Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g008040.3.1
CDS Infomation

Late embryogenesis abundant protein-like (AHRD V3.3 *-* Q9LF88_ARATH)
Sequence

ATGGCTTCAGAACAAGTAAGAAGAAGAGAAGACAACGTTATTGATGAACAACATCAAATC
CAAATCAAGAGAACAAGAGACCCCAAAAGGGGTAGTGACACTGGTGCTGCTACTTCTGTG
AAAGTACAAGTTGGAAGTGGTGCTGGTGCAATTCATGTCACAAATGATTGTGATAAACAT
TCTTTTGAAGAGAGGCCAGGGGGTGTCAAGTTTGAAGTACATAGCCAGAGACACAAGGGT
AATGATAATGTCAAAGAATTGGCAAGTCATGGACAAAATGTAGTTCAATCAGCACAACAA
CCTAAAGATTATGCTAAAAACACAGCACCTGACAAGGGTGATCAAACATATGCTGCTGCC
ACAGACACCCTTTCAGGTGCTGGACAAACAGCAGCTCAATCAGCAAAGAAGTCTAAAAAC
ACAGTTCTTGACAAGGGTCAACAAGCTTATGCTGCTACTATAGACGCCCTTTCAAACACA
GGACAGACTGCAGCTCAATCAGCAAAGAAGGCTAAAGACACAGCTTTTGTGAAGGGCCAG
CAAGCTTATGATGCAACTACTGATACCCTTTCAAGCACAGGAAAAACAGCAGCTGAATCA
GCAAAAAAGGCTAAGGACACAGTTCTTTACAAGGGGCAGCAAGGTTATGGTGCTGCTACA
GATAACCTTTCAAGTGCTGGACAAACTGCAGCTCAATCTGCAAAGAAGGCCAAAGATTAT
GCTAAGGGGACAGTTTTTGATAAGGGTCAGCAAGCTTATGGTGCTACTACAGCTACCCTT
TCAACTGCTGGACAAAATGCAGCTCAATCTGCAAAGAAGGCTAAGGACACGGTTCTTGAC
AAGGGTCAGCAAGCTTATGCAGCTACTAAAGACACCCTTTCAAGCACAGGAAAAACTGCA
GTTCAATCAGCAAAGAATGCTAAAGAGACAACTTTTGAGAAGGGCCAGCAAGCTTATGGT
GCTACTACAGATACTCTTTCAAGTGCTGGACAAATTGCAGCTCAATCTGCAAAGACGGCT
AAGGACACAGTTCTTGATAAGGGTCAGCAAGCTTATGGTGCCACTACAAATACCCTTTCA
AGTGCTGGACAAACTGCAGCTCAATCTGCAAAGAAGACTAAGGACACAGTTCTTGATAAG
GGTCAGCAAGCTTATGCTGCAACTAAAGACACCCTTTCAAGTGCTGGACAAAATGCAGCT
CAATCTGCAAAGAAGGCTAAGGACACAGTTCTTGATAAGGGTCAGCAAGCTTATGCTGCA
ACTACAGATACCCTTTCAAGTGCTGGACAAACGACAGTTCAATCAACAAAGAATGCAGCA
GGTTATGTTGGGCAGAGAGCAGTAGAAGCGAAAGACATCACATTAGAAACAGGCAAAGGA
GTATTAGGATATGCAGGGGAAGTAGCCGAGATTGTGAAGGACAAAGCTGCAGTGTCTGGT
TGGGGAGCTGCACATTATACAGCAGAGAAAGCTGCAGAGGCCACAAAAGCTGTGGTTGGT
GTTGCTTCTAATGTTGCAGGGTACACCGAGGAAAAGGCGGTGGCCGCTAAGGATGCAGTT
GCTGACACTGGAATGAACATTGTAGGATATGCAGAGAACGAGTTGGCTGATGCTAAGGAC
TATGTGGTTTCAACTGAAGAAAGTGCAGCAGAGTATACAGCTAGGAAGAAAGCTGAAGCT
GAGAGGGAACTAGAAGCCAAAAGATCATACGACTTCAAGGGAGCAACTGGAAGTGAATTC
ATTAGAACTGAAGATTTTCAAGAATTTGAATCAGCAGGAGGAGAGGAAAACATGCAGCAG
GGAGGAGGACTATTGAAAGCAATTGGTGAAACTATAGTTGAGATAGGCAAGACAGCTACA
GATCTTATTGCTGGACGTGGACATGTAGAAGAATCAGTTAAGCATGGAGAAAAATAA

