Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g008950.3.1
CDS Infomation	Guanylate-binding family protein (AHRD V3.3 *** B9H2Q0_POPTR)
Sequence	ATGAGGAGGCTATTCGGTAGAGGTTCCGCCGGAGAGTCGCCGCAGCAATCTTCTCCGTCA CCGTCGCCGTCGCCTCCACAGACTTCTCCTCCATCCTCTGTCAACATTGCTGCCGGTCCA GCCAGACCGATTCGTTTCGTGTATTGCGATGAGAAAGGGAAGTTCCAGATCGATCCAGAG GCACTTGCTATACTTCAACTCGTCAAAGAGCCTGTTGGTATTGTCTCCGTTTGTGGTCGT GCTCGTCAAGGCAAGAGCTTTATACTTAACCAGCTTCTTGGCAGGAGTAGCGGTTTTCAA GTGGCTGCAACTCATCGGCCATGCACAAAAGGTATCTGGCTGTGGAGTTCACCTTTAAGG AGAACAGCTCTTGATGGAACAGAATACAACCTGTTACTGCTGGACACAGAAGGAATTGAT GCTTATGATCAAACGGGTACATATAGCACACAGATATTCTCCCTGGCAGTCCTTCTTTCA AGTATGTTTGTATATAACCAGATGGGAGGTATAGATGAAGCTGCGCTTGACCGCCTCTCT CTTGTCACTGAAATGACTAGACATATTCGTGTTAGAGCCTCTGGAGGAAGGGCCAGTTCT TCTGAGCTTGGGCAGTTCTCCCCAGTCTTCGTTTGGTTGCTTAGGGATTTTTATTTGGAT TTGGTTGAGGACAACCGCAAAATAACTCCACGGGACTACCTTGAACTTGCATTGAGGCCA GTTCAAGGTGGTGGGAAAGATGTTGCTGCTAAAAACGAGATTAGGGACTCCATTCGTGCT CTTTTCCCTGACAGAGAATGCTTCCCCCTTGTGCGGCCTCTGAGCAATGAAAATGAGCTT CAACGGCTAGATCAAATACCATTGGAAAACCTCAGGCCAGAGTTCAAAGCAGGTCTTGAT GCTTTGACAAGATTTGTTTTTGAGAGGACGAGACCCAAGCAAGTTGGAGCAACTATTATG ACTGGACCGCTCTTTGCTCGCATAACTCAGTCCTTCCTGGATGCTCTTAACAATGGTGCA GTGCCCACCATTACCTCTTCATGGCAGAGTGTTGAGGAAGCTGAGTGTCAAAGGGCATAC GATTCGGCTGCTGAGAGATACATGTCTTCATTTGATCGTTCCAAGCCTCCGGAGGAAGGT GCACTAAGAGAAGCACACGAGGATGCATCTCAAAAGGCCATGGCAGAATTTAATTCTACT GCTGTGGGGGCTGGATCCATCAGGATGAAATATGAGAAGCGTCTCCAAAATTTCATAAAA AAAGCATTTGAGGAGCTTAAAAAGGATGCCTTTAGGGAGGCTTATCTACAATGTTCAAAT GCCATACAGGACATGGAAAAGGAACTGAGGTTGGCTTGCCATGCTCCTGATGCAAATATA GATAGTGTGCTTAAGGTTCTTGATCGTCTAGTGTCCAAGTATGAAGCAACTTGTCAGGGT CCTGAGAAATGGAGAAAATTGATAGTCTTCTTACAGCAAAGCTTGGAAGGTCCACTTTTT GATCTCATCAAGAAGCAAACAGACAAACTTGGATCGGAGAAAACTAGTCTTGCATTAAAG TGCCGCGCCATTGAGGATAAGATGAATTTACTTAACAAACAACTGGAAGCTAGTGAGAAG