AAGAGGTCATGAAATTGCCTCTTGCTGGTATTGAGGCAATTTTGTCCAGTGATGACCTTC AGGTAGCATCAGAAGATGCAGTATATGACTTTGTCTTGAAATGGACAAGGGCTCATTATC CCTTGATAGAGGAACGCCGAGAAATTCTTAGTTCAAGACTTGGTCGCTGCATCCGGTTTC CTTTCATGAGCTGCCGGAAACTTAGGAAGGTTCTTACATGTAATGACTTTGAACATGAGT TTGCATCCAAACTAGTGCTTGAGGCCCTGTTTTTTAAAGCTGAGGCCCCACACCGCCAAC GAACTCAAGCTGCAGAAGAATCAGCTTCGACCAGTCGTCGTTTTGTAGAGCGTGCATACA AGTATCGGCCTGTTAAGGTGGTTGAGTTTGAACTTCCACGCCAACAATGTATAGTCTACT TAGATCTTAAGCGGGAAGAATGTGCTAATCTTTTTCCATCTGGGAGAGTATATTCTCAAG CTTTTCATTTGGGTGGACAAGGGTTTTTCCTGTCCGCACATTGCAACATGGATCAGCAAA GCTCTTTCCATTGTTTTGGTCTCTTTTTGGGAATGCAGGAAAAGGGTTCAGTTTCATTTA CAGTCGATTATGAATTTGCTGCGAGGACAACACTAGCAGAGGAGTATGTCAGCAAATACA AGGGAAACTATACATTTACTGGGGGTAAGGCAGTTGGCTATCGCAATTTATTCGCCATAC CGTGGACTTCTTTCATGGCTGAGGACAGTCTCTATTTTATTAAAGGCGTACTCCATCTCA GGGCTGAACTTACTATCAGGCCCTGATTTTTCTCTCCTACGATTTCAATTACTACTGTTG TTTTGCTTATTAGCTGAGCCTCCCGATTCCCGATCTTTTTTCTTGGCTTTTGATCAAGCA AAAAGAAGTGTAACGTGTAGGTGTCGGTACTAACTGCTGTAGGTATTAAAACGTTTCGTA ATGTTATCCTTTTGACCATAGTAGCTTTATCCCTGTGCTCTTTAAAACATGAGAAAGGAT GTAAATGGAATTCAGTGAGTGAGAAATGTTTGATTGTTCTGACCCTGTTTTAATGCAATA CAAGGCACAGAGGTGAACATTGTGAATAGGTTATTTGATTTTTAACTTTCTTATGCCCTG TTATGTCATAGACAGGTATATAATTTATATCTGGCTCTGTGTGTGTGTATCAAAATCCCT TCTACTGATTTAACAATGTTCTTTCTTAGTAATGTTCATGAGGTGAAGCTACTAATTGAA TGGTAAACATTGGGT