Peptide Sequence

PEP ID

Solyc10g008040.3.1
PEP Infomation

Late embryogenesis abundant protein-like (AHRD V3.3 *-* Q9LF88_ARATH)
Sequence

MASEQVRRREDNVIDEQHQIQIKRTRDPKRGSDTGAATSVKVQVGSGAGAIHVTNDCDKH
SFEERPGGVKFEVHSQRHKGNDNVKELASHGQNVVQSAQQPKDYAKNTAPDKGDQTYAAA
TDTLSGAGQTAAQSAKKSKNTVLDKGQQAYAATIDALSNTGQTAAQSAKKAKDTAFVKGQ
QAYDATTDTLSSTGKTAAESAKKAKDTVLYKGQQGYGAATDNLSSAGQTAAQSAKKAKDY
AKGTVFDKGQQAYGATTATLSTAGQNAAQSAKKAKDTVLDKGQQAYAATKDTLSSTGKTA
VQSAKNAKETTFEKGQQAYGATTDTLSSAGQIAAQSAKTAKDTVLDKGQQAYGATTNTLS
SAGQTAAQSAKKTKDTVLDKGQQAYAATKDTLSSAGQNAAQSAKKAKDTVLDKGQQAYAA
TTDTLSSAGQTTVQSTKNAAGYVGQRAVEAKDITLETGKGVLGYAGEVAEIVKDKAAVSG
WGAAHYTAEKAAEATKAVVGVASNVAGYTEEKAVAAKDAVADTGMNIVGYAENELADAKD
YVVSTEESAAEYTARKKAEAERELEAKRSYDFKGATGSEFIRTEDFQEFESAGGEENMQQ
GGGLLKAIGETIVEIGKTATDLIAGRGHVEESVKHGEK*

Transcript Sequence

Transcript ID

Solyc10g008040.3.1
Transcript Infomation

Late embryogenesis abundant protein-like (AHRD V3.3 *-* Q9LF88_ARATH)
Sequence

TGCTACGTAGACAAAATCAGTGAGTGACACGTTTGTAAAGTGATTGGTGACTAGTGAAGT
TTTCTCAAATCCACCATATCTCACCATGTGGCATGACACAAAACTCAACACTCACCACTA
ATTGAACCACTTGTCAACAACCTACACCCTCTATGCTTCTCTTTTTATACACTCTTTCAT
CACTCACATTTCAACACAAAATCTTTCCAAAGTCAAAATCAAAATTATCAAAGTTTACTA
CCTCTTTTTTGGTTACTATATACCACCAACACCAATGGCTTCAGAACAAGTAAGAAGAAG
AGAAGACAACGTTATTGATGAACAACATCAAATCCAAATCAAGAGAACAAGAGACCCCAA
AAGGGGTAGTGACACTGGTGCTGCTACTTCTGTGAAAGTACAAGTTGGAAGTGGTGCTGG
TGCAATTCATGTCACAAATGATTGTGATAAACATTCTTTTGAAGAGAGGCCAGGGGGTGT
CAAGTTTGAAGTACATAGCCAGAGACACAAGGGTAATGATAATGTCAAAGAATTGGCAAG
TCATGGACAAAATGTAGTTCAATCAGCACAACAACCTAAAGATTATGCTAAAAACACAGC
ACCTGACAAGGGTGATCAAACATATGCTGCTGCCACAGACACCCTTTCAGGTGCTGGACA
AACAGCAGCTCAATCAGCAAAGAAGTCTAAAAACACAGTTCTTGACAAGGGTCAACAAGC
TTATGCTGCTACTATAGACGCCCTTTCAAACACAGGACAGACTGCAGCTCAATCAGCAAA
GAAGGCTAAAGACACAGCTTTTGTGAAGGGCCAGCAAGCTTATGATGCAACTACTGATAC
CCTTTCAAGCACAGGAAAAACAGCAGCTGAATCAGCAAAAAAGGCTAAGGACACAGTTCT
TTACAAGGGGCAGCAAGGTTATGGTGCTGCTACAGATAACCTTTCAAGTGCTGGACAAAC
TGCAGCTCAATCTGCAAAGAAGGCCAAAGATTATGCTAAGGGGACAGTTTTTGATAAGGG
TCAGCAAGCTTATGGTGCTACTACAGCTACCCTTTCAACTGCTGGACAAAATGCAGCTCA
ATCTGCAAAGAAGGCTAAGGACACGGTTCTTGACAAGGGTCAGCAAGCTTATGCAGCTAC
TAAAGACACCCTTTCAAGCACAGGAAAAACTGCAGTTCAATCAGCAAAGAATGCTAAAGA
GACAACTTTTGAGAAGGGCCAGCAAGCTTATGGTGCTACTACAGATACTCTTTCAAGTGC
TGGACAAATTGCAGCTCAATCTGCAAAGACGGCTAAGGACACAGTTCTTGATAAGGGTCA
GCAAGCTTATGGTGCCACTACAAATACCCTTTCAAGTGCTGGACAAACTGCAGCTCAATC
TGCAAAGAAGACTAAGGACACAGTTCTTGATAAGGGTCAGCAAGCTTATGCTGCAACTAA
AGACACCCTTTCAAGTGCTGGACAAAATGCAGCTCAATCTGCAAAGAAGGCTAAGGACAC
AGTTCTTGATAAGGGTCAGCAAGCTTATGCTGCAACTACAGATACCCTTTCAAGTGCTGG
ACAAACGACAGTTCAATCAACAAAGAATGCAGCAGGTTATGTTGGGCAGAGAGCAGTAGA
AGCGAAAGACATCACATTAGAAACAGGCAAAGGAGTATTAGGATATGCAGGGGAAGTAGC
CGAGATTGTGAAGGACAAAGCTGCAGTGTCTGGTTGGGGAGCTGCACATTATACAGCAGA
GAAAGCTGCAGAGGCCACAAAAGCTGTGGTTGGTGTTGCTTCTAATGTTGCAGGGTACAC
CGAGGAAAAGGCGGTGGCCGCTAAGGATGCAGTTGCTGACACTGGAATGAACATTGTAGG
ATATGCAGAGAACGAGTTGGCTGATGCTAAGGACTATGTGGTTTCAACTGAAGAAAGTGC
AGCAGAGTATACAGCTAGGAAGAAAGCTGAAGCTGAGAGGGAACTAGAAGCCAAAAGATC
ATACGACTTCAAGGGAGCAACTGGAAGTGAATTCATTAGAACTGAAGATTTTCAAGAATT
TGAATCAGCAGGAGGAGAGGAAAACATGCAGCAGGGAGGAGGACTATTGAAAGCAATTGG
TGAAACTATAGTTGAGATAGGCAAGACAGCTACAGATCTTATTGCTGGACGTGGACATGT
AGAAGAATCAGTTAAGCATGGAGAAAAATAAACATCAGTCACAACAGAAATTTTGTGCAT
TTAGAGCACAGCTTTGTTCTTTGTCTCAAGTGTTTTTAAGTTCAAACCAGAATGCTTTTG
TGCATCACCTTTCTAGGGGCTAATTTTTTAAGGCCCTGGAACTTGTTTTTGTGATATCTA
GCAAAGATAAAAATAGCTAGTATCCTCTTCTTTTTTGTGCTGGATCATCTTAAGTTTGTT
CATCAATTAAAAAAAATCAAATATAAGAAACTTTATTCTTATCAAGAACAACAATAAAAA
AAAGAGTCAAAATACATAAGAGTTAATATC