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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g011750.3.1
CDS Infomation

LOW QUALITY:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** AT2G46300.1)
Sequence

ATGTCACAGATGCAACCATTAAAGAAGCCACCAGGGTTTAAAGATCCTACAATTCCAATC
CAAATGCCACCAAGAAAAGTTCAACTTCCACCTTCATTCAATCCACAAAAGGAAAGAAGT
AATTGTTGTTGTAGATGTTTTTGTTGTTGCTTTTTGATTATACTAATCTTGTTACTCTTA
TTAGTATCTGCTTGTGGTGTTTTTTACCTTTGGTTTGATCCAAAAGCCCCTGTTTTCCAT
TTAAGATCTCTTGAGTTTACTAAATTTAATGTTACTGAAAGTCAGGATGGGCAAAGATTG
AATGCACAATCAGTACTTGGGGTGGAGTTGAAAAACCCAAATGGGGAGCTGAAGATTGTG
TATGGTGATACTAAAGTGGATTTAAAAGGCGAAAACGACGTAAACATGGGTGCAGGGGAA
GTTGTTGGTTTTGTTCTGGAGAATAGGAAGGTTAAAGTTGTTAAATTCGTTATGAAATCG
AATGAGTTGTTGTATGATGAAAGTAGTGGGAAATTGATTGTGGATGAATTCAAGAACAAG
AATTTGAGAGTTTCTGCTGATGTGAGTACTGATATTGGTGTTGGATATAAAGGATGGAAG
AGTTGGAATATTAGAGTTAAGGTTTCTTGTGGATCTTTGAGGTTAAAGCAGATTGAAAAT
GGTGCTACACCAAAATGTGGCATTACCTTGTTTAACTGG

Peptide Sequence

PEP ID

Solyc10g011750.3.1
PEP Infomation

LOW QUALITY:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** AT2G46300.1)
Sequence

MSQMQPLKKPPGFKDPTIPIQMPPRKVQLPPSFNPQKERSNCCCRCFCCCFLIILILLLL
LVSACGVFYLWFDPKAPVFHLRSLEFTKFNVTESQDGQRLNAQSVLGVELKNPNGELKIV
YGDTKVDLKGENDVNMGAGEVVGFVLENRKVKVVKFVMKSNELLYDESSGKLIVDEFKNK
NLRVSADVSTDIGVGYKGWKSWNIRVKVSCGSLRLKQIENGATPKCGITLFNW

Transcript Sequence

Transcript ID

Solyc10g011750.3.1
Transcript Infomation

LOW QUALITY:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** AT2G46300.1)
Sequence

CCCCAAAATCCTTTCTTTAATTCCTAAAATCATATAATCTTGATCTTGATTTTGATTCTT
CATATTCATCAAGATTCAAACTTTACCCTTTTATGCACATAACCTGTTTGATTTAATGCA
ACATTTCACTTTTCATAATTCATAAAGATTTACTCATTTATATAAAGAATCCAGAAAAGG
GAAAAAAGGGATTTTTTTTTGGTTTAGATTCAAGAATGTCACAGATGCAACCATTAAAGA
AGCCACCAGGGTTTAAAGATCCTACAATTCCAATCCAAATGCCACCAAGAAAAGTTCAAC
TTCCACCTTCATTCAATCCACAAAAGGAAAGAAGTAATTGTTGTTGTAGATGTTTTTGTT
GTTGCTTTTTGATTATACTAATCTTGTTACTCTTATTAGTATCTGCTTGTGGTGTTTTTT
ACCTTTGGTTTGATCCAAAAGCCCCTGTTTTCCATTTAAGATCTCTTGAGTTTACTAAAT
TTAATGTTACTGAAAGTCAGGATGGGCAAAGATTGAATGCACAATCAGTACTTGGGGTGG
AGTTGAAAAACCCAAATGGGGAGCTGAAGATTGTGTATGGTGATACTAAAGTGGATTTAA
AAGGCGAAAACGACGTAAACATGGGTGCAGGGGAAGTTGTTGGTTTTGTTCTGGAGAATA
GGAAGGTTAAAGTTGTTAAATTCGTTATGAAATCGAATGAGTTGTTGTATGATGAAAGTA
GTGGGAAATTGATTGTGGATGAATTCAAGAACAAGAATTTGAGAGTTTCTGCTGATGTGA
GTACTGATATTGGTGTTGGATATAAAGGATGGAAGAGTTGGAATATTAGAGTTAAGGTTT
CTTGTGGATCTTTGAGGTTAAAGCAGATTGAAAATGGTGCTACACCAAAATGTGGCATTA
CCTTGTTTAACTGG