Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g009490.2.1
CDS Infomation	Poly(A) RNA polymerase cid14 (AHRD V3.3 *** W9RAG3_9ROSA)
Sequence	ATGGGAGAACATGAGGGATGGGCAGAGCCAAGTGGGCTATTGCCGAACGGGCTATTGCCC AATGCAGAACCAATGATCCGAGTCCTTGACTCGGAAAGATGGTCGAGGGCTGAGGAAAGG ACTGATGAGTTAATTGTCTGTATTCAGCCTAATCGGCCATCGGAGGAGCGGAGAAATGCT GTTGCTGATTATGTCCAGCGGCTCATTATGAAATGCTTCCCTTGTCAGGTTTTCACTTTT GGTTCAGTACCCTTGAAGACTTACCTTCCTGATGGTGACATTGATTTAACTGCCTTCAGT AATAATCAAACTTTGAAAGATACATGGGCTTATCAGGTTAGAGATATGTTAGAGGAGGAG GAGAAAAATGAAAATGCTGAATTTCGTGTCAAGGAGGTTCAATACATTCAAGCTGAAGTG AAGTTAATAAAATGTTTAGTTGAAAATATTGTGGTTGACATATCTTTCAATCAGCTAGGC GGTTTGTGTACCCTTTGCTTCCTTGAGGAGGTCGATCATCTGATAAACCAGAATCATTTA TTCAAGCGCAGCATTATTTTGATTAAGGCATGGTGTTATTACGAGAGCCGTTTACTGGGT GCTCATCACGGTCTTATTTCAACTTATGCTTTGGAAACCTTAGTTCTTTATATATTTCAC ATGTTCAACAATTCGTTTGCTGGGCCGCTTGAGGTTCTGTATCGCTTCTTGGAGTTCTTC AGCAACTTTGACTGGGACAACTTTTGTGTTAGCTTGTGGGGACCTGTGCCAATTAGTTCG CTTCCTGATGTCACTGCGGAACCTCCTCGAAAGGATAGTGGCGAATTGCTCCTCAGCAAA TTGTTTCTTGACGCCTGTAGCTCTGTATATGCTGTTTTCCCTGCTGGCCAGGAAAACCAA GGACAACCATTTATGTCTAAGCATTTTAATGTGATTGATCCTTTACGAGTAAACAACAAC CTTGGCCGCAGTGTGAGTAAAGGTAACTTCTATAGGATACGGAGTGCATTTGGATTTGGT GCCAAACGACTGGCAAGATTACTGGACTGCCCCGAAGAAAATGTCATTCATGAAGTAAAT CAGTTCTTTATGAATACATGGGACAGGCATGGCAGTGGTCAAAGGCCAGATGCACCTGGG GCTGAGTTGTGCCCGAGATTGGCATCACTGGATGACCTACCTGACTCCGAGTACTTGAGG GTCAACTCTGGTGAGAAAAAGGTGAATGAAAAATCTTCTGGTCATGGTGTTGAGGTGGAA GGAACTGGATCGCGGATTGTTTCCTCTCAACATGGTAATCATTTAGCTGGAAGCTTCTCT AGAATGAATGATTCAGCTGAATCCTCTTATACCGAGAGCCAAAAGAGTTATGGAAATTTG AGCACCTCAAGGGGATCTGATCAAACGAAAAAGGAGGTCACTTCCACTCAGGTTGTACGT TCTGATAAAAGTCACAGAAATTTGAGATCTGATCAAACAGTGAACGAGACACAGGGTAAG TTTGTTTTTGCTAGAACACGGTCTAGTCCTGAACTGACGGACACATATGGTGAAGTTACT TCTCAAGGAAAGCATGGCAATACTCCAGAGACTGCAAAAATGCAACCTACTCCATTGAGG CAGGATGGCAGGAACTGGAGGAAGAATCAAGGATCTGAAAATTTAGCAAGTCAGAGTGGT