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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g008030.3.1
CDS Infomation

Trichome birefringence-like protein (AHRD V3.3 *** G7IKB9_MEDTR)
Sequence

ATGGAATTTTTGTTACTCTCTCTATTCTTGATATTTTTTGTAAGAATAAATAATTATGTG
AATGCTACTAATAATTATTCTATAGATGCAATTAGCAATATTGGGTGCAATATTTTTGTT
GGAAAATGGGTTTTTGATTCTTCATATCCTATGTATGATTTCTCAAAATGTCCATTTATT
GATAATGAATTTAATTGCCAGAAGTACAAGAGGCCTGATAATTTGTACCTCAAATATAGA
TGGCAACCTTCCTCTTGCAACCTCCCAAGGTTCAATGGTTTGGTTTTCTTGGAAAAATAC
AAGGGGAAGAATATAATGTTTGTGGGTGACTCATTAAGTTTGAATATGTGGGAGTCATTG
GGTTGCATGATTCACTCTTCATTGCCAAATGCTAAAACTTCACTCACAAAGAAAAATGGA
ATTGCTGAAATTGCATTCTTGGACTATGGAGTTAGATTGTCAATGTATCGTACTCCATAC
TTGGTGGACATGGTCAAAGAAAAAATTGGCACTGTTTTGAAGTTGGATTCTATTACTGAT
GGCAAGGCTTGGGTGGGAATGGATGTATTGATATTCAATTCATGGCATTGGTGGACTCAC
ACTGGCAGCTCTCAACCGTGGGATTACATCCAATACAGGGGCAAAATAGTCAAAGATATG
GACCGTTTTGTTGCTTTTTTTAAAGGAATGACCACTTGGGCTAGATGGGTCGATAAAAAT
ATCGACCCATCTAAAACTAAAGTCTTCTTTCAAGGAATTTCACCCACTCACTATAAGGGC
AAGGATTGGAATGAACCATCAAAATCATGCAAAGGACAAACACAACCATTTTTTGGCACA
AATTATCCAGCAGGGACACCACAAGAAGCAAATGTGGTCAACAAAGTAATCAAAAACATT
AAAAACAAAGTTTATTTATTGGATATTACAACTCTTTCACAATATAGAAAAGATGGACAT
CCAGGATATTATAGTGATATACATGGATCAGATTGTAGCCATTGGTGTCTACCTGGTTTG
CCTGATACTTGGAACCTACTTCTTTATACAATTCTTATTGGTTGA

Peptide Sequence

PEP ID

Solyc10g008030.3.1
PEP Infomation

Trichome birefringence-like protein (AHRD V3.3 *** G7IKB9_MEDTR)
Sequence

MEFLLLSLFLIFFVRINNYVNATNNYSIDAISNIGCNIFVGKWVFDSSYPMYDFSKCPFI
DNEFNCQKYKRPDNLYLKYRWQPSSCNLPRFNGLVFLEKYKGKNIMFVGDSLSLNMWESL
GCMIHSSLPNAKTSLTKKNGIAEIAFLDYGVRLSMYRTPYLVDMVKEKIGTVLKLDSITD
GKAWVGMDVLIFNSWHWWTHTGSSQPWDYIQYRGKIVKDMDRFVAFFKGMTTWARWVDKN
IDPSKTKVFFQGISPTHYKGKDWNEPSKSCKGQTQPFFGTNYPAGTPQEANVVNKVIKNI
KNKVYLLDITTLSQYRKDGHPGYYSDIHGSDCSHWCLPGLPDTWNLLLYTILIG*

Transcript Sequence

Transcript ID

Solyc10g008030.3.1
Transcript Infomation

Trichome birefringence-like protein (AHRD V3.3 *** G7IKB9_MEDTR)
Sequence

ATATATTATATATATTTAGTACATCATCCTATTCTTCCCACTTCACAAATTATACAAATT
GCTATCTTTTTAAGATGGAATTTTTGTTACTCTCTCTATTCTTGATATTTTTTGTAAGAA
TAAATAATTATGTGAATGCTACTAATAATTATTCTATAGATGCAATTAGCAATATTGGGT
GCAATATTTTTGTTGGAAAATGGGTTTTTGATTCTTCATATCCTATGTATGATTTCTCAA
AATGTCCATTTATTGATAATGAATTTAATTGCCAGAAGTACAAGAGGCCTGATAATTTGT
ACCTCAAATATAGATGGCAACCTTCCTCTTGCAACCTCCCAAGGTTCAATGGTTTGGTTT
TCTTGGAAAAATACAAGGGGAAGAATATAATGTTTGTGGGTGACTCATTAAGTTTGAATA
TGTGGGAGTCATTGGGTTGCATGATTCACTCTTCATTGCCAAATGCTAAAACTTCACTCA
CAAAGAAAAATGGAATTGCTGAAATTGCATTCTTGGACTATGGAGTTAGATTGTCAATGT
ATCGTACTCCATACTTGGTGGACATGGTCAAAGAAAAAATTGGCACTGTTTTGAAGTTGG
ATTCTATTACTGATGGCAAGGCTTGGGTGGGAATGGATGTATTGATATTCAATTCATGGC
ATTGGTGGACTCACACTGGCAGCTCTCAACCGTGGGATTACATCCAATACAGGGGCAAAA
TAGTCAAAGATATGGACCGTTTTGTTGCTTTTTTTAAAGGAATGACCACTTGGGCTAGAT
GGGTCGATAAAAATATCGACCCATCTAAAACTAAAGTCTTCTTTCAAGGAATTTCACCCA
CTCACTATAAGGGCAAGGATTGGAATGAACCATCAAAATCATGCAAAGGACAAACACAAC
CATTTTTTGGCACAAATTATCCAGCAGGGACACCACAAGAAGCAAATGTGGTCAACAAAG
TAATCAAAAACATTAAAAACAAAGTTTATTTATTGGATATTACAACTCTTTCACAATATA
GAAAAGATGGACATCCAGGATATTATAGTGATATACATGGATCAGATTGTAGCCATTGGT
GTCTACCTGGTTTGCCTGATACTTGGAACCTACTTCTTTATACAATTCTTATTGGTTGAA
ATCGCGGCGACACGAACAACCCTTTTAGTCGCCACAAAAAATATGGTTTTTCGTGGCAAC
TTTGAAAGTTTTGTCACGAAAAATAAAATGATTTGAGATAGTCTAATCGCTAAAACTTAT
TGATGGTGACCCCGAAAAATAAAATGATTTGAGATAGTCTAATCGCTAAAACTTATTGAT
GGTGACCCCTAAAGTTTGCATAGAAATGTTATTCTTTAAGGGTCGTCGCGAATAAATTTC
TAACAATAAAACTATTGTAAGTGGCATTCAAGTAGTCACGAAAAGTCCTTTGTAGAGTTT
TGTGGTGACAAAGTCGTCACAAAAAGTAATTTATTCTAGTATATATATATATATGATCAT
TATTCTATTTTACTAGGAAGATGTATGTTGTTTAGGAATTTGATTCACTTTTATTTGAAT
GACAAAATAAGAATTTTCATATTTGAATTGTAAAATGTTGTATAAGATCTATAGGCATGA
AAAGTTGCCTTAGTCCAAATTGTTTTTTAAGATAAATAATAGGGTATAACACAATGAGCT
C