Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g008520.3.1
CDS Infomation

Auxin-responsive GH3 family protein (AHRD V3.3 *** AT4G03400.2)
Sequence

ATGGAACCATCACTAGATAAGTCCAATTATTACACTGACACTGATGAAATGATCAATTGG
TTCGAAAAATCCGCCGAAAATGCTGCCGCTGTACAGCGGCAGACGCTTCGGCGGATTCTT
GAACTCAACCATGGTGTTGAGTACCTAAAAAAATGGCTTGGAGATATTAGACTTCAAGAT
GAAAATGCTATGGAATCACTTTATGCTACTATGGTTCCTCTTGCTTCTCATGCAGATTTT
GAGCCTTATATACATAGAATTGCTGATGGTGAAAAAGCTCCTTTACTCACTCAAGACCCT
ATGAGAACTTTGTCCTTAAGTTCTGGAACCACAGAGGGAAGACAGAAATTTGTACCATTT
ACTCATCATAGCTCCCAAACAACTCTTCAAATTTTCAAATTGGCAGCAGCTTATAGATCA
AGGATTTATTCAATAAGAGAAGGTGGAAAAGTTCTTGAATTTATATATAGTAGCAAACAA
ACCAAAACAAAAGGGGGATTAATAGCAGGAACAGCCACAACACATTATTATGCTAGTGAA
GAATTCAAGATTAAACAACAACACACAAAGTCTTTTACTTGTAGCCCTGAGGAAGTTATT
TCAAGTGGAGATTATAAACAATCAACATATTGTCATCTACTTCTTGGTTTATATTATTGT
GATGAGATTGAATTTGTCACATCAACTTTTGCATATAGTATAGTTCAAGCATTCAGATCA
TTTGAAGAGTTGTGGAAGGAATTGTGTCATGATATAAGAGAAGGTACTCTTACTTCAAGA
ATCAACATAACCAAAGTTCGAAAAGTCCTATTAGGTATGATTGTCCCTAATCCAGAGTTG
GCATCAAGAATTGAATCAATATGTGAAGAAGTAGAAAAGGAAAATTGGGTTAGTATAATC
CCAAAATTATGGCCAAATGTTAAATATGTTTACACAATAATGACAGGCTCAATGCAACCA
TACTTGAACAAATTAAGACATTATTGTGGGGATTTGCCTTTGGTTAGTGCTGATTATGGG
TCCACAGAGAGTTGGATTGGAGTGAATGTGGAACCTTCATCTCCACCAGAGAAAGTAACT
TTTGCAATTATACCCACTTTTTCTTACTTTGAATTCATACCACTACATAGAAGTAAGTCT
CAAAGTTACAATAATAGCCACAAAGATGCTAATCTTCTAGCAAATGATGATTTTATTGAA
GATGAGCCTGTTCCCTTATCTCAAGTCAAGATAGGACAAGAATATGAAATTGTCCTCACT
ACTTTCACAGGTCTTTATCGGTATAGACTAGGGGATGTAGTAGAAGTTGCTGGTTTCCAC
AAGAAGACCCCCAAACTCAACTTTATATGCAGGAGAAAGCTGATATTAACAGTAAACATC
GATAAGAATACTGAACAGGACCTTCAGTTAGTGGTGGAGAGAGGTTCGCGAATACTAATA
AGCAAGTCAAGAGCTGAGCTAGTAGACTTCACAAGCCATGCAAATGTATCAAAAAGACCA
GGCCATTATGTGATCTATTGGGAAATCAAAGGTGATGTTGATGAAAATGTTTTTGGAGAG
TGTTGTAGGGAGATGGATGCATCTTTTGTTGATCATGGATATGTTGTATCAAGAAAAACA
AATTCAATTGGACCATTAGAACTTTGCATTGTGGAAAGAGGTACTTTCAAGAAGATTTTG
GAACATTTTATTGGAAATGGAGCAGCATTAAGCCAATTCAAGACTCCAAGATGCACTAGC
AACCAAGTACTATTAAGAATCCTTAATGTATGTACCATTAAAAGGTTTTATAGCACAGCT
TATGGTTGA

Peptide Sequence

PEP ID

Solyc10g008520.3.1
PEP Infomation

Auxin-responsive GH3 family protein (AHRD V3.3 *** AT4G03400.2)
Sequence

MEPSLDKSNYYTDTDEMINWFEKSAENAAAVQRQTLRRILELNHGVEYLKKWLGDIRLQD
ENAMESLYATMVPLASHADFEPYIHRIADGEKAPLLTQDPMRTLSLSSGTTEGRQKFVPF
THHSSQTTLQIFKLAAAYRSRIYSIREGGKVLEFIYSSKQTKTKGGLIAGTATTHYYASE
EFKIKQQHTKSFTCSPEEVISSGDYKQSTYCHLLLGLYYCDEIEFVTSTFAYSIVQAFRS
FEELWKELCHDIREGTLTSRINITKVRKVLLGMIVPNPELASRIESICEEVEKENWVSII
PKLWPNVKYVYTIMTGSMQPYLNKLRHYCGDLPLVSADYGSTESWIGVNVEPSSPPEKVT
FAIIPTFSYFEFIPLHRSKSQSYNNSHKDANLLANDDFIEDEPVPLSQVKIGQEYEIVLT
TFTGLYRYRLGDVVEVAGFHKKTPKLNFICRRKLILTVNIDKNTEQDLQLVVERGSRILI
SKSRAELVDFTSHANVSKRPGHYVIYWEIKGDVDENVFGECCREMDASFVDHGYVVSRKT
NSIGPLELCIVERGTFKKILEHFIGNGAALSQFKTPRCTSNQVLLRILNVCTIKRFYSTA
YG*

Transcript Sequence

Transcript ID

Solyc10g008520.3.1
Transcript Infomation

Auxin-responsive GH3 family protein (AHRD V3.3 *** AT4G03400.2)
Sequence

CAATCTCAACAACTATTAGCCCAAAACACTTCATATATATACATCTTCTGCTGGCTACAT
TTTTAGCCTAGCAAATGGAACCATCACTAGATAAGTCCAATTATTACACTGACACTGATG
AAATGATCAATTGGTTCGAAAAATCCGCCGAAAATGCTGCCGCTGTACAGCGGCAGACGC
TTCGGCGGATTCTTGAACTCAACCATGGTGTTGAGTACCTAAAAAAATGGCTTGGAGATA
TTAGACTTCAAGATGAAAATGCTATGGAATCACTTTATGCTACTATGGTTCCTCTTGCTT
CTCATGCAGATTTTGAGCCTTATATACATAGAATTGCTGATGGTGAAAAAGCTCCTTTAC
TCACTCAAGACCCTATGAGAACTTTGTCCTTAAGTTCTGGAACCACAGAGGGAAGACAGA
AATTTGTACCATTTACTCATCATAGCTCCCAAACAACTCTTCAAATTTTCAAATTGGCAG
CAGCTTATAGATCAAGGATTTATTCAATAAGAGAAGGTGGAAAAGTTCTTGAATTTATAT
ATAGTAGCAAACAAACCAAAACAAAAGGGGGATTAATAGCAGGAACAGCCACAACACATT
ATTATGCTAGTGAAGAATTCAAGATTAAACAACAACACACAAAGTCTTTTACTTGTAGCC
CTGAGGAAGTTATTTCAAGTGGAGATTATAAACAATCAACATATTGTCATCTACTTCTTG
GTTTATATTATTGTGATGAGATTGAATTTGTCACATCAACTTTTGCATATAGTATAGTTC
AAGCATTCAGATCATTTGAAGAGTTGTGGAAGGAATTGTGTCATGATATAAGAGAAGGTA
CTCTTACTTCAAGAATCAACATAACCAAAGTTCGAAAAGTCCTATTAGGTATGATTGTCC
CTAATCCAGAGTTGGCATCAAGAATTGAATCAATATGTGAAGAAGTAGAAAAGGAAAATT
GGGTTAGTATAATCCCAAAATTATGGCCAAATGTTAAATATGTTTACACAATAATGACAG
GCTCAATGCAACCATACTTGAACAAATTAAGACATTATTGTGGGGATTTGCCTTTGGTTA
GTGCTGATTATGGGTCCACAGAGAGTTGGATTGGAGTGAATGTGGAACCTTCATCTCCAC
CAGAGAAAGTAACTTTTGCAATTATACCCACTTTTTCTTACTTTGAATTCATACCACTAC
ATAGAAGTAAGTCTCAAAGTTACAATAATAGCCACAAAGATGCTAATCTTCTAGCAAATG
ATGATTTTATTGAAGATGAGCCTGTTCCCTTATCTCAAGTCAAGATAGGACAAGAATATG
AAATTGTCCTCACTACTTTCACAGGTCTTTATCGGTATAGACTAGGGGATGTAGTAGAAG
TTGCTGGTTTCCACAAGAAGACCCCCAAACTCAACTTTATATGCAGGAGAAAGCTGATAT
TAACAGTAAACATCGATAAGAATACTGAACAGGACCTTCAGTTAGTGGTGGAGAGAGGTT
CGCGAATACTAATAAGCAAGTCAAGAGCTGAGCTAGTAGACTTCACAAGCCATGCAAATG
TATCAAAAAGACCAGGCCATTATGTGATCTATTGGGAAATCAAAGGTGATGTTGATGAAA
ATGTTTTTGGAGAGTGTTGTAGGGAGATGGATGCATCTTTTGTTGATCATGGATATGTTG
TATCAAGAAAAACAAATTCAATTGGACCATTAGAACTTTGCATTGTGGAAAGAGGTACTT
TCAAGAAGATTTTGGAACATTTTATTGGAAATGGAGCAGCATTAAGCCAATTCAAGACTC
CAAGATGCACTAGCAACCAAGTACTATTAAGAATCCTTAATGTATGTACCATTAAAAGGT
TTTATAGCACAGCTTATGGTTGATACAATGTTTTTGTAACATAAGTGATCAATTTGCATT
GATATTTACTTTATTTATATGTCGTTTTCATTAAAAACAAATTATTCAAAACAGTTGTTT
TATTAAAAAAAACATCAATATATATCTAATTGTGTATGTTTTTCTCATTTTGCTCCTA