CGATCTCTAAACAATGATGCATCATCTATCAGACATTTTCCATCTCATCAAAGTCTTGAT GCCGTCGCTGACTCCAACAGTAGATCAAATAGCTTTAACCAAGATGCAGGTTTAGATGCT CCGAATGAAGAGTTCTCATTCACGGGTGGTACACAGGGGATGCATCAGGATGAGCAAGAT CTTGTGAACCTGATGGCATCGACTTCACTCCACAGTTTTAATGGACAAGTTCATTTGCCA TTTAATTGGGCTTCAGCTCAACTGCCTTTCCCTATCTCACCTTCTGTTCTGGCTTCAATG GGATATAATCAACGAAATTTTCCGGGATTAGTTTCAGCTAATTTTCCTGTGATTGATCCT GCATCTTCCAATATGCAATTTCCTCATGGTATGATTGCGCCCCACTTAAATCATTACATC CCAGGTCTTGGGTTGAGTCCATCTTCTGAAGATACAATTGACCGGAATAGTGAAAACTTT AGTTCTATGGATATGAACTCAGGTGAGGTGATCAAAGACATCTGGCATGAGCCAGATGCA GGCTCCACCGTCGAATTTGACCCAGAAAATGGAAATTATGAAGCACCTCAATGTGATCAT AAGCCACATGCAATCCAGTCAGGTTTTGATTTTGTTCCTTCCTCTTGGGTGAGTAGCTCT AGTACTAGAGCTCAGCAGAAGCATACAAAGGAAAAACGTGGGCCAATCAAGGAAGAACAT TCTGATGATATTCAGTTTCAGGATAACAGAATGAGGGATGTTTATGCTGAAGAAAGATGG GCAAGTTCAAGGTTCTCAACCACTGCTCACAGTAGTTCTGTGAGAAGCAAAACCTCTTCT GAGAGTTCTTGGGATGGTTCTTCTTCTAAAAGTACAAAGTCAACAAGGGGAAGACGGGGA AATAAAACAGGTGCTGCAGAGCCAACTACTGGTTATGGAAAAGGTAAGATGATGTCTGAC CATATTTCTAACCATGCTGAGGAGGATGATCAGGATTGGAACTCCGTGTCAACCCTGGGT ACTGAAATGGCTGAGGGAAGCCAAGTACCTCAATCTGTTATTTCCATGCACATTGCAAGG CATCATCTGCCTGAATACGAAGGTGCTCAGCCAAGTGGATCCGACTCAATAATGCCCATT GCACCAATGCTCATAGGGCCTGGTTCTCGGCAAAGAATGACTGATAATTCTGGGGTTTTT GCATTTTATCCCACCGGACCACCAGTTCCCTTTCTTACAATGCTCCCAGTATATCCTGAT GCATCAACCAGCCACTTTGGAAGAGAAGAATGCTTTGATAATCGTGATTTAGGCCACAAC CTTGATCTGTCTGAGGGTCTTGATCACACTGAAAATCTGAATACTTCCCATGCTATTAGA GGAGCTACTTCCATAGAAGCATCTGGTGGACACAGGTCTGATATACTTAACAGTGACTTT GCTAGTCATTGGCAAAACTTACAATATGGACGGTTTTGCCAAAATCCAAGGCATCCCGGG CCTCTTGTTTATCCTTCTCCTGTTATGGTACCACCTGCATACTTACAGGGTCGTTTCCCA TGGGATGGTCCTGGAAGACCGTCGTCAGCCAACATGAACCTTTTTACTCAGCTGATGAAC TATGGTCCTCGTGTATTACCCATTTCACCGCTACAGTCTGTTGCAAATAGACCTCCCAAT ATGTTTCAACAATATGTGGATGACATACCAAGATATCGTAGCGGGACAGGAACATATTTG CCAAATCCAAAGGCTTCAGTCAGGGATCGACACGCTCCTGGTACAAGAAGGGGGAGTTAC AACCATGACAGAAACGATAATTATGGTGAGGGGAACTGGAATGCAAATTCAAAATCCCGT GCTGGTGGTCGCAACTACAACCGCAGCCAATCTGAGAAAGTAAACTCAAGATTGGATCGT CCAGTGTCCAGTGAGAGCCGAACTGACAGGTCATGGAGCTCCTCTCATAGACACGACTCC TTCCCTTCATATCAGTCCCAAAATGGTCCATTGCATGCAAACTCAAGCCCAAGTGTCCCT CCCAATATGGTGTATGGCATGTATCCTCTATCATCAATGAACCCTAGTGCAGCGTCTTCA AATGGACCTGGTGGCCCTCCAGTTGTAATGTTTTATCCATACGACCATAATTCTACTTAT AATAATTCACATGGAGAACAGCTTGAGTTTGGGTCTATGGGTCCCGTAGGCTTCTCAGGT ACAAATGAACAAGCCCAGCCAGGTGATGGAAGTCGACCAAAGGGAGCAATTGAAGAACAG AGATTTCATGCAGTCTCTGGGCAACGGTCTTCCCCTGATCAACCATCTTCACCTCATTAT CAAAGAAAGAAGACTGAGAAGTGGTGA

Peptide Sequence

PEP ID	Solyc10g009490.2.1
PEP Infomation	Poly(A) RNA polymerase cid14 (AHRD V3.3 *** W9RAG3_9ROSA)
Sequence	MGEHEGWAEPSGLLPNGLLPNAEPMIRVLDSERWSRAEERTDELIVCIQPNRPSEERRNA VADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSNNQTLKDTWAYQVRDMLEEE EKNENAEFRVKEVQYIQAEVKLIKCLVENIVVDISFNQLGGLCTLCFLEEVDHLINQNHL FKRSIILIKAWCYYESRLLGAHHGLISTYALETLVLYIFHMFNNSFAGPLEVLYRFLEFF SNFDWDNFCVSLWGPVPISSLPDVTAEPPRKDSGELLLSKLFLDACSSVYAVFPAGQENQ GQPFMSKHFNVIDPLRVNNNLGRSVSKGNFYRIRSAFGFGAKRLARLLDCPEENVIHEVN QFFMNTWDRHGSGQRPDAPGAELCPRLASLDDLPDSEYLRVNSGEKKVNEKSSGHGVEVE GTGSRIVSSQHGNHLAGSFSRMNDSAESSYTESQKSYGNLSTSRGSDQTKKEVTSTQVVR SDKSHRNLRSDQTVNETQGKFVFARTRSSPELTDTYGEVTSQGKHGNTPETAKMQPTPLR QDGRNWRKNQGSENLASQSGRSLNNDASSIRHFPSHQSLDAVADSNSRSNSFNQDAGLDA PNEEFSFTGGTQGMHQDEQDLVNLMASTSLHSFNGQVHLPFNWASAQLPFPISPSVLASM GYNQRNFPGLVSANFPVIDPASSNMQFPHGMIAPHLNHYIPGLGLSPSSEDTIDRNSENF SSMDMNSGEVIKDIWHEPDAGSTVEFDPENGNYEAPQCDHKPHAIQSGFDFVPSSWVSSS STRAQQKHTKEKRGPIKEEHSDDIQFQDNRMRDVYAEERWASSRFSTTAHSSSVRSKTSS ESSWDGSSSKSTKSTRGRRGNKTGAAEPTTGYGKGKMMSDHISNHAEEDDQDWNSVSTLG TEMAEGSQVPQSVISMHIARHHLPEYEGAQPSGSDSIMPIAPMLIGPGSRQRMTDNSGVF AFYPTGPPVPFLTMLPVYPDASTSHFGREECFDNRDLGHNLDLSEGLDHTENLNTSHAIR GATSIEASGGHRSDILNSDFASHWQNLQYGRFCQNPRHPGPLVYPSPVMVPPAYLQGRFP WDGPGRPSSANMNLFTQLMNYGPRVLPISPLQSVANRPPNMFQQYVDDIPRYRSGTGTYL PNPKASVRDRHAPGTRRGSYNHDRNDNYGEGNWNANSKSRAGGRNYNRSQSEKVNSRLDR PVSSESRTDRSWSSSHRHDSFPSYQSQNGPLHANSSPSVPPNMVYGMYPLSSMNPSAASS NGPGGPPVVMFYPYDHNSTYNNSHGEQLEFGSMGPVGFSGTNEQAQPGDGSRPKGAIEEQ RFHAVSGQRSSPDQPSSPHYQRKKTEKW*

Transcript Sequence

Transcript ID	Solyc10g009490.2.1
Transcript Infomation	Poly(A) RNA polymerase cid14 (AHRD V3.3 *** W9RAG3_9ROSA)
Sequence	CATATCTTCCTTCTCCTATTATTTTTGCAGAACAACATATACATAAACACAAAAAAAATC CCCTGCATCTTCAAATACGTCAATGGCAATTCCTCAATATTTCTTTGGATTCTGATTTTT TCACACACAGACACACACTCAAACTTCAATCTCTGTTACCCATTTTCAGGAATTAACACT TCCCATATCTAGTTTTTTTTTTTTCTGGATTTTCAAGATCCTGGAAATCTTGTAGAAATG AAACTTTCCATGTTTATTACATAGAAAGAAGAAGAGGCTTATGGGTTTTTTTGTTTTGGT TTTTTAGGTTTATTTTTGAATAAAGAACAAGTTTTTTATTTGGGGTTTCTTTATCTAATC TATCTCCATTTGAATCGCTTGATCAAGAAGTGTTATAGCAGCTTTATTTTTTTTCTTACC CTTTTAGGGTTTCTGTTTACCCCTTTTTCATTTTCAATTATTTGGGGGTCGAAAAATGTT CTTTTTTTTGTTTTAGATGAAGTATTAGATTCTGTTGGTATTCAAGTTTACTTGTTTTGG ATATCCTGGTTAGTGGAGTTATTAATTTAGCAGAAAGGTTGGTAGATAGATATTGGATTT GAAAAGAAGGTGAAATTTTTAAGTTCTTTTAGTGGGTTAAACCAAGTAGTGGTGTATGGG AGAACATGAGGGATGGGCAGAGCCAAGTGGGCTATTGCCGAACGGGCTATTGCCCAATGC AGAACCAATGATCCGAGTCCTTGACTCGGAAAGATGGTCGAGGGCTGAGGAAAGGACTGA TGAGTTAATTGTCTGTATTCAGCCTAATCGGCCATCGGAGGAGCGGAGAAATGCTGTTGC TGATTATGTCCAGCGGCTCATTATGAAATGCTTCCCTTGTCAGGTTTTCACTTTTGGTTC AGTACCCTTGAAGACTTACCTTCCTGATGGTGACATTGATTTAACTGCCTTCAGTAATAA TCAAACTTTGAAAGATACATGGGCTTATCAGGTTAGAGATATGTTAGAGGAGGAGGAGAA AAATGAAAATGCTGAATTTCGTGTCAAGGAGGTTCAATACATTCAAGCTGAAGTGAAGTT AATAAAATGTTTAGTTGAAAATATTGTGGTTGACATATCTTTCAATCAGCTAGGCGGTTT GTGTACCCTTTGCTTCCTTGAGGAGGTCGATCATCTGATAAACCAGAATCATTTATTCAA GCGCAGCATTATTTTGATTAAGGCATGGTGTTATTACGAGAGCCGTTTACTGGGTGCTCA TCACGGTCTTATTTCAACTTATGCTTTGGAAACCTTAGTTCTTTATATATTTCACATGTT CAACAATTCGTTTGCTGGGCCGCTTGAGGTTCTGTATCGCTTCTTGGAGTTCTTCAGCAA CTTTGACTGGGACAACTTTTGTGTTAGCTTGTGGGGACCTGTGCCAATTAGTTCGCTTCC TGATGTCACTGCGGAACCTCCTCGAAAGGATAGTGGCGAATTGCTCCTCAGCAAATTGTT TCTTGACGCCTGTAGCTCTGTATATGCTGTTTTCCCTGCTGGCCAGGAAAACCAAGGACA ACCATTTATGTCTAAGCATTTTAATGTGATTGATCCTTTACGAGTAAACAACAACCTTGG CCGCAGTGTGAGTAAAGGTAACTTCTATAGGATACGGAGTGCATTTGGATTTGGTGCCAA ACGACTGGCAAGATTACTGGACTGCCCCGAAGAAAATGTCATTCATGAAGTAAATCAGTT CTTTATGAATACATGGGACAGGCATGGCAGTGGTCAAAGGCCAGATGCACCTGGGGCTGA GTTGTGCCCGAGATTGGCATCACTGGATGACCTACCTGACTCCGAGTACTTGAGGGTCAA CTCTGGTGAGAAAAAGGTGAATGAAAAATCTTCTGGTCATGGTGTTGAGGTGGAAGGAAC TGGATCGCGGATTGTTTCCTCTCAACATGGTAATCATTTAGCTGGAAGCTTCTCTAGAAT GAATGATTCAGCTGAATCCTCTTATACCGAGAGCCAAAAGAGTTATGGAAATTTGAGCAC CTCAAGGGGATCTGATCAAACGAAAAAGGAGGTCACTTCCACTCAGGTTGTACGTTCTGA TAAAAGTCACAGAAATTTGAGATCTGATCAAACAGTGAACGAGACACAGGGTAAGTTTGT TTTTGCTAGAACACGGTCTAGTCCTGAACTGACGGACACATATGGTGAAGTTACTTCTCA AGGAAAGCATGGCAATACTCCAGAGACTGCAAAAATGCAACCTACTCCATTGAGGCAGGA TGGCAGGAACTGGAGGAAGAATCAAGGATCTGAAAATTTAGCAAGTCAGAGTGGTCGATC TCTAAACAATGATGCATCATCTATCAGACATTTTCCATCTCATCAAAGTCTTGATGCCGT CGCTGACTCCAACAGTAGATCAAATAGCTTTAACCAAGATGCAGGTTTAGATGCTCCGAA TGAAGAGTTCTCATTCACGGGTGGTACACAGGGGATGCATCAGGATGAGCAAGATCTTGT GAACCTGATGGCATCGACTTCACTCCACAGTTTTAATGGACAAGTTCATTTGCCATTTAA TTGGGCTTCAGCTCAACTGCCTTTCCCTATCTCACCTTCTGTTCTGGCTTCAATGGGATA TAATCAACGAAATTTTCCGGGATTAGTTTCAGCTAATTTTCCTGTGATTGATCCTGCATC TTCCAATATGCAATTTCCTCATGGTATGATTGCGCCCCACTTAAATCATTACATCCCAGG TCTTGGGTTGAGTCCATCTTCTGAAGATACAATTGACCGGAATAGTGAAAACTTTAGTTC TATGGATATGAACTCAGGTGAGGTGATCAAAGACATCTGGCATGAGCCAGATGCAGGCTC CACCGTCGAATTTGACCCAGAAAATGGAAATTATGAAGCACCTCAATGTGATCATAAGCC ACATGCAATCCAGTCAGGTTTTGATTTTGTTCCTTCCTCTTGGGTGAGTAGCTCTAGTAC TAGAGCTCAGCAGAAGCATACAAAGGAAAAACGTGGGCCAATCAAGGAAGAACATTCTGA TGATATTCAGTTTCAGGATAACAGAATGAGGGATGTTTATGCTGAAGAAAGATGGGCAAG TTCAAGGTTCTCAACCACTGCTCACAGTAGTTCTGTGAGAAGCAAAACCTCTTCTGAGAG TTCTTGGGATGGTTCTTCTTCTAAAAGTACAAAGTCAACAAGGGGAAGACGGGGAAATAA AACAGGTGCTGCAGAGCCAACTACTGGTTATGGAAAAGGTAAGATGATGTCTGACCATAT TTCTAACCATGCTGAGGAGGATGATCAGGATTGGAACTCCGTGTCAACCCTGGGTACTGA