Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g009050.3.1
CDS Infomation

DUF616 family protein (AHRD V3.3 *** A0A072UMP6_MEDTR)
Sequence

ATGTTTAAGGAGAAAGAAGGATTGTTCCCCGGGATTCACAAATTCGCACCAAGAAAGAAG
GTGGGGATGCTTCTACTGTGTGCAGTTTCACTAGCAGTTTTCCTATGGGTCGTGCTTATT
GACAGAGGTGAAGCACAAGAAAGTAACCCCTCCATAGGCAATAGGTTATTTCGAGAAGTT
GGACAAAAGGATAATTCTACTACTATTGAGTCGGTAGAACGAACTAATGCTGGACAAAGT
GCATTGACTATCCAACCTCCTCCTCCTGTATATTTTAAAGGATACACTCTTCCTCCTGGG
AATCCATGTGAAAGCTTCACGTTGCCACCCCCGCCCGCAGATAAAAAGAGGACTGGACCA
AGGCCATGTCCAGTATGCTACCTCCCTGTTGAACAAGCGATTGCACTAATGCCTGATGCA
CCATCCTTTTCTCCTGGGGTAAGCAATTTGACTTACATTCATGAAGAAAATTCAGAGAAA
CCCGAGTTTGGAGGATATCCTTCACTGATGCAAAGGAATGATTCATATGATGTAAGAGAG
TCCATGAATGTGCATTGCGGATTTGTTAAAGGAATCAGGCCTGGACATCGAACAGGTTTT
GACATTGATGATTCTGACCTTAATGAGATGGAATCTTGTCGAGGTGTCATTGTGGCATCA
GCAATATTTGGCGCTTTTGATTTGATAAGGCAACCAAAAAATATCAGCGAATATGCCAAG
AAAAATGTCTGCTTTCATATGTTTGTGGATGAACAAACAGAAGTTTTTTTAAGAAACTCT
AGTGAGCTAGATGGTTCCATGAGAATTGGCTTATGGAGAATTGTCACTGTTCACAACCTT
CCTTATGATGATCCGAGGCGAAACGGGAAGGTTCCAAAGCTTCTGCTTCATAGGCTCTTT
CCCAATGCTCGTTATTCTCTATGGATTGATGCAAAACTTGAGCTGGTTGTCGATCCCTAT
CAAATTCTTGAAAGGTTCTTGTGGAGAAAAAATGTCAGCTTTGCAATATCAAAGCATTAT
AGACGCTTTGATGTGTTTGTAGAAGCGGAAGCTAATAAAGCTGCTGGAAAGTTTGACAAT
GCTTCCATCGACTTTCAAGTTGAATTCTATAAAAAGGAAGGTCTAACTCGTTATTCCGCA
GCTAAACTTCCTATTACAAGTGATGTCCCTGAGGGATGTGTAGTAGTAAGGGAGCACATT
CCAGTTTCCAATCTCTTTGCTTGTCTTTGGTTTAACGAAGTGGACCGTTTTACTCCAAGA
GACCAAATTAGCTTCGCCATTGTGAGGGACAAGATAATGTCAAAGACAAATTGGACATTG
AATATGTTCTTGGACTGTGAAAGACGCAACTTTGTGGTTCAGGGGTATCACCGCGACATT
CTTGAGCACTGGTCTCCCCCACCTCCCCCTGCTGCTCCTGAAATTGTTCATCCTCCACCG
CCTGTACCTGATAAAACCCCGCAGACCACAAGCAACATTACAAAGTCAAGTTCAGTTGCT
GAGCCATTAAAGAAGGTACCCTCAAAGCGCGGGAGAGACAGGAAAAAGCGTCATAGAAAA
GTTATTGGAAATTTTGCTTAA

