Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g007960.1.1
CDS Infomation

Allene oxide synthase (AHRD V3.3 *** Q5NDE2_SOLTU)
Sequence

ATGGCTAATACCAAAGACTCATACCACATAATTACAATGGATACCAAAGAATCTTCAATT
CCAAGTCTTCCTATGAAAGAAATTCCTGGTGATTATGGTGTCCCATTCTTCGGGGCGATA
AAAGATCGTTACGATTTTCATTACAATCAAGGTGCTGATGAATTTTTCAGGTCTCGCATG
AAAAAGTACGATTCCACTGTCTTTAGAACCAATGTCCCTCCTGGTCCTTTCAATGCTCGT
AACTCTAAAGTTGTTGTCCTTGTAGACGCGGTTAGTTATCCCATCCTTTTCGATAACTCC
CAAGTCGACAAGGAAAACTACTTTGAAGGTACTTTTATGTCCTCTCCATCTTTCAATGGT
GGTTATAAGGTTTGTGGTTTTCTTGGTACTAGTGACCCTAAACACACCACTCTAAAAGGT
CTTTTCTTGTCCACACTAACTAGATTGCATGACAAGTTCATCCCTATCTTTACTACATCA
ATCACTTCAATGTTTACCAGTCTTGAAAAAGAACTGTCTGAGAAAGGAACGTCTTACTTC
AATCCCATCGGTGACAACTTGTCATTCGAATTCCTCTTTCGATTGTTTTGTGAAGGGAAA
AATCCAATTGATACAAGTGTTGGCCCTAATGGACCAAAAATTGTAGACAAATGGGTTTTT
CTTCAACTAGCTCCATTGATTTCACTAGGGCTTAAATTTGTACCAAACTTTCTTGAAGAT
TTAGTCTTGCACACTTTCCCTCTACCTTACATCCTTGTAAAACGCGATCATCAGAAGCTA
TACAACGCGTTCTACAACTCCATGAAGGATATCTTAGATGAAGCTGAGAAACTTGGAGTT
AAAAGAGATGAAGCTTGTCATAACTTTGTTTTCCTAGCAGGATTCAATTCGTATGGCGGT
TTGAAAGTGTTCTTCCCATCTTTGATCAAATGGATAGGTACATCAGGACCTAGTTTACAT
GCTAGGCTTGTTAAAGAGATCAGGACCGCGGTTAAAGAGGCTGGAGGGGTAACTCTTTCA
GCTATAGATAAAATGCCTCTTGTTAAGTCTGTGGTTTATGAAACCCTAAGGATGGATCCT
CCGGTTCCATTCCAAACCGTTAAGGCTAGGAAGAATATAATCATTACTAATCACGAATCA
TCGTTCTTGATCAAGAAAGATGAATTGATATTTGGATATCAACCCTTAGCTACAAAGGAT
TCAAAAGTATTTAAGAACGCGGAGGAGTTCAATCCAGATAGATTTGTGGGGGGTGGAGAG
AAGTTGCTTAAGTATGTGTATTGGTCAAATGGTAAAGAGATTGATAATCCAAGTGTGAAT
GATAAACAATGTCCTGGTAAAGATTTGATAGTGTTGATGGGAAGGTTATTGGTTGTGGAG
TTTTTCATGCGTTATGATACTTTTGAAGTTGAATTTGGAAAACTTTTGCTTGGTTCAAAG
GTGACTTTTAAGTCATTAACTAAAGCAACATCATGA

Peptide Sequence

PEP ID

Solyc10g007960.1.1
PEP Infomation

Allene oxide synthase (AHRD V3.3 *** Q5NDE2_SOLTU)
Sequence

MANTKDSYHIITMDTKESSIPSLPMKEIPGDYGVPFFGAIKDRYDFHYNQGADEFFRSRM
KKYDSTVFRTNVPPGPFNARNSKVVVLVDAVSYPILFDNSQVDKENYFEGTFMSSPSFNG
GYKVCGFLGTSDPKHTTLKGLFLSTLTRLHDKFIPIFTTSITSMFTSLEKELSEKGTSYF
NPIGDNLSFEFLFRLFCEGKNPIDTSVGPNGPKIVDKWVFLQLAPLISLGLKFVPNFLED
LVLHTFPLPYILVKRDHQKLYNAFYNSMKDILDEAEKLGVKRDEACHNFVFLAGFNSYGG
LKVFFPSLIKWIGTSGPSLHARLVKEIRTAVKEAGGVTLSAIDKMPLVKSVVYETLRMDP
PVPFQTVKARKNIIITNHESSFLIKKDELIFGYQPLATKDSKVFKNAEEFNPDRFVGGGE
KLLKYVYWSNGKEIDNPSVNDKQCPGKDLIVLMGRLLVVEFFMRYDTFEVEFGKLLLGSK
VTFKSLTKATS*

Transcript Sequence

Transcript ID

Solyc10g007960.1.1
Transcript Infomation

Allene oxide synthase (AHRD V3.3 *** Q5NDE2_SOLTU)
Sequence

ATGGCTAATACCAAAGACTCATACCACATAATTACAATGGATACCAAAGAATCTTCAATT
CCAAGTCTTCCTATGAAAGAAATTCCTGGTGATTATGGTGTCCCATTCTTCGGGGCGATA
AAAGATCGTTACGATTTTCATTACAATCAAGGTGCTGATGAATTTTTCAGGTCTCGCATG
AAAAAGTACGATTCCACTGTCTTTAGAACCAATGTCCCTCCTGGTCCTTTCAATGCTCGT
AACTCTAAAGTTGTTGTCCTTGTAGACGCGGTTAGTTATCCCATCCTTTTCGATAACTCC
CAAGTCGACAAGGAAAACTACTTTGAAGGTACTTTTATGTCCTCTCCATCTTTCAATGGT
GGTTATAAGGTTTGTGGTTTTCTTGGTACTAGTGACCCTAAACACACCACTCTAAAAGGT
CTTTTCTTGTCCACACTAACTAGATTGCATGACAAGTTCATCCCTATCTTTACTACATCA
ATCACTTCAATGTTTACCAGTCTTGAAAAAGAACTGTCTGAGAAAGGAACGTCTTACTTC
AATCCCATCGGTGACAACTTGTCATTCGAATTCCTCTTTCGATTGTTTTGTGAAGGGAAA
AATCCAATTGATACAAGTGTTGGCCCTAATGGACCAAAAATTGTAGACAAATGGGTTTTT
CTTCAACTAGCTCCATTGATTTCACTAGGGCTTAAATTTGTACCAAACTTTCTTGAAGAT
TTAGTCTTGCACACTTTCCCTCTACCTTACATCCTTGTAAAACGCGATCATCAGAAGCTA
TACAACGCGTTCTACAACTCCