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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g008020.3.1
CDS Infomation

CMV 1a interacting protein 1 (AHRD V3.3 *** Q5DT22_TOBAC)
Sequence

AACTGCTCTGTTTCAAGAACTGCAAAAATGGCTTTCAGCTTCAAGCTTAACACTTCAAAT
CCCAGTTTCTTCACCATTACCAACAATTCAATCCATGACCCATTACTGAAAATTGCAGCA
AAAAGACGAATTTTGGGTTTTAAACTCTCTGCTTCTTCTTCTTCTTCTTCGAGTAGTAGT
AGTAGTAGTAGTAGAAGTGCAGAGGTATTTGAAGAAGGACAACTTGAAAGACCTCGATGG
TCAGGGGAAACTCCACTTTCACGTCTTGTTGGAACTCTCATTTCCATCAAACCTCTATTT
TCTATACTCAAACTCGGTGCTAGACAGGTTTTCATAAGTACAGCTGAGAAAACTAATATT
CCATGGACAGAGATGACAAAGGAGATACTGAATTCGGATGTTTACAAAGAGTTGGAGAGC
ATTGAGAATCCTGCTATTGTCTACCCTGATTATTATCTCAATCCTTTCCACGCGTATGAT
GAGGGGAACCTGTCCTGGCTGGCTGCAGCTGAAGCAGACGCCGCAACTATGTCAATGGTG
AGACGTGCAATTCCTAATGCATCTTCACTTGATGAAGCAAACCAGATAGTCCGCGGAAAT
TGGCTTGATGCAATAGAAAAACATCATCAGCAATATTCAGCAGATTTCTCAATCAGAGAC
ATTCTTGACATTGGATGCTCGGTTGGTGTGAGCACTGGATACCTTGCAGACAGATTTCCT
TCTGCTAAAGTGACTGGTTTGGATCTTTCACCTTATTTTCTTTCTGTTGCTCAATATAAA
GAAAAGAAAAGAAACCAGAGAAAGAATCCTATCAGCTGGATACATGCAAACGGTGAAAAC
ACTGGCTTGCCTTCCGAATCATTTGATCTCGTTTCAATTCCTTATGTGTTTCATGAATGT
CCTGAAAGAGCAATAAGAAATATAGTGAAAGAGTCATTTCGTTTGCTTCGACCTGGAGGA
ACTGTTGCTATAACTGATAACTCGCCAAAGTCGAAGATTCTTCAGGAATTACCACCAGTG
CTGTTTACATTGATGAAGAGCACAGAACCTTTTCTGGATGAATACTATCTGACTGATCTT
GAAAGAGTGATCAAGGAAACTGGTTTTGCTAATGTACAAACTGTTCTCACTGATCCCAGA
CACAGAACCGTTACTGCCACCGTCCCTTACTAA

Peptide Sequence

PEP ID

Solyc10g008020.3.1
PEP Infomation

CMV 1a interacting protein 1 (AHRD V3.3 *** Q5DT22_TOBAC)
Sequence

NCSVSRTAKMAFSFKLNTSNPSFFTITNNSIHDPLLKIAAKRRILGFKLSASSSSSSSSS
SSSSRSAEVFEEGQLERPRWSGETPLSRLVGTLISIKPLFSILKLGARQVFISTAEKTNI
PWTEMTKEILNSDVYKELESIENPAIVYPDYYLNPFHAYDEGNLSWLAAAEADAATMSMV
RRAIPNASSLDEANQIVRGNWLDAIEKHHQQYSADFSIRDILDIGCSVGVSTGYLADRFP
SAKVTGLDLSPYFLSVAQYKEKKRNQRKNPISWIHANGENTGLPSESFDLVSIPYVFHEC
PERAIRNIVKESFRLLRPGGTVAITDNSPKSKILQELPPVLFTLMKSTEPFLDEYYLTDL
ERVIKETGFANVQTVLTDPRHRTVTATVPY*

Transcript Sequence

Transcript ID

Solyc10g008020.3.1
Transcript Infomation

CMV 1a interacting protein 1 (AHRD V3.3 *** Q5DT22_TOBAC)
Sequence

AACTGCTCTGTTTCAAGAACTGCAAAAATGGCTTTCAGCTTCAAGCTTAACACTTCAAAT
CCCAGTTTCTTCACCATTACCAACAATTCAATCCATGACCCATTACTGAAAATTGCAGCA
AAAAGACGAATTTTGGGTTTTAAACTCTCTGCTTCTTCTTCTTCTTCTTCGAGTAGTAGT
AGTAGTAGTAGTAGAAGTGCAGAGGTATTTGAAGAAGGACAACTTGAAAGACCTCGATGG
TCAGGGGAAACTCCACTTTCACGTCTTGTTGGAACTCTCATTTCCATCAAACCTCTATTT
TCTATACTCAAACTCGGTGCTAGACAGGTTTTCATAAGTACAGCTGAGAAAACTAATATT
CCATGGACAGAGATGACAAAGGAGATACTGAATTCGGATGTTTACAAAGAGTTGGAGAGC
ATTGAGAATCCTGCTATTGTCTACCCTGATTATTATCTCAATCCTTTCCACGCGTATGAT
GAGGGGAACCTGTCCTGGCTGGCTGCAGCTGAAGCAGACGCCGCAACTATGTCAATGGTG
AGACGTGCAATTCCTAATGCATCTTCACTTGATGAAGCAAACCAGATAGTCCGCGGAAAT
TGGCTTGATGCAATAGAAAAACATCATCAGCAATATTCAGCAGATTTCTCAATCAGAGAC
ATTCTTGACATTGGATGCTCGGTTGGTGTGAGCACTGGATACCTTGCAGACAGATTTCCT
TCTGCTAAAGTGACTGGTTTGGATCTTTCACCTTATTTTCTTTCTGTTGCTCAATATAAA
GAAAAGAAAAGAAACCAGAGAAAGAATCCTATCAGCTGGATACATGCAAACGGTGAAAAC
ACTGGCTTGCCTTCCGAATCATTTGATCTCGTTTCAATTCCTTATGTGTTTCATGAATGT
CCTGAAAGAGCAATAAGAAATATAGTGAAAGAGTCATTTCGTTTGCTTCGACCTGGAGGA
ACTGTTGCTATAACTGATAACTCGCCAAAGTCGAAGATTCTTCAGGAATTACCACCAGTG
CTGTTTACATTGATGAAGAGCACAGAACCTTTTCTGGATGAATACTATCTGACTGATCTT
GAAAGAGTGATCAAGGAAACTGGTTTTGCTAATGTACAAACTGTTCTCACTGATCCCAGA
CACAGAACCGTTACTGCCACCGTCCCTTACTAACATTCTCCACCTTACACATGTTTTCGC
AAACAACCTTTCTATCTCCACGAGGTACGACTAAGCTCTACGTATACTCTATCCTCTCCA
GATCCCACTTGCGGGAATCCACTGGGTAAGTTGTTAGTTGTTGTTGTTGCTGAGACTTGT
TCAGGCCCAGGAAATTGTGAGGGAAAACATAGATAATCTGTAAAGTTGGAACTGATATTT
CTTTTCAGAAGAAAAGAATTAAAAATGCAGAAAATTTAATTAGTGCTAGTGAACATGAGA
TTGCATGTTTTTTTTTAAT