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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g009600.1.1
CDS Infomation

Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4)
Sequence

ATGGTAGAACTGATGTTGAGACTTTCAAAGCTTGTGTCCCCATTGTCAGTCATAGTGATT
TGGAACCTTACATTCAAAGAATTGTTGATGGTGATCTTTCCACCTATTCTTACGGGAAAG
CCCATTCAAGCGATCTCCTTGAGTTCTGGTACTACTCAAGGGAAGCCAAAGTTTGTACCT
TTCAATGATGAATTGATGGATTCCACCATGCAGATATTCAAGACTTCTTTTGCCTTTAGG
AACAGAGAATTTCCAATTGGGAATGGGAAGGCATTGCAGATTAAAACTAAAGGTGGTTTG
GCAGTTGGAACAGCCACTACCAATGTGTATAAAAATGCACAATTCAAGAAGACAATGAAG
GCAATGTCTACCCCAGTTTGTAGTCCTGATGAAGTGATATTTGGTCCTGATTTTCAACAA
TCTTTATACTGTCACCTTCTGTCTGGTCTCATTTTCCGCGATGAAGTTCAAGTTGTTTGG
TCTGCATTTGCACATAGCATTGTCCAAGCTTTTCGAACTTTCGAACAAGTATGGGAAGAA
CTTGTTATTGACATAAGGGATGGAGTCTTATCAAGCCGAGTCACTGTCCCGTCCATAAGA
TTGGCCATGTCGAAATTGCTAAAGCCTGATCCAGAGCTGGCTGATACAATTTATAGCAAA
TGCTCAAGTTTAAACAATTGGTTTGGCTTGATTCCTGAACTCTTCCCGAATACAAAGTAC
ATTTATGGTATCATGACAGGTTCCATGGAGCCTTACTTGAAGAAACTGAGGCACTATGCA
GGAGAATTACCTCTGGTGAGTGCAGATTATGGTTCTTCTGAAGGATGGATTGGAGTAAAC
GTTAACCCGATATTCCCCCCTGAGATGGAAAATCTCATTGGCATGGAGCAAGCAAATTCA
CCTGTCGGCCTGACTGAAGCTAAACTTGGTGAAGAGTATGAAATTATCTTAACCAATTTC
GCAGGTTTATATCGTTATAAACTAGGTGATGTTGTCAAGATAAAAGGATTCCACAATGTC
ACTCCAGAGATCCAGTTTGTCTGTCGAAGGAACCTTGTGTTGAGCATTAACATAGACAAG
AACACTGAGAAAGATTTGCAACTAGCTGTGAAAGCTGCAGGCAAGCACTTAGTTGACGAA
AAACTAGAAGTGGTGGACTTCACCAGCCATGCCAACATCTCATCTGATCCAGGGCACTAT
GTCATCTTCTGGGAACTGAGTGGGGAAGCAACTGATGAAATATTGCAAGAGTGCTGCAAG
TGTCTGGACAAATCGTTCCTCGATTCAGGCTATATGAATAACAAGAAAATGAATACAATT
GGAGCACTTGAGCTGAAGATTGTGAAGTGGGGAACCTTTCGTAAGATATTGGATCATTTC
GTTGGATTAGGAGGAGCGGTGAGCCAGTTCAAAACCCCTAGATGTGTTGGTCCTAAAAAC
AGCTCATTGATCCAGATACTATATAGTAATGTTGTTAAGAGCTATTCCAGTACTGCTTTC
TTTTAA

Peptide Sequence

PEP ID

Solyc10g009600.1.1
PEP Infomation

Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4)
Sequence

MVELMLRLSKLVSPLSVIVIWNLTFKELLMVIFPPILTGKPIQAISLSSGTTQGKPKFVP
FNDELMDSTMQIFKTSFAFRNREFPIGNGKALQIKTKGGLAVGTATTNVYKNAQFKKTMK
AMSTPVCSPDEVIFGPDFQQSLYCHLLSGLIFRDEVQVVWSAFAHSIVQAFRTFEQVWEE
LVIDIRDGVLSSRVTVPSIRLAMSKLLKPDPELADTIYSKCSSLNNWFGLIPELFPNTKY
IYGIMTGSMEPYLKKLRHYAGELPLVSADYGSSEGWIGVNVNPIFPPEMENLIGMEQANS
PVGLTEAKLGEEYEIILTNFAGLYRYKLGDVVKIKGFHNVTPEIQFVCRRNLVLSINIDK
NTEKDLQLAVKAAGKHLVDEKLEVVDFTSHANISSDPGHYVIFWELSGEATDEILQECCK
CLDKSFLDSGYMNNKKMNTIGALELKIVKWGTFRKILDHFVGLGGAVSQFKTPRCVGPKN
SSLIQILYSNVVKSYSSTAFF*

Transcript Sequence

Transcript ID

Solyc10g009600.1.1
Transcript Infomation

Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4)
Sequence

ATGGTAGAACTGATGTTGAGACTTTCAAAGCTTGTGTCCCCATTGTCAGTCATAGTGATT
TGGAACCTTACATTCAAAGAATTGTTGATGGTGATCTTTCCACCTATTCTTACGGGAAAG
CCCATTCAAGCGATCTCCTTGAGTTCTGGTACTACTCAAGGGAAGCCAAAGTTTGTACCT
TTCAATGATGAATTGATGGATTCCACCATGCAGATATTCAAGACTTCTTTTGCCTTTAGG
AACAGAGAATTTCCAATTGGGAATGGGAAGGCATTGCAGATTAAAACTAAAGGTGGTTTG
GCAGTTGGAACAGCCACTACCAATGTGTATAAAAATGCACAATTCAAGAAGACAATGAAG
GCAATGTCTACCCCAGTTTGTAGTCCTGATGAAGTGATATTTGGTCCTGATTTTCAACAA
TCTTTATACTGTCACCTTCTGTCTGGTCTCATTTTCCGCGATGAAGTTCAAGTTGTTTGG
TCTGCATTTGCACATAGCATTGTCCAAGCTTTTCGAACTTTCGAACAAGTATGGGAAGAA
CTTGTTATTGACATAAGGGATGGAGTCTTATCAAGCCGAGTCACTGTCCCGTCCATAAGA
TTGGCCATGTCGAAATTGCTAAAGCCTGATCCAGAGCTGGCTGATACAATTTATAGCAAA
TGCTCAAGTTTAAACAATTGGTTTGGCTTGATTCCTGAACTCTTCCCGAATACAAAGTAC
ATTTATGGTATCATGACAGGTTCCATGGAGCCTTACTTGAAGAAACTGAGGCACTATGCA
GGAGAATTACCTCTGGTGAGTGCAGATTATGGTTCTTCTGAAGGATGGATTGGAGTAAAC
GTTAACCCGATATTCCCCCCTGAGATGGAAAATCTCATTGGCATGGAGCAAGCAAATTCA
CCTGTCGGCCTGACTGAAGCTAAACTTGGTGAAGAGTATGAAATTATCTTAACCAATTTC
GCAGGTTTATATCGTTATAAACTAGGTGATGTTGTCAAGATAAAAGGATTCCACAATGTC
ACTCCAGAGATCCAGTTTGTCTGTCGAAGGAACCTTGTGTTGAGCATTAACATAGACAAG
AACACTGAGAAAGATTTGCAACTAGCTGTGAAAGCTGCAGGCAAGCACTTAGTTGACGAA
AAACTAGAAGTGGTGGACTTCACCAGCCATGCCAACATCTCATCTGATCCAGGGCACTAT
GTCATCTTCTGGGAACTGAGTGGGGAAGCAACTGATGAAATATTGCAAGAGTGCTGCAAG
TGTCTGGACAAATCGTTCCTCGATTCAGGCTATATGAATAACAAGAAAATGAATACAATT
GGAGCACTTGAGCTGAAGATTGTGAAGTGGGGAACCTTTCGTAAGATATTGGATCATTTC
GTTGGATTAGGAGGAGCGGTGAGCCAGTTCAAAACCCCTAGATGTGTTGGTCCTAAAAAC
AGCTCATTGATCCAGATACTATATAGTAATGTTGTTAAGAGCTATTCCAGTACTGCTTTC
TTTTAA