Peptide Sequence

PEP ID

Solyc10g009050.3.1
PEP Infomation

DUF616 family protein (AHRD V3.3 *** A0A072UMP6_MEDTR)
Sequence

MFKEKEGLFPGIHKFAPRKKVGMLLLCAVSLAVFLWVVLIDRGEAQESNPSIGNRLFREV
GQKDNSTTIESVERTNAGQSALTIQPPPPVYFKGYTLPPGNPCESFTLPPPPADKKRTGP
RPCPVCYLPVEQAIALMPDAPSFSPGVSNLTYIHEENSEKPEFGGYPSLMQRNDSYDVRE
SMNVHCGFVKGIRPGHRTGFDIDDSDLNEMESCRGVIVASAIFGAFDLIRQPKNISEYAK
KNVCFHMFVDEQTEVFLRNSSELDGSMRIGLWRIVTVHNLPYDDPRRNGKVPKLLLHRLF
PNARYSLWIDAKLELVVDPYQILERFLWRKNVSFAISKHYRRFDVFVEAEANKAAGKFDN
ASIDFQVEFYKKEGLTRYSAAKLPITSDVPEGCVVVREHIPVSNLFACLWFNEVDRFTPR
DQISFAIVRDKIMSKTNWTLNMFLDCERRNFVVQGYHRDILEHWSPPPPPAAPEIVHPPP
PVPDKTPQTTSNITKSSSVAEPLKKVPSKRGRDRKKRHRKVIGNFA*

Transcript Sequence

Transcript ID

Solyc10g009050.3.1
Transcript Infomation

DUF616 family protein (AHRD V3.3 *** A0A072UMP6_MEDTR)
Sequence

ACTATTTGGTTAATCAATAAAAATAAAAAAGTAAAACAGAAAAGTTAGTTATTTAAAGAT
CAAAATGTTTCTATCATATATATTAATATATATAATTTGATTTGACACGTTTTTCTAAAT
GAAAAAATATAAATAAATATGTGATTTGTTTTTGGGAAGGTAAGTCATTCACATTGTGTT
TTAATTAATTTCTTTTTTATAGTATTAATGGAAAATTAAGTTCCTAAATTATAGTAGTTA
TATTTCTTGTACTCCTTTTAGAATTGTATCTATAGAAGTTTATTTATTTTTGAATACCTT
AAGAACCAGCTTATTGTTTTTCGATTCTGATTTGTAAGATTTAATTGAATAGTGGGTCTT
GATTTGATTTTTGGTTTTATTTCTGGAGTTTTTTTTTGGTGAATTGGGTTTTTTTTTATG
AATGAATTTAGTGGAAAGATTTGAACTTTAGAATGAAAAAAGTTGGATTTTTTGGTTAAT
TGTTGATTCTGTGATCTTTTGGTGAGTTGGGTTTTGGTGAATTTATTGGTTTGTTTCTCT
GTGTGGAGGATTTTGTTGAAGTTGTCCACATTAGGAGGTGAAATTTCTACCAAAATTTGA
ACTTTAGAAAGGAAAAAAGTTGGATTTACTGGTTAATTTTTGATTCAGTGATCATTTGGT
GAGTTAGGTCTCTTTTTCTTGTCGAGTTTAGTGGGTTTTTTTCTCAAGTTTGGGGGATTT
TTATTGAAGTAGTCAGCATTAGGAGGTGAGGTTTTTGTACCAAGATTTGAACTTTAGAAA
GGAAAAAGTTGGATTTTTTTGGTTAATTGTTGATTTAGTGATCATTTGGTGAGTTGGGCT
TCCTTTTTCTTGTCGAATTTAGTGGGTTTTTTTCTCAGTTTTGGGGGATTTTGTTGATCT
AGTCAGGCATTAGGAGGTGAGTTTTTGTACCAAGATTTGAACTTTAGAAAGGAAAAAGTT
GGATTTTTTGGGTAAATTGTTGATTCAGTGATCATTTGTTGAGGGGACAACAATGACTAC
AGAGTCATTGGGTTTCTGTCCTTCTGGAAGTTATGGTTCTTTTGCTGCAATAGTTCTGCT
ACATTACAAACTACACTCTGAAAGCCACCAAATATGTTTAAGGAGAAAGAAGGATTGTTC
CCCGGGATTCACAAATTCGCACCAAGAAAGAAGGTGGGGATGCTTCTACTGTGTGCAGTT
TCACTAGCAGTTTTCCTATGGGTCGTGCTTATTGACAGAGGTGAAGCACAAGAAAGTAAC
CCCTCCATAGGCAATAGGTTATTTCGAGAAGTTGGACAAAAGGATAATTCTACTACTATT
GAGTCGGTAGAACGAACTAATGCTGGACAAAGTGCATTGACTATCCAACCTCCTCCTCCT
GTATATTTTAAAGGATACACTCTTCCTCCTGGGAATCCATGTGAAAGCTTCACGTTGCCA
CCCCCGCCCGCAGATAAAAAGAGGACTGGACCAAGGCCATGTCCAGTATGCTACCTCCCT
GTTGAACAAGCGATTGCACTAATGCCTGATGCACCATCCTTTTCTCCTGGGGTAAGCAAT
TTGACTTACATTCATGAAGAAAATTCAGAGAAACCCGAGTTTGGAGGATATCCTTCACTG
ATGCAAAGGAATGATTCATATGATGTAAGAGAGTCCATGAATGTGCATTGCGGATTTGTT
AAAGGAATCAGGCCTGGACATCGAACAGGTTTTGACATTGATGATTCTGACCTTAATGAG
ATGGAATCTTGTCGAGGTGTCATTGTGGCATCAGCAATATTTGGCGCTTTTGATTTGATA
AGGCAACCAAAAAATATCAGCGAATATGCCAAGAAAAATGTCTGCTTTCATATGTTTGTG
GATGAACAAACAGAAGTTTTTTTAAGAAACTCTAGTGAGCTAGATGGTTCCATGAGAATT
GGCTTATGGAGAATTGTCACTGTTCACAACCTTCCTTATGATGATCCGAGGCGAAACGGG
AAGGTTCCAAAGCTTCTGCTTCATAGGCTCTTTCCCAATGCTCGTTATTCTCTATGGATT
GATGCAAAACTTGAGCTGGTTGTCGATCCCTATCAAATTCTTGAAAGGTTCTTGTGGAGA
AAAAATGTCAGCTTTGCAATATCAAAGCATTATAGACGCTTTGATGTGTTTGTAGAAGCG
GAAGCTAATAAAGCTGCTGGAAAGTTTGACAATGCTTCCATCGACTTTCAAGTTGAATTC
TATAAAAAGGAAGGTCTAACTCGTTATTCCGCAGCTAAACTTCCTATTACAAGTGATGTC
CCTGAGGGATGTGTAGTAGTAAGGGAGCACATTCCAGTTTCCAATCTCTTTGCTTGTCTT
TGGTTTAACGAAGTGGACCGTTTTACTCCAAGAGACCAAATTAGCTTCGCCATTGTGAGG
GACAAGATAATGTCAAAGACAAATTGGACATTGAATATGTTCTTGGACTGTGAAAGACGC
AACTTTGTGGTTCAGGGGTATCACCGCGACATTCTTGAGCACTGGTCTCCCCCACCTCCC
CCTGCTGCTCCTGAAATTGTTCATCCTCCACCGCCTGTACCTGATAAAACCCCGCAGACC
ACAAGCAACATTACAAAGTCAAGTTCAGTTGCTGAGCCATTAAAGAAGGTACCCTCAAAG
CGCGGGAGAGACAGGAAAAAGCGTCATAGAAAAGTTATTGGAAATTTTGCTTAAGCAGAT
TCTTGTTTTTCCCCCCTTACCTGTTACAAGGATATCAATTTTGGGGCTAGGAACTTAGCT
ACATGAGTACTATGACTTTTTACACAATGAAGGTAATCAAGTTTTAGGTGTCAAATTTAT
TCATTTTTTGTTGTATATAATTGAAGGCTTACTAATTTTTTTTTCCATATCATAGAAATA
TCATACTGGAAATAGAACTTTCAATAGCTATCTCAGTTACTAATTTTCTATCCCATGTAA
CTCTTGTTTCTGAAGAAAGTACAAGTATTCTAAGGCATTAACACAGTAGTACTAACAAA