Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g008300.3.1
CDS Infomation

Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** MAN1_ORYSJ)
Sequence

ATGGTTCAATCACCTATGAGCAGAAAGCTAGTAAGAAATGGTGGCCTGTTTTATCCAGTT
ATTGGGTTTGCACTGTTTGTTACTTTTCTTTATTTGGCATTTGGAAACTTGTGGGGTTTC
AATTTCAACAGAGAAGAAATAAAGTTAAGTTTTGTGGAGAGAAATGGAACTCAATTCTTT
GTGGATGGTAAAGCTTTTTATATAAATGGATGGAATTCTTACTGGTTAATGGACCATGCT
GTGGATTATAGTAATAGACCAAGGATTAAAGGGATTTTACAAGCTGGTGCTAAGATGGGG
CTCAGTGTGTGTAGAACTTGGGCTTTTAATGATGGTGGATACAATGCTCTGCAGATTTCC
CCTGGTAGATTTGATGAAAGAGTGTTTAGAGCATTGGATCATGTTATTGCAGAAGCAAGA
AAGAATGGCATTAGATTGATGCTTAGCTTGGTTAACAACCTGCACGCATTCGGGGGGAAG
ACAGAGTATGTGAAGTGGGCAGAGAAAGAAGGTGTTGCTTTAAGCTCTTCCAACGATTCA
TTCTTTTATGACCCTACCATCCGTCGATATTTCAAAAATTATGTCAAGACAGTGCTAACT
AGGAGAAACATATACACTGGGATTGAGTACAGGGATGATCCTACTATCTTTGCATGGGAG
TTAATAAACGAGCCTCGCTGCATGACTGATCCTTCTGGTGACACACTTCAAGACTGGATA
GAAGAGATGTCAACATTTGTGAAGTCGATCGATAGGAAACATCTGCTTACGGTAGGCCTA
GAAGGATTTTATGGCCGTAAAAGTCCCAAAAGATCAACTGGCAATCCAGAATTTTGGGCT
GCTGATCTTGGATCAGATTTCATACGCAACTCCATGCTCTCGACAATTGATTTTGCCTCT
GTACATGTATATCCAGACCATTGGTTCCATGATAAAAATTTCGAAGAAAAACTAAAATTT
GCAGCCAAATGGATGCTTTCTCACATAGAAGACGGTGACAAGGAACTGAGAAAACCAATC
ATGTTCACTGAATTCGGTTTGTCAAATGAGAACGAGGACTTTGAACCTGCTCAACGAGAC
AGATTCTACAAAATGGTTCTTGATTTCATATACAAGTCTGCTAAAAGAAACAGGTCAGGT
GCAGGATCATTCTTCTGGCAGTTCTTGGTTGAAGGAATGGAACTGTATAATGATGATTTC
GGAATTGTTCCATGGGAGAGGCCTTCAACGTACGAGCTAATTACTGAACACTCATGTAGG
CTCGCTAAAGAACACGGGCTACTGCATACACAAATGGAACATTTGAAGGATTTTTGTGCA
TCGACGAGGTTATAA

Peptide Sequence

PEP ID

Solyc10g008300.3.1
PEP Infomation

Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** MAN1_ORYSJ)
Sequence

MVQSPMSRKLVRNGGLFYPVIGFALFVTFLYLAFGNLWGFNFNREEIKLSFVERNGTQFF
VDGKAFYINGWNSYWLMDHAVDYSNRPRIKGILQAGAKMGLSVCRTWAFNDGGYNALQIS
PGRFDERVFRALDHVIAEARKNGIRLMLSLVNNLHAFGGKTEYVKWAEKEGVALSSSNDS
FFYDPTIRRYFKNYVKTVLTRRNIYTGIEYRDDPTIFAWELINEPRCMTDPSGDTLQDWI
EEMSTFVKSIDRKHLLTVGLEGFYGRKSPKRSTGNPEFWAADLGSDFIRNSMLSTIDFAS
VHVYPDHWFHDKNFEEKLKFAAKWMLSHIEDGDKELRKPIMFTEFGLSNENEDFEPAQRD
RFYKMVLDFIYKSAKRNRSGAGSFFWQFLVEGMELYNDDFGIVPWERPSTYELITEHSCR
LAKEHGLLHTQMEHLKDFCASTRL*