TATAAATCCGAATATTTGAAGCGTTATGAAGATGCCATCAATGACAAGAAGCAGCTTGCA GATGATTACACGAGTCGTATCACAAATTTGCAGAGTAAATATAGTTCATTGGAAGAAAGA TATTCAAGCTTATCAAAAACATTCACTTCAGCTAAACATGAGTCCTCAGAATGGAAAAGA AAATATGAACAGCTTCTGTTGAAGCAGAAGGCTAATGAAGACCAATCAAGTGCAGAAGTA TCTGTTCTGAAGTCCAGAACTGCTGCCGCTGAAGCAAGGCTGGCTGCTGCCAAAGAGCAA GCTGAATCGGCTCAAGAGGAGGCGGAGGAGTGGAAACGTAAATATGACATTGCCGTCAAG GAAGTTAAGAATGCTCTTGAGAAGGCAGCGTCTGTTCAAGAGCGAGCAAACAAGGAAACC CAGTTGAGAGAAGATGCTTTAAGGGATGAGTTTTCAAGCACCCTGGCGGATAAGGAAGAA GAAATTAAAGACAAGGCATATAAGCTTGAGCATGCTGAGCAGCGTTTAGCAACACTGACT TTGGAGTTGAGGACTGCTGATTCAAAGGTGAGGAACTATGGTCTAGAAGTGTCAGCCTTG AAGGTTGAAATCAAGGAATTGGGTGAAAGGATAGAGAATATAAAGGATACTGCACAATCA TTTGAAAGAGAAGCTAAGATTCTGGAACAGGAGAAGGTTCATCTGGAGCAGAAGTACCGG TCAGAGTTCGATCGATTTGAGGATGTTCAGGATAGATGTAAATCAGCTGAAAGAGAGGCA AAAAGGGCGACTGAGCTTGCTGATAAAGCAAGGGCTGAAGCAGCTGCGGCCCTGAAAGAG AAGAATGAAATTCAACGGTTAGCTATGGAAAGATTAGCTCAGATTGAGAAGGCTGACAGA GCTATTGAAAAGTTAGAGAGGGAAAGGGAAGACTTGACTGATGAAGTAGGGAGGTATCAT CGCGCTGAGAAGGATGCAAGGTCAAAAGTTGCAATGCTGGAGGCCCGAGTAGAAGAAAGG GAAAAGGAAATTGAGATGCTACTGAAATCAAATAATGAACAAAGGGCCAGTACTGTGCAA GTCCTTGAAAGTCTGTTAGAGACTGAGCGTGCAGCGCGGTCTGAAGCAACCAATAGGGCG GAAGCACTCTCTCTTCAGTTGCAAGCTACACAAGGAAAGCTAGATCTTCTTCAACAACAG TTAACTGCAGTTCGGCTGAATGAAACTGCACTGGATAGCAAACTTAGAACTGCTTCCCAT GGCAAACGTGCCAGGATAGATGAATACGAAGCTGGAATTGAATCTGTCCATGACATGGAT ACAAATGATAGACCAATCAGAGGAAATAAGAGGTCCAAGAGTACAACCAGTCCCTTAAAG TATACCTCCCCAGAAGATGGAGGTTCTGTATTCAGAGGAGAAGATGATGGTCATAGTCAA CAAACGAATGGTGAAGATTATACAAAGTTTACTGTGCAGAAACTAAAGCAGGAACTTACA AAGCATAACTTTGGCGCTGAACTGCTCCAACTGAAGAACGCAAACAAGAAGGATATCTTA GCTTTGTATGAGAAATGCGTCCTCCAGAAATCATAG

Peptide Sequence

PEP ID	Solyc10g008950.3.1
PEP Infomation	Guanylate-binding family protein (AHRD V3.3 *** B9H2Q0_POPTR)
Sequence	MRRLFGRGSAGESPQQSSPSPSPSPPQTSPPSSVNIAAGPARPIRFVYCDEKGKFQIDPE ALAILQLVKEPVGIVSVCGRARQGKSFILNQLLGRSSGFQVAATHRPCTKGIWLWSSPLR RTALDGTEYNLLLLDTEGIDAYDQTGTYSTQIFSLAVLLSSMFVYNQMGGIDEAALDRLS LVTEMTRHIRVRASGGRASSSELGQFSPVFVWLLRDFYLDLVEDNRKITPRDYLELALRP VQGGGKDVAAKNEIRDSIRALFPDRECFPLVRPLSNENELQRLDQIPLENLRPEFKAGLD ALTRFVFERTRPKQVGATIMTGPLFARITQSFLDALNNGAVPTITSSWQSVEEAECQRAY DSAAERYMSSFDRSKPPEEGALREAHEDASQKAMAEFNSTAVGAGSIRMKYEKRLQNFIK KAFEELKKDAFREAYLQCSNAIQDMEKELRLACHAPDANIDSVLKVLDRLVSKYEATCQG PEKWRKLIVFLQQSLEGPLFDLIKKQTDKLGSEKTSLALKCRAIEDKMNLLNKQLEASEK YKSEYLKRYEDAINDKKQLADDYTSRITNLQSKYSSLEERYSSLSKTFTSAKHESSEWKR KYEQLLLKQKANEDQSSAEVSVLKSRTAAAEARLAAAKEQAESAQEEAEEWKRKYDIAVK EVKNALEKAASVQERANKETQLREDALRDEFSSTLADKEEEIKDKAYKLEHAEQRLATLT LELRTADSKVRNYGLEVSALKVEIKELGERIENIKDTAQSFEREAKILEQEKVHLEQKYR SEFDRFEDVQDRCKSAEREAKRATELADKARAEAAAALKEKNEIQRLAMERLAQIEKADR AIEKLEREREDLTDEVGRYHRAEKDARSKVAMLEARVEEREKEIEMLLKSNNEQRASTVQ VLESLLETERAARSEATNRAEALSLQLQATQGKLDLLQQQLTAVRLNETALDSKLRTASH GKRARIDEYEAGIESVHDMDTNDRPIRGNKRSKSTTSPLKYTSPEDGGSVFRGEDDGHSQ QTNGEDYTKFTVQKLKQELTKHNFGAELLQLKNANKKDILALYEKCVLQKS*

Transcript Sequence

Transcript ID	Solyc10g008950.3.1
Transcript Infomation	Guanylate-binding family protein (AHRD V3.3 *** B9H2Q0_POPTR)
Sequence	ACTCTAATTATCAAATATAGATAATAGTGCCCTCCTCTTTTTCCCGATCAGGACAATTCG TTGATTCGTTTTATCCTTCTATCTATTTAATCTATAGTGCTGCCTTTTTTTCGATCGAAA ACAAGTGCGTTGGTTCGTTTTTCAAATTAAATTGTTTTATCAACTTTAAACTTAAAAGAC GTCTATTGACTGTCCTCACAGTCTTATAAAGTAAGAAATCATTTCCTCCACACCGATTCC ATTTCCCTCTTTTTCTAATCAAATTCTCTCTCTCTACTAATACCCATGAGGAGGCTATTC GGTAGAGGTTCCGCCGGAGAGTCGCCGCAGCAATCTTCTCCGTCACCGTCGCCGTCGCCT CCACAGACTTCTCCTCCATCCTCTGTCAACATTGCTGCCGGTCCAGCCAGACCGATTCGT TTCGTGTATTGCGATGAGAAAGGGAAGTTCCAGATCGATCCAGAGGCACTTGCTATACTT CAACTCGTCAAAGAGCCTGTTGGTATTGTCTCCGTTTGTGGTCGTGCTCGTCAAGGCAAG AGCTTTATACTTAACCAGCTTCTTGGCAGGAGTAGCGGTTTTCAAGTGGCTGCAACTCAT CGGCCATGCACAAAAGGTATCTGGCTGTGGAGTTCACCTTTAAGGAGAACAGCTCTTGAT GGAACAGAATACAACCTGTTACTGCTGGACACAGAAGGAATTGATGCTTATGATCAAACG GGTACATATAGCACACAGATATTCTCCCTGGCAGTCCTTCTTTCAAGTATGTTTGTATAT AACCAGATGGGAGGTATAGATGAAGCTGCGCTTGACCGCCTCTCTCTTGTCACTGAAATG ACTAGACATATTCGTGTTAGAGCCTCTGGAGGAAGGGCCAGTTCTTCTGAGCTTGGGCAG TTCTCCCCAGTCTTCGTTTGGTTGCTTAGGGATTTTTATTTGGATTTGGTTGAGGACAAC CGCAAAATAACTCCACGGGACTACCTTGAACTTGCATTGAGGCCAGTTCAAGGTGGTGGG AAAGATGTTGCTGCTAAAAACGAGATTAGGGACTCCATTCGTGCTCTTTTCCCTGACAGA GAATGCTTCCCCCTTGTGCGGCCTCTGAGCAATGAAAATGAGCTTCAACGGCTAGATCAA ATACCATTGGAAAACCTCAGGCCAGAGTTCAAAGCAGGTCTTGATGCTTTGACAAGATTT GTTTTTGAGAGGACGAGACCCAAGCAAGTTGGAGCAACTATTATGACTGGACCGCTCTTT GCTCGCATAACTCAGTCCTTCCTGGATGCTCTTAACAATGGTGCAGTGCCCACCATTACC TCTTCATGGCAGAGTGTTGAGGAAGCTGAGTGTCAAAGGGCATACGATTCGGCTGCTGAG AGATACATGTCTTCATTTGATCGTTCCAAGCCTCCGGAGGAAGGTGCACTAAGAGAAGCA CACGAGGATGCATCTCAAAAGGCCATGGCAGAATTTAATTCTACTGCTGTGGGGGCTGGA TCCATCAGGATGAAATATGAGAAGCGTCTCCAAAATTTCATAAAAAAAGCATTTGAGGAG CTTAAAAAGGATGCCTTTAGGGAGGCTTATCTACAATGTTCAAATGCCATACAGGACATG GAAAAGGAACTGAGGTTGGCTTGCCATGCTCCTGATGCAAATATAGATAGTGTGCTTAAG GTTCTTGATCGTCTAGTGTCCAAGTATGAAGCAACTTGTCAGGGTCCTGAGAAATGGAGA AAATTGATAGTCTTCTTACAGCAAAGCTTGGAAGGTCCACTTTTTGATCTCATCAAGAAG CAAACAGACAAACTTGGATCGGAGAAAACTAGTCTTGCATTAAAGTGCCGCGCCATTGAG GATAAGATGAATTTACTTAACAAACAACTGGAAGCTAGTGAGAAGTATAAATCCGAATAT TTGAAGCGTTATGAAGATGCCATCAATGACAAGAAGCAGCTTGCAGATGATTACACGAGT CGTATCACAAATTTGCAGAGTAAATATAGTTCATTGGAAGAAAGATATTCAAGCTTATCA AAAACATTCACTTCAGCTAAACATGAGTCCTCAGAATGGAAAAGAAAATATGAACAGCTT CTGTTGAAGCAGAAGGCTAATGAAGACCAATCAAGTGCAGAAGTATCTGTTCTGAAGTCC AGAACTGCTGCCGCTGAAGCAAGGCTGGCTGCTGCCAAAGAGCAAGCTGAATCGGCTCAA GAGGAGGCGGAGGAGTGGAAACGTAAATATGACATTGCCGTCAAGGAAGTTAAGAATGCT CTTGAGAAGGCAGCGTCTGTTCAAGAGCGAGCAAACAAGGAAACCCAGTTGAGAGAAGAT GCTTTAAGGGATGAGTTTTCAAGCACCCTGGCGGATAAGGAAGAAGAAATTAAAGACAAG GCATATAAGCTTGAGCATGCTGAGCAGCGTTTAGCAACACTGACTTTGGAGTTGAGGACT GCTGATTCAAAGGTGAGGAACTATGGTCTAGAAGTGTCAGCCTTGAAGGTTGAAATCAAG GAATTGGGTGAAAGGATAGAGAATATAAAGGATACTGCACAATCATTTGAAAGAGAAGCT AAGATTCTGGAACAGGAGAAGGTTCATCTGGAGCAGAAGTACCGGTCAGAGTTCGATCGA TTTGAGGATGTTCAGGATAGATGTAAATCAGCTGAAAGAGAGGCAAAAAGGGCGACTGAG CTTGCTGATAAAGCAAGGGCTGAAGCAGCTGCGGCCCTGAAAGAGAAGAATGAAATTCAA CGGTTAGCTATGGAAAGATTAGCTCAGATTGAGAAGGCTGACAGAGCTATTGAAAAGTTA GAGAGGGAAAGGGAAGACTTGACTGATGAAGTAGGGAGGTATCATCGCGCTGAGAAGGAT GCAAGGTCAAAAGTTGCAATGCTGGAGGCCCGAGTAGAAGAAAGGGAAAAGGAAATTGAG ATGCTACTGAAATCAAATAATGAACAAAGGGCCAGTACTGTGCAAGTCCTTGAAAGTCTG TTAGAGACTGAGCGTGCAGCGCGGTCTGAAGCAACCAATAGGGCGGAAGCACTCTCTCTT CAGTTGCAAGCTACACAAGGAAAGCTAGATCTTCTTCAACAACAGTTAACTGCAGTTCGG CTGAATGAAACTGCACTGGATAGCAAACTTAGAACTGCTTCCCATGGCAAACGTGCCAGG ATAGATGAATACGAAGCTGGAATTGAATCTGTCCATGACATGGATACAAATGATAGACCA ATCAGAGGAAATAAGAGGTCCAAGAGTACAACCAGTCCCTTAAAGTATACCTCCCCAGAA GATGGAGGTTCTGTATTCAGAGGAGAAGATGATGGTCATAGTCAACAAACGAATGGTGAA GATTATACAAAGTTTACTGTGCAGAAACTAAAGCAGGAACTTACAAAGCATAACTTTGGC GCTGAACTGCTCCAACTGAAGAACGCAAACAAGAAGGATATCTTAGCTTTGTATGAGAAA TGCGTCCTCCAGAAATCATAGCTTTCAGTGTGCCGGGTTGTGTAGAAAGGTTGTAAGTAT CTCAGTTATAGTCAAAAGCATACTACTTCTGGATTACAAAATTATGTGTTTGCATCCTAA AAACATCCTTTTAAGTTCTATAGGGCTTCTACCCCATTAGGTAGCTATACAATCTTGCTA TATGCTGCTGCCGCCATCGGGGCTTTTCGTGTGACATAATAGTTTTCATTCTGGTGTGCA CTCTAACTTAGGTATTTTTGTTTGAGCCTTCCTAGTGTGGCAGTGGAAGATGGTTTAGAG AGATTATGAAAGTGAGATCACCAGACATCCCTTGTTGTCTCTTTCTTTCTCCATTTGTGC AGTTATTGGTGTTTAGTGAGTACTTAATCCTCGTGTGATTAGTAGTATTAGTATTCTCTT GATTTGCTAAATTTGACAAGTGAAGTAGTTATTAATATTCTTCATTCACTTTTACTTATT ACGTTCATCACGTTTTGTTTCATGAGAAGTTTTTATAGTCCATAAATGTTGTGTTTATAT TTAAGATCATAAATCCTACAATTGTCTTGTTTATTT