AATGGCTGAGGGAAGCCAAGTACCTCAATCTGTTATTTCCATGCACATTGCAAGGCATCA TCTGCCTGAATACGAAGGTGCTCAGCCAAGTGGATCCGACTCAATAATGCCCATTGCACC AATGCTCATAGGGCCTGGTTCTCGGCAAAGAATGACTGATAATTCTGGGGTTTTTGCATT TTATCCCACCGGACCACCAGTTCCCTTTCTTACAATGCTCCCAGTATATCCTGATGCATC AACCAGCCACTTTGGAAGAGAAGAATGCTTTGATAATCGTGATTTAGGCCACAACCTTGA TCTGTCTGAGGGTCTTGATCACACTGAAAATCTGAATACTTCCCATGCTATTAGAGGAGC TACTTCCATAGAAGCATCTGGTGGACACAGGTCTGATATACTTAACAGTGACTTTGCTAG TCATTGGCAAAACTTACAATATGGACGGTTTTGCCAAAATCCAAGGCATCCCGGGCCTCT TGTTTATCCTTCTCCTGTTATGGTACCACCTGCATACTTACAGGGTCGTTTCCCATGGGA TGGTCCTGGAAGACCGTCGTCAGCCAACATGAACCTTTTTACTCAGCTGATGAACTATGG TCCTCGTGTATTACCCATTTCACCGCTACAGTCTGTTGCAAATAGACCTCCCAATATGTT TCAACAATATGTGGATGACATACCAAGATATCGTAGCGGGACAGGAACATATTTGCCAAA TCCAAAGGCTTCAGTCAGGGATCGACACGCTCCTGGTACAAGAAGGGGGAGTTACAACCA TGACAGAAACGATAATTATGGTGAGGGGAACTGGAATGCAAATTCAAAATCCCGTGCTGG TGGTCGCAACTACAACCGCAGCCAATCTGAGAAAGTAAACTCAAGATTGGATCGTCCAGT GTCCAGTGAGAGCCGAACTGACAGGTCATGGAGCTCCTCTCATAGACACGACTCCTTCCC TTCATATCAGTCCCAAAATGGTCCATTGCATGCAAACTCAAGCCCAAGTGTCCCTCCCAA TATGGTGTATGGCATGTATCCTCTATCATCAATGAACCCTAGTGCAGCGTCTTCAAATGG ACCTGGTGGCCCTCCAGTTGTAATGTTTTATCCATACGACCATAATTCTACTTATAATAA TTCACATGGAGAACAGCTTGAGTTTGGGTCTATGGGTCCCGTAGGCTTCTCAGGTACAAA TGAACAAGCCCAGCCAGGTGATGGAAGTCGACCAAAGGGAGCAATTGAAGAACAGAGATT TCATGCAGTCTCTGGGCAACGGTCTTCCCCTGATCAACCATCTTCACCTCATTATCAAAG AAAGAAGACTGAGAAGTGGTGATACAAGGAACAGTGGCGAGGCCTGGCATTTTACTCATC ATTCTTAGCCTCATGTCGAATTGGGCTTTCGTGCACTAGCTTTTTAATTTTTGCTAGTAA ATGGTGGTCACTCACATCTTGGTGCCTAGATTCAACGGAAGATGTGAAGTCATGATTTAG CGGAAGCTGCCCCCTCTTCAACGACATCAAAGGTGAAATGTCATGTAGATTATTGACATA TTGTAACCTCAGTGAATTTTAGGTGTTCAACTTGTTATATTAGTGTTACCATTGGAAATC ATTTCCACAGGGAATGTACAAGAATTTTGTTTTACAAGATGACTCTGTAGTAGCTTTTGT TCACTCAGGATTTCAACAGTGTAGTGGTATATGATTACCATGGTGAATTTATTAGACTAA AGATTAGAATTCATTTCAATTATGATTTCTCTTACAGTTGCTACTACACCAGGAAGTTCC CTTTGATACCTGCAATGTCTTTGTTTATATATTTTTCA