Transcript Sequence

Transcript ID

Solyc10g008300.3.1
Transcript Infomation

Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** MAN1_ORYSJ)
Sequence

AATGTTGAAGGTAAAACTATATAAATAAGCATGTAAAGAAATGTTTTGAGAGTTTTTGTT
GGATTTATAACATGTTAGGTACGCTTTCTTACATCTCCACCCATTTCAAATTTATGAATT
TTAATTCTAAATTCAAATCATAATATCTTTGATATTTAAGAAAAAATAAATATATCTTTG
ATATTTTAGTTGGTTTCAAATTTTATTGTTATTAATTAATACTTGTTTCCGTTCAAAATA
AGTGAATTTCAAACATCTTTTTCTTAGTTCAAAATAAATAAAATTTTTAAACATGACAAG
TATTTTTCACAAACCGAGGTGAATACCACACAAACTATATAACATACATGTACAATATAT
TTGAAACTCGATCTATACTTTTAAAGCTACGATATTTTGAGGTTGTGATAAGATTTGTGT
ATGTTCTATCTACTTCAAACCTTACTTACGAAAATTTCACTTAATATATTATTATTGAAT
AATGCTGATTTTTTTTCAAAATAACGTTAGAAAATAATGAGTCACATAAATTGAGACAGA
TAGAATAATATTTTATATAGTTTAGATTTTCTTTTTATCTTACACTATACCCATAAATCA
CGTATGTAACGCCTATCAGAAACAAAAATCAAGTTAGGCCCCCCAAACCCACCCCCCCAC
CCACATGTGATGAAGTTTCATGTTGGGTTTCTTGATTTTTCAAATTGATAAATTTTGTCT
GTGCTTCAAAGTAATGGTTTTGTCACTATTTCACACAAGGGATCTGACTGTTGTTGAAAA
AGAAAGTCACAAGTTCCATAAATTGGGGGAGCTAAGGAGATCCCAGCATTTTCTCAAGTT
GGATCTCCAAAGAGCCTTCTCCAATTTTTACCATTTCTTGAAATGGTTCAATCACCTATG
AGCAGAAAGCTAGTAAGAAATGGTGGCCTGTTTTATCCAGTTATTGGGTTTGCACTGTTT
GTTACTTTTCTTTATTTGGCATTTGGAAACTTGTGGGGTTTCAATTTCAACAGAGAAGAA
ATAAAGTTAAGTTTTGTGGAGAGAAATGGAACTCAATTCTTTGTGGATGGTAAAGCTTTT
TATATAAATGGATGGAATTCTTACTGGTTAATGGACCATGCTGTGGATTATAGTAATAGA
CCAAGGATTAAAGGGATTTTACAAGCTGGTGCTAAGATGGGGCTCAGTGTGTGTAGAACT
TGGGCTTTTAATGATGGTGGATACAATGCTCTGCAGATTTCCCCTGGTAGATTTGATGAA
AGAGTGTTTAGAGCATTGGATCATGTTATTGCAGAAGCAAGAAAGAATGGCATTAGATTG
ATGCTTAGCTTGGTTAACAACCTGCACGCATTCGGGGGGAAGACAGAGTATGTGAAGTGG
GCAGAGAAAGAAGGTGTTGCTTTAAGCTCTTCCAACGATTCATTCTTTTATGACCCTACC
ATCCGTCGATATTTCAAAAATTATGTCAAGACAGTGCTAACTAGGAGAAACATATACACT
GGGATTGAGTACAGGGATGATCCTACTATCTTTGCATGGGAGTTAATAAACGAGCCTCGC
TGCATGACTGATCCTTCTGGTGACACACTTCAAGACTGGATAGAAGAGATGTCAACATTT
GTGAAGTCGATCGATAGGAAACATCTGCTTACGGTAGGCCTAGAAGGATTTTATGGCCGT
AAAAGTCCCAAAAGATCAACTGGCAATCCAGAATTTTGGGCTGCTGATCTTGGATCAGAT
TTCATACGCAACTCCATGCTCTCGACAATTGATTTTGCCTCTGTACATGTATATCCAGAC
CATTGGTTCCATGATAAAAATTTCGAAGAAAAACTAAAATTTGCAGCCAAATGGATGCTT
TCTCACATAGAAGACGGTGACAAGGAACTGAGAAAACCAATCATGTTCACTGAATTCGGT
TTGTCAAATGAGAACGAGGACTTTGAACCTGCTCAACGAGACAGATTCTACAAAATGGTT
CTTGATTTCATATACAAGTCTGCTAAAAGAAACAGGTCAGGTGCAGGATCATTCTTCTGG
CAGTTCTTGGTTGAAGGAATGGAACTGTATAATGATGATTTCGGAATTGTTCCATGGGAG
AGGCCTTCAACGTACGAGCTAATTACTGAACACTCATGTAGGCTCGCTAAAGAACACGGG
CTACTGCATACACAAATGGAACATTTGAAGGATTTTTGTGCATCGACGAGGTTATAAATC
ATGTATTGATCTTAGAGAAAGAAAGAAATTTGATGTATACAATGAAGAATCTGTTTGTGT
GTGTTTTTTCTTGTTTGAGATTTGTTATAGAGGGAGGAGCTGCAGGTTAGTTTTACACTG
TATTTTCTTTTCTTACTTCATAGATGTATACAAATTTGCATAAAGTAAATGTAGAGCAAA
TTTTTTTCTAAACTTTTTTCATTTGATAAACTTAATATTTAGGGGTTTTGGGCTATCCTC
CTCTCATCGAAGGCCAAAGAAACGCAATAATAATATAT