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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g008600.3.1
CDS Infomation

embryo defective 1923 (AHRD V3.3 *** AT4G28210.1)
Sequence

ATGTCGATTACTCTCTCATTTTTCTCATCTTCAATTCCCACTATCAAGAAAACCCATAAA
ATCTCCTCAAATTTTCCTTCAAATGCTTTCTCTCATAATCAAATTCTTGATTTTCCCTCA
TCTGTTGCCAGAATTAAGCCTTTGAAACTCGAATTGAAACACAAATGTTGTGGAATTTTC
ACTAGTGATTGTGGATTTCAGTTACGTAGGAAAAATGGGTTTATTGTGGAAGCTGAGAGT
AGTGGAGTAGATTATGGGAATAGTGTTGATAAAGCTGAAATTGATGTTCGTGGAGAGAGC
ACAATGCCTGATAGATTCAGATACTTGACTAAAGAAGCTCCTGATAAGCCTGTTAGATGG
CCTTGGTTCATAGCATTAGCCTTTCTTCTATATGCCTGGAGGACTGTCTTATGGGAACTG
GGTAATTGGAAAAAGGCTGTGGATGCTGTCTTCCGATTTCTCGGTTACATCTCGAAACTT
GCATTCGCTGTTGTATACTACTTCATAGGGGATCAGATCACAGCTGTAATTAGATTTATT
GAATCATCAATTTATTCCATTCGAGCTTTCTACTCCAGTGTAATTGCATATGCACCAGTA
CAAGAGCTGACAACAATCATCATTTTGGCCTCTTGTGTTCTTGCTATTGGTGAAGCGGCA
GCTCCAGATTCTGTGAACAGCCAACCGTACCTTCTTACAGCAGCTGGAATAATGGGATTT
GCTGCTGTGAGAGGTTATATTTCCGAGCTGTTCTTTTGGTTTATACTCTTAGGCTTGTTT
TTCTTTGCTCGATTTATCAAAAAAAGAGATTATGTGTCTTCCGCAATGCCTGCTGCTGCT
GCATTAGCTGCTGTGGGAGAACCTTGGGTTAGACTGGTAGTAATGGTCTCTTACGCAGCT
TTGGCCATTCTGCAATACTCTAAAACACCTTTCAATAAAAGTGAAGGGGAAACTATCGGT
GCAGTTAGGAAGGTCCCGGTTCCTCTGATATGTGCTGCACTGGCCATTGGTGTTCGACTT
GCTGCAAAATGGGCTGGTTATCGACATTTGACTTGGATGATCGTTTGA

Peptide Sequence

PEP ID

Solyc10g008600.3.1
PEP Infomation

embryo defective 1923 (AHRD V3.3 *** AT4G28210.1)
Sequence

MSITLSFFSSSIPTIKKTHKISSNFPSNAFSHNQILDFPSSVARIKPLKLELKHKCCGIF
TSDCGFQLRRKNGFIVEAESSGVDYGNSVDKAEIDVRGESTMPDRFRYLTKEAPDKPVRW
PWFIALAFLLYAWRTVLWELGNWKKAVDAVFRFLGYISKLAFAVVYYFIGDQITAVIRFI
ESSIYSIRAFYSSVIAYAPVQELTTIIILASCVLAIGEAAAPDSVNSQPYLLTAAGIMGF
AAVRGYISELFFWFILLGLFFFARFIKKRDYVSSAMPAAAALAAVGEPWVRLVVMVSYAA
LAILQYSKTPFNKSEGETIGAVRKVPVPLICAALAIGVRLAAKWAGYRHLTWMIV*

Transcript Sequence

Transcript ID

Solyc10g008600.3.1
Transcript Infomation

embryo defective 1923 (AHRD V3.3 *** AT4G28210.1)
Sequence

AAATATAGGCAATTGTTAATATGATACCGCACTATATATGATATTAATAATATTTTTATC
AAGTCATACCAATTAAAAAGTAATTATATAAAAAAAAAATCTAATTTATACAACACATCT
GGAAAAAAAATTTGATTGTAGCAAAAAAAAAAAAATTGCACTAAAATACGACTATTTTCC
TATTGAAACACACAGCAGACCCAAAAAATTGTTCTTATCTCACCTAATATTTACATAATT
TATGCATAAAAATTTTCAATTTATAGATTTATGAATTTTTCGGGTCGGGTCACCGGGTTG
TCTGGCGGGCTACCGGATTTTGCAAAACCCCAATTTTCTGGTAATGGCAAAACCCTAAAC
CCTTAACAACAATGTCGATTACTCTCTCATTTTTCTCATCTTCAATTCCCACTATCAAGA
AAACCCATAAAATCTCCTCAAATTTTCCTTCAAATGCTTTCTCTCATAATCAAATTCTTG
ATTTTCCCTCATCTGTTGCCAGAATTAAGCCTTTGAAACTCGAATTGAAACACAAATGTT
GTGGAATTTTCACTAGTGATTGTGGATTTCAGTTACGTAGGAAAAATGGGTTTATTGTGG
AAGCTGAGAGTAGTGGAGTAGATTATGGGAATAGTGTTGATAAAGCTGAAATTGATGTTC
GTGGAGAGAGCACAATGCCTGATAGATTCAGATACTTGACTAAAGAAGCTCCTGATAAGC
CTGTTAGATGGCCTTGGTTCATAGCATTAGCCTTTCTTCTATATGCCTGGAGGACTGTCT
TATGGGAACTGGGTAATTGGAAAAAGGCTGTGGATGCTGTCTTCCGATTTCTCGGTTACA
TCTCGAAACTTGCATTCGCTGTTGTATACTACTTCATAGGGGATCAGATCACAGCTGTAA
TTAGATTTATTGAATCATCAATTTATTCCATTCGAGCTTTCTACTCCAGTGTAATTGCAT
ATGCACCAGTACAAGAGCTGACAACAATCATCATTTTGGCCTCTTGTGTTCTTGCTATTG
GTGAAGCGGCAGCTCCAGATTCTGTGAACAGCCAACCGTACCTTCTTACAGCAGCTGGAA
TAATGGGATTTGCTGCTGTGAGAGGTTATATTTCCGAGCTGTTCTTTTGGTTTATACTCT
TAGGCTTGTTTTTCTTTGCTCGATTTATCAAAAAAAGAGATTATGTGTCTTCCGCAATGC
CTGCTGCTGCTGCATTAGCTGCTGTGGGAGAACCTTGGGTTAGACTGGTAGTAATGGTCT
CTTACGCAGCTTTGGCCATTCTGCAATACTCTAAAACACCTTTCAATAAAAGTGAAGGGG
AAACTATCGGTGCAGTTAGGAAGGTCCCGGTTCCTCTGATATGTGCTGCACTGGCCATTG
GTGTTCGACTTGCTGCAAAATGGGCTGGTTATCGACATTTGACTTGGATGATCGTTTGAT
ATGCACCCCTTTCGAGCTGGTAGAGCATATTTAGTTGTTAGTTTCTACAGTGAGAGCATG
TTCTCTCATTTGGCAGAATTGCTTGTTGTTTCTCTTTTTATTGCCTGTCCAGTTCTTTTT
GTACAACTTAGAGCTTATTTTCTTTCAAATTTTGCTCTTGACTGTACTAAAGTTGTAATC
TTTATTGCCTTCTACATATATGAAATTTCTCAATTTTGAGTTCTCTTACA