Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g008630.3.1
CDS Infomation

External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial (AHRD V3.3 *** ENDB1_SOLTU)
Sequence

ATGAGGGGTTTCACATATTTAAGCAAAGTTCTTCATAGTCATTCTTCTTATTCTAAACTT
TTGGTTCTCTGTTCTATCAGTACTGGAGGTCTGTTGGTGTATGCGGAATCAAATGTAGAG
AGTGGAAAACAAGTTGTTGAACAGAATCAACCAGAGTCTAAGAAGAAGAGAGTAGTGGTG
CTTGGAACAGGATGGGGTGGTACCAGCTTCTTAAAAGATCTTGATATTTCTTCGTATGAT
GTAAAAGTGGTTTCGCCGCGGAACTATTTTGCATTTACACCACTGTTACCTAGTGTCACA
TGTGGTACAGTTGAGGCACGAAGCGTAGTAGAGCCGGTCCGGAACATAATAAAGAAGAGA
AGTGGAGAGATTCAATTCTGGGAAGCAGAATGTCTGAAGATTGATCCAGAAAACCACAGA
GTATCTTGCCGTTCTGGTATCAATGATAATTTGGCAGGACATAATGATTTCTCCCTACAA
TATGACTATTTGGTTGTCGCAGTAGGAGCTCAAGTAAACACTTTTAACACACCAGGTGTT
ATGGAACATTGCCACTTTCTGAAGGAAGTTGAAGATGCTCAAAGGATACGGAGGACAGTA
ATAGATTGTTTTGAAAAATCTGTCATTCCTGGCCTAAGTGAAGAAGAGCGAAGGACCAAC
CTCCATTTTGTTATAGTTGGCGGTGGTCCAACTGGTGTAGAATTTGCTGCTGAGCTACAT
GACTATGTTTATGAGGATTTAGTAAAAATATACCCTTCTGTTAAGGATTTTGTGAAGATA
ACAGTTATTCAGTCCGGAGATCATATCCTGAACACATTTGATGAAAGAATAAGCTCATTT
GCTGAACAGAAATTTCAAAGAGATGGAATTGAGGTTTCGACAGGTTGCCGTGTCACTAGT
GTGTCTGATCATTTCATCAGCATGAAAGTAAAATCTACAGGAAAAAACGTTGAAGTACCT
TACGGGATGGTTGTATGGTCAAGTGGAGTTGGTACCCGTCCATTTGTGAAGGATTTCATG
GAGCAAGTTGGCCAGGAAAAAAGACGTATTCTAACAACTGATGAATGGTTGCGAGTGAAG
GGCTGTAGTAACGTGTACGCACTAGGTGATTGTGCATCTGTTGATCAACGTAAAGTAATG
GAAGATATTTCAGCCATTTTTAAAGCTGCGGATAAGGATGACTCTGGAACATTAAGCGTC
AAGGAATTCCGAGATGTTTTAGAAGACATAATTATCCGTTATCCTCAAGTGGCCTTATAT
CTGAAGAACAAACATTTGTTAGAGGCGAAAGACTTATTTAGGGATTCAGAGGGAAATGAA
AGAGAGGAGGTAGATATTGAAGGTTTTAAGTTGGCCCTTTCTCATGTAGATTCTCAGATG
AAAAGTTTACCTGCCACTGCTCAGGTTGCTGCTCAACAAGGTACATATCTTGCTAGATGC
TTTAACCGCTGGGATCAATGCAAAAGTAATCCTGAAGGACCTCGCCGTTTTAAAAGCTCT
GGACGTCATGAATTTCTTCCCTTCGAGTATCGTCATTTAGGGCAATTCGCCCCTTTAGGT
GGAGATCAAGCAGCAGCAGAACTTCCCGGAGACTGGGTTTCTATGGGCCATAGCACACAG
TGGCTATGGTACTCTGTGTATGCAAGCAAGCAAGTTAGCTGGCGCACGAGGTACTTAGTG
GTTGGTGATTGGGTAAGAAGATACATTTTCGGAAGAGATTCAAGCCGGATTTGA

Peptide Sequence

PEP ID

Solyc10g008630.3.1
PEP Infomation

External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial (AHRD V3.3 *** ENDB1_SOLTU)
Sequence

MRGFTYLSKVLHSHSSYSKLLVLCSISTGGLLVYAESNVESGKQVVEQNQPESKKKRVVV
LGTGWGGTSFLKDLDISSYDVKVVSPRNYFAFTPLLPSVTCGTVEARSVVEPVRNIIKKR
SGEIQFWEAECLKIDPENHRVSCRSGINDNLAGHNDFSLQYDYLVVAVGAQVNTFNTPGV
MEHCHFLKEVEDAQRIRRTVIDCFEKSVIPGLSEEERRTNLHFVIVGGGPTGVEFAAELH
DYVYEDLVKIYPSVKDFVKITVIQSGDHILNTFDERISSFAEQKFQRDGIEVSTGCRVTS
VSDHFISMKVKSTGKNVEVPYGMVVWSSGVGTRPFVKDFMEQVGQEKRRILTTDEWLRVK
GCSNVYALGDCASVDQRKVMEDISAIFKAADKDDSGTLSVKEFRDVLEDIIIRYPQVALY
LKNKHLLEAKDLFRDSEGNEREEVDIEGFKLALSHVDSQMKSLPATAQVAAQQGTYLARC
FNRWDQCKSNPEGPRRFKSSGRHEFLPFEYRHLGQFAPLGGDQAAAELPGDWVSMGHSTQ
WLWYSVYASKQVSWRTRYLVVGDWVRRYIFGRDSSRI*

Transcript Sequence

Transcript ID

Solyc10g008630.3.1
Transcript Infomation

External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial (AHRD V3.3 *** ENDB1_SOLTU)
Sequence

GGATAAACCAATTCTCAAATCCCATAGTTTGGACCTAAAATTTTTATTTTTTAAAAAGTT
GTCAGACTGGTAATATTTTCAGACAACTCATATGATGACACTATTATACTTAGTATTCTT
TTCTTTTTTTTCACCACTCCTTTTGTCTCATAATTACTCATTTTTATCCATTAAATCAAG
ATTTTGACAGAAATCTTGAGAAAAGATTCAATCTTTGAACAATTTAAGAAAGAAGATGAG
GGGTTTCACATATTTAAGCAAAGTTCTTCATAGTCATTCTTCTTATTCTAAACTTTTGGT
TCTCTGTTCTATCAGTACTGGAGGTCTGTTGGTGTATGCGGAATCAAATGTAGAGAGTGG
AAAACAAGTTGTTGAACAGAATCAACCAGAGTCTAAGAAGAAGAGAGTAGTGGTGCTTGG
AACAGGATGGGGTGGTACCAGCTTCTTAAAAGATCTTGATATTTCTTCGTATGATGTAAA
AGTGGTTTCGCCGCGGAACTATTTTGCATTTACACCACTGTTACCTAGTGTCACATGTGG
TACAGTTGAGGCACGAAGCGTAGTAGAGCCGGTCCGGAACATAATAAAGAAGAGAAGTGG
AGAGATTCAATTCTGGGAAGCAGAATGTCTGAAGATTGATCCAGAAAACCACAGAGTATC
TTGCCGTTCTGGTATCAATGATAATTTGGCAGGACATAATGATTTCTCCCTACAATATGA
CTATTTGGTTGTCGCAGTAGGAGCTCAAGTAAACACTTTTAACACACCAGGTGTTATGGA
ACATTGCCACTTTCTGAAGGAAGTTGAAGATGCTCAAAGGATACGGAGGACAGTAATAGA
TTGTTTTGAAAAATCTGTCATTCCTGGCCTAAGTGAAGAAGAGCGAAGGACCAACCTCCA
TTTTGTTATAGTTGGCGGTGGTCCAACTGGTGTAGAATTTGCTGCTGAGCTACATGACTA
TGTTTATGAGGATTTAGTAAAAATATACCCTTCTGTTAAGGATTTTGTGAAGATAACAGT
TATTCAGTCCGGAGATCATATCCTGAACACATTTGATGAAAGAATAAGCTCATTTGCTGA
ACAGAAATTTCAAAGAGATGGAATTGAGGTTTCGACAGGTTGCCGTGTCACTAGTGTGTC
TGATCATTTCATCAGCATGAAAGTAAAATCTACAGGAAAAAACGTTGAAGTACCTTACGG
GATGGTTGTATGGTCAAGTGGAGTTGGTACCCGTCCATTTGTGAAGGATTTCATGGAGCA
AGTTGGCCAGGAAAAAAGACGTATTCTAACAACTGATGAATGGTTGCGAGTGAAGGGCTG
TAGTAACGTGTACGCACTAGGTGATTGTGCATCTGTTGATCAACGTAAAGTAATGGAAGA
TATTTCAGCCATTTTTAAAGCTGCGGATAAGGATGACTCTGGAACATTAAGCGTCAAGGA
ATTCCGAGATGTTTTAGAAGACATAATTATCCGTTATCCTCAAGTGGCCTTATATCTGAA
GAACAAACATTTGTTAGAGGCGAAAGACTTATTTAGGGATTCAGAGGGAAATGAAAGAGA
GGAGGTAGATATTGAAGGTTTTAAGTTGGCCCTTTCTCATGTAGATTCTCAGATGAAAAG
TTTACCTGCCACTGCTCAGGTTGCTGCTCAACAAGGTACATATCTTGCTAGATGCTTTAA
CCGCTGGGATCAATGCAAAAGTAATCCTGAAGGACCTCGCCGTTTTAAAAGCTCTGGACG
TCATGAATTTCTTCCCTTCGAGTATCGTCATTTAGGGCAATTCGCCCCTTTAGGTGGAGA
TCAAGCAGCAGCAGAACTTCCCGGAGACTGGGTTTCTATGGGCCATAGCACACAGTGGCT
ATGGTACTCTGTGTATGCAAGCAAGCAAGTTAGCTGGCGCACGAGGTACTTAGTGGTTGG
TGATTGGGTAAGAAGATACATTTTCGGAAGAGATTCAAGCCGGATTTGATGAGTTCAACG
CCACATAGAAGGCGGTGCGCGTGTTCTTCACTCTTTTGCTTGACATGCTGAGGTTGTTAT
GTTTATGCTTGAATCAGGTTACATGCCATTGTATTTGTATCTATTTTTCATGATCAGTTC
CTGGAGAAATACACTAAGAATCTTTGCAACTGTGAATGTATAAACTTGCTCCTTAACAAG
TGACTGAGATTGTTAATTAGATTGTAAGTTATCTCCTTTTTTTTTTTAGATTCAAGCATC
TCGTGTTTGAAATTTATTGACCTGATTAATTTGAATTTGCGTGGTAGAAAGCAATTTTTG
TGCCTGGTGTCAT