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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g009240.3.1
CDS Infomation

3-ketoacyl-CoA synthase (AHRD V3.3 *** B9GRP8_POPTR)
Sequence

ATGGCAAATGAAAGTATAGACATGGAAAAAGAGAGACTAACAGCTGAGATGAATTTCAAA
GATTCATCTTCAGTTGTTATTAAAATCCGGCAAAAATTGCCGGATTTTTTACAATCTGTT
AAGCTCAAATATGTCAAACTTGGTTATGGTTATTCATGTAACCCTCTCACACTTGTTCTC
GTTGCTACCATTTTTTCTATACTTACCCTAACCGGTCTAAAATTAGACCGGTTTTACGAT
ACATGGAGAAATGAACCAACTTTACTTTTAATTGAGACTTCAACCGGTCTAACCGGTTTG
ATAGTACTATTTTTGTTACTAGGGGTATATTATGTAAAAAAACCTAGACCGGTTTTTTTG
GTTGATTTTGCGTGTTATAAACCTGAAGATGAACGAAAAATATCTGTCGATTCGTTTTTG
AATATGACAGAAACAAATGGTGCATTTGAAGAGGAAACTATAGTATTTCAAAAAAAGATA
TCTCATCGTTCAGGTTTAGGTGACGAGACATATTTACCTAGAGGAATCACATCCGTCCCA
CCAAACCTCAACATGAAAGAGGCACGCGCTGAGGCGGAGGCGGTTATGTTTGGTGCATTG
GATTCATTATTTAGTAAAACACAAATCAAGCCAGAGGAAATTGGGATTCTTATAGTGAAT
TGTAGTTTGTTTAATCCAACGCCATCGCTTTCATCAATGATTGTGAATCACTACAAGCTC
AAAACTGACACCAAAAGTTATAATTTAGGTGGAATGGGATGTAGTGCTGGCTTAATTTCA
ATTGATTTAGCCAAACAATTGTTAAAAGCAAATCCAAATTCATATGCTGTGGTAGTTAGC
ATGGAAAACATTACATTAAATTGGTATTTTGGAAATGATAGATCAATGTTGCTATGCAAT
TGTATATTTCGTATGGGAGGAGCAGCTATGCTTTTGTCTAACAAGTCCAAAGATCGAACC
CGGTCTAAATATGAGCTGGTCCACACTGTTCGAACTCATAAAGGTGCAGATGACAATAGC
TACAACTGTGTGTATCAAAGAGAAGATGACAAGGGTGTCGTAGGGGTGTCACTAGCTCGT
GAACTTATGGCCGTAGCTGGTGATGCTCTCAAAACTAACATCACCACCCTAGGGCCATCT
GTGTTACCCCTTACTGAGCAATTCAGGTTTTTCATGACATTGGTGAAGAGGAAACTCTTG
AAAGCTAAAGTGAAACCCTACATACCGGATTTCAAGCTAGCATTCGAGCATTTTTGTATA
CACGCGGGAGGAAGGGCAGTATTAGATGAAATACAAAACAACTTAAGCCTAAGTGATTGG
CATATGGAGCCATCAAGGATGACACTCCATAGATTTGGTAACACGTCGAGTAGTTCGTTA
TGGTATGAGTTAGCTTACACAGAATCAAAAGGAAGAGTGAAGAAAGGAGATAGAGTGTGG
CAAATTGCATTTGGTTCAGGTTTCAAATGTAATAGCGCAGTTTGGAAATCACTTAGGGTT
ATTGATTGTGATGAAGTGAATGCAAATGGAAACCCTTGGGCTGATTGCATCCAACGTTAC
CCTGTGAAAGTTGCCCTTGCAAAGCAATAG

Peptide Sequence

PEP ID

Solyc10g009240.3.1
PEP Infomation

3-ketoacyl-CoA synthase (AHRD V3.3 *** B9GRP8_POPTR)
Sequence

MANESIDMEKERLTAEMNFKDSSSVVIKIRQKLPDFLQSVKLKYVKLGYGYSCNPLTLVL
VATIFSILTLTGLKLDRFYDTWRNEPTLLLIETSTGLTGLIVLFLLLGVYYVKKPRPVFL
VDFACYKPEDERKISVDSFLNMTETNGAFEEETIVFQKKISHRSGLGDETYLPRGITSVP
PNLNMKEARAEAEAVMFGALDSLFSKTQIKPEEIGILIVNCSLFNPTPSLSSMIVNHYKL
KTDTKSYNLGGMGCSAGLISIDLAKQLLKANPNSYAVVVSMENITLNWYFGNDRSMLLCN
CIFRMGGAAMLLSNKSKDRTRSKYELVHTVRTHKGADDNSYNCVYQREDDKGVVGVSLAR
ELMAVAGDALKTNITTLGPSVLPLTEQFRFFMTLVKRKLLKAKVKPYIPDFKLAFEHFCI
HAGGRAVLDEIQNNLSLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTESKGRVKKGDRVW
QIAFGSGFKCNSAVWKSLRVIDCDEVNANGNPWADCIQRYPVKVALAKQ*

Transcript Sequence

Transcript ID

Solyc10g009240.3.1
Transcript Infomation

3-ketoacyl-CoA synthase (AHRD V3.3 *** B9GRP8_POPTR)
Sequence

ACATCTTTCTTGTATATATATATTATCCATTATATATGTAACTTTATACACCCACACACA
ATTAACACACCACATCAAAATTATTGGAGTTTCAACTTCTTATAATATACACTATTTTTT
GTTTCTTCTTCTTCAACTTCATATATAGAAAATGGCAAATGAAAGTATAGACATGGAAAA
AGAGAGACTAACAGCTGAGATGAATTTCAAAGATTCATCTTCAGTTGTTATTAAAATCCG
GCAAAAATTGCCGGATTTTTTACAATCTGTTAAGCTCAAATATGTCAAACTTGGTTATGG
TTATTCATGTAACCCTCTCACACTTGTTCTCGTTGCTACCATTTTTTCTATACTTACCCT
AACCGGTCTAAAATTAGACCGGTTTTACGATACATGGAGAAATGAACCAACTTTACTTTT
AATTGAGACTTCAACCGGTCTAACCGGTTTGATAGTACTATTTTTGTTACTAGGGGTATA
TTATGTAAAAAAACCTAGACCGGTTTTTTTGGTTGATTTTGCGTGTTATAAACCTGAAGA
TGAACGAAAAATATCTGTCGATTCGTTTTTGAATATGACAGAAACAAATGGTGCATTTGA
AGAGGAAACTATAGTATTTCAAAAAAAGATATCTCATCGTTCAGGTTTAGGTGACGAGAC
ATATTTACCTAGAGGAATCACATCCGTCCCACCAAACCTCAACATGAAAGAGGCACGCGC
TGAGGCGGAGGCGGTTATGTTTGGTGCATTGGATTCATTATTTAGTAAAACACAAATCAA
GCCAGAGGAAATTGGGATTCTTATAGTGAATTGTAGTTTGTTTAATCCAACGCCATCGCT
TTCATCAATGATTGTGAATCACTACAAGCTCAAAACTGACACCAAAAGTTATAATTTAGG
TGGAATGGGATGTAGTGCTGGCTTAATTTCAATTGATTTAGCCAAACAATTGTTAAAAGC
AAATCCAAATTCATATGCTGTGGTAGTTAGCATGGAAAACATTACATTAAATTGGTATTT
TGGAAATGATAGATCAATGTTGCTATGCAATTGTATATTTCGTATGGGAGGAGCAGCTAT
GCTTTTGTCTAACAAGTCCAAAGATCGAACCCGGTCTAAATATGAGCTGGTCCACACTGT
TCGAACTCATAAAGGTGCAGATGACAATAGCTACAACTGTGTGTATCAAAGAGAAGATGA
CAAGGGTGTCGTAGGGGTGTCACTAGCTCGTGAACTTATGGCCGTAGCTGGTGATGCTCT
CAAAACTAACATCACCACCCTAGGGCCATCTGTGTTACCCCTTACTGAGCAATTCAGGTT
TTTCATGACATTGGTGAAGAGGAAACTCTTGAAAGCTAAAGTGAAACCCTACATACCGGA
TTTCAAGCTAGCATTCGAGCATTTTTGTATACACGCGGGAGGAAGGGCAGTATTAGATGA
AATACAAAACAACTTAAGCCTAAGTGATTGGCATATGGAGCCATCAAGGATGACACTCCA
TAGATTTGGTAACACGTCGAGTAGTTCGTTATGGTATGAGTTAGCTTACACAGAATCAAA
AGGAAGAGTGAAGAAAGGAGATAGAGTGTGGCAAATTGCATTTGGTTCAGGTTTCAAATG
TAATAGCGCAGTTTGGAAATCACTTAGGGTTATTGATTGTGATGAAGTGAATGCAAATGG
AAACCCTTGGGCTGATTGCATCCAACGTTACCCTGTGAAAGTTGCCCTTGCAAAGCAATA
GTGGCCTAGACGATA