Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g009220.3.1
CDS Infomation

RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT4G00830.6)
Sequence

ATGGCAGAGAATACTGAAATTGATGACCGTGTGGATCTTGACGATGAAAATTACTCTGAG
GAAGAGGAAGATGCAGATGCAGAACTGGTAGAAGATGAAGGAGCTGGAGAAGTCGGTGAT
GAAAATGGCGAAGAACAATCATATGATTCTGGAGGTGGAGACAGTGGGAGAGAGCAGTCT
CCAGAGGCAGATATGGGTGATGTTTCGGAGCCTGCTGCAGATGAAGAAAAGCCTAGTGCT
TCTCTTTCTGAAGAGGAACAAAAAGAGCATGCTGAACTTCTAGCTCTCCCTCCACATGGG
TCTGAGGTTTTTATTGGTGGTATTCCTCGAGATGTTTCTGAAGAAGACTTGAGGGATCTC
TGTGAACCACTCGGTGAAATACATGAGGTCAGAGTCATGAGAAATAGGGATACTGGTGAA
AGCAAGGGTTTTGCCTTTGTAGCATTCAAAACAAAAGATGAGGCACAAAAGACTATTGAA
GAATTGCATAACAAAGAATATAAGGGAAAAACCTTAAGGTGTTCGCTGTCAGAAACTAAA
TACAGATTGTTCATTGGTAATGTACCAAAGAGCTGGTCTGATGATGACTTCAGAAAAGTC
ATTGATGGGACTGGTCCTGGTGCAGAATTAATAGAACTCATAAAGGATCCTCAAAACCCA
GCACGTAATAGGGGTTTTGCTTTTGTTGAATATTACAATAATGCCTGTGCGGATTACTCT
CGGAGAAAAATGGTAAGTACAAACTTTAAGCTGGAGGGAAATTCACCAACTGTCACCTGG
GCTGATCCGAAGATTACACCTGATCATTCTTCTGCCGCTGCTCAGGTCAAAGCACTCTAT
GTGAAGAACATTCCAGAAAACACTCCTACTGAACAATTGAAGGAATTGTTCCAACGCCAT
GGTGAAGTTACCAGAGTTGTTATGCCACCAGCCAAGGTTGGTGGTAAACGAGACTTTGGA
TTTGTCCATTATGCAGAAAGGTCAAGCGCTCTGAAAGCTGTCAAAGACACTGAAACATAT
GAAGTAAATGGTCAGATGTTAGAAGTAGTTCTTGCAAAGCCTCAGACTGAAAAGAAGTTT
GATGCAGCTAGTCCTCACAATGCGATGCCACATCATAATTATATTCCCCATCCAGGCTAT
GGTGCATTTCCGATGAACCCGTATGCACCTCTAACTGCTGGTTATGGTGCTGCTGCTGCT
GCTGCTGCCGCTGCGTTCCAACAACCTATGATATATGGTAGAGGACCGATGCCAACAGGT
ATGCAGATGGTGCCAATGGTTTTACCAGATGGTCAGATCGGCTATGTCCTCCAGCAGCCA
GGAGTTCAGGCACCACCTGTTCGGCCTCGTAGGAATGACAGGAACAATGGTGCCGGTGGA
CCACAAGGACGAGGAGGAGGATCCAGTGGTGGCAGTGATGATTCCAACCGTGGTAGACGT
TATCGACCATATTAG

Peptide Sequence

PEP ID

Solyc10g009220.3.1
PEP Infomation

RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT4G00830.6)
Sequence

MAENTEIDDRVDLDDENYSEEEEDADAELVEDEGAGEVGDENGEEQSYDSGGGDSGREQS
PEADMGDVSEPAADEEKPSASLSEEEQKEHAELLALPPHGSEVFIGGIPRDVSEEDLRDL
CEPLGEIHEVRVMRNRDTGESKGFAFVAFKTKDEAQKTIEELHNKEYKGKTLRCSLSETK
YRLFIGNVPKSWSDDDFRKVIDGTGPGAELIELIKDPQNPARNRGFAFVEYYNNACADYS
RRKMVSTNFKLEGNSPTVTWADPKITPDHSSAAAQVKALYVKNIPENTPTEQLKELFQRH
GEVTRVVMPPAKVGGKRDFGFVHYAERSSALKAVKDTETYEVNGQMLEVVLAKPQTEKKF
DAASPHNAMPHHNYIPHPGYGAFPMNPYAPLTAGYGAAAAAAAAAFQQPMIYGRGPMPTG
MQMVPMVLPDGQIGYVLQQPGVQAPPVRPRRNDRNNGAGGPQGRGGGSSGGSDDSNRGRR
YRPY*

Transcript Sequence

Transcript ID

Solyc10g009220.3.1
Transcript Infomation

RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT4G00830.6)
Sequence

CAGGCAGTATATAAAAGAAGTCGAAAGAGCATTTTTGTGTGTGTAAATTTCACTGTATTG
TTGAGATTTAGCTTCTTCGCCTTCAAACTCTCTCCTCCTAAAGAAGCAGAAACACAACAC
AGATAAGCAAAAAACTTGTCTAATTTTGGGCCTGTTTATTTGTTGTATGAGAAAATCTGC
AACACGAAACAGTCATGGCAGAGAATACTGAAATTGATGACCGTGTGGATCTTGACGATG
AAAATTACTCTGAGGAAGAGGAAGATGCAGATGCAGAACTGGTAGAAGATGAAGGAGCTG
GAGAAGTCGGTGATGAAAATGGCGAAGAACAATCATATGATTCTGGAGGTGGAGACAGTG
GGAGAGAGCAGTCTCCAGAGGCAGATATGGGTGATGTTTCGGAGCCTGCTGCAGATGAAG
AAAAGCCTAGTGCTTCTCTTTCTGAAGAGGAACAAAAAGAGCATGCTGAACTTCTAGCTC
TCCCTCCACATGGGTCTGAGGTTTTTATTGGTGGTATTCCTCGAGATGTTTCTGAAGAAG
ACTTGAGGGATCTCTGTGAACCACTCGGTGAAATACATGAGGTCAGAGTCATGAGAAATA
GGGATACTGGTGAAAGCAAGGGTTTTGCCTTTGTAGCATTCAAAACAAAAGATGAGGCAC
AAAAGACTATTGAAGAATTGCATAACAAAGAATATAAGGGAAAAACCTTAAGGTGTTCGC
TGTCAGAAACTAAATACAGATTGTTCATTGGTAATGTACCAAAGAGCTGGTCTGATGATG
ACTTCAGAAAAGTCATTGATGGGACTGGTCCTGGTGCAGAATTAATAGAACTCATAAAGG
ATCCTCAAAACCCAGCACGTAATAGGGGTTTTGCTTTTGTTGAATATTACAATAATGCCT
GTGCGGATTACTCTCGGAGAAAAATGGTAAGTACAAACTTTAAGCTGGAGGGAAATTCAC
CAACTGTCACCTGGGCTGATCCGAAGATTACACCTGATCATTCTTCTGCCGCTGCTCAGG
TCAAAGCACTCTATGTGAAGAACATTCCAGAAAACACTCCTACTGAACAATTGAAGGAAT
TGTTCCAACGCCATGGTGAAGTTACCAGAGTTGTTATGCCACCAGCCAAGGTTGGTGGTA
AACGAGACTTTGGATTTGTCCATTATGCAGAAAGGTCAAGCGCTCTGAAAGCTGTCAAAG
ACACTGAAACATATGAAGTAAATGGTCAGATGTTAGAAGTAGTTCTTGCAAAGCCTCAGA
CTGAAAAGAAGTTTGATGCAGCTAGTCCTCACAATGCGATGCCACATCATAATTATATTC
CCCATCCAGGCTATGGTGCATTTCCGATGAACCCGTATGCACCTCTAACTGCTGGTTATG
GTGCTGCTGCTGCTGCTGCTGCCGCTGCGTTCCAACAACCTATGATATATGGTAGAGGAC
CGATGCCAACAGGTATGCAGATGGTGCCAATGGTTTTACCAGATGGTCAGATCGGCTATG
TCCTCCAGCAGCCAGGAGTTCAGGCACCACCTGTTCGGCCTCGTAGGAATGACAGGAACA
ATGGTGCCGGTGGACCACAAGGACGAGGAGGAGGATCCAGTGGTGGCAGTGATGATTCCA
ACCGTGGTAGACGTTATCGACCATATTAGAGTCGGTGTAATGTTGTACTTGCTACTTACA
TTGAACACCAGACGAGTAATCCAGGACACAACTATTTCCTGTTTCCTCTTTATTTATAAA
AAGGAAACTTAGTTAAAGTAAAAACTTAGACCAATCTCAGCAACTTAATGCGCACTGTAA
CTAAACAAAACATAGATGTTGCCTGCTTGACTAGTTCATAAATTGCTTTATCAATTGTTG
AGATGAACTGCTTAGAGTCACTTGTAGCTTCACCGCTCGTCGTAATTGTTCCAAACGCCC
CGTAACTGCAATGACATGACGTTTGTGTTTGCTTGTTCAAATTTTGGATAGTTTAAGCGT
TTACTTGCACGCATTCCAAGAAAAATAAAATTACACGAATATCACATTGTTGAAATTTTG
AGTAGTTCAAGTTTTTTACACACTATAGTATTGATGATCCCAAAAGATCAAACTTGAAAG
TATAATTTATCACTAATAAGTATAAAATTAGAGGGTGTACTACGCTAAAAACACAATAAA
ATTGTTTTTTTTCGTGTGTGTATGTTTAGTATTAGCAATTGTGCATCTTGAAGCTATTAA
GTCTTTTTTCCAGTTCATCCAAACGAGTTCCCCAATCTTCTCTTATGCTCAATGGTCGAA
CAATTTTGCTACCGTAATCCGCCATAGCTTCATCCTCTGCTGCTTGTTCACTCACTTTTC
TACTACTACTTAACGATGAACTATCTCTTCCATGTCTCTTCTTCTTCATTTTCCGTGCCG
TTGCTTTTTCCAGTGCCTGCAATACGTCAAATCCAGTAAGTTTCTTCTCTTCATCCTTTA
AATCTACTTGTACTCGTTCTTCTTCTGCTTGTTGTATGTTCGTTGTTTGTGATTTCTTCC
AAAATCTCTGCTTCTGCTCTGCCGTATAACCTAAATGATTTGTTTGCGATTTCTTCTGAA
TTTTCTGCTTTTGCTCCGCCGTATATGCTAAATCGAGGTTTCTAAGCTGCGAGTAGAGCT
GAAACTTCCTCGGAGCTCCGGGCGTAAGACAATTCGCCGCCGGTTTAGTGGTGGCGAATG
GTGCCGGAGCGGCAAGTGAAAGGCTCATCGAGGCCCACATGATTTTTCTGGTTACAGTTT
AGAGAGGGAGATTGGAGTAATACAAATACAAATACAAATGGTGTGTGGACCAGAATTATT
TGGGCCTCAACCTTGTAAAAATGGTGTGGGCTAACCTTTTCACGGGCATGTCAATGCAAT
ATTCAATCGCTTCAATAACTCTAATTCATACGTCCGGATACATAGGTTAGCGATGTATTC
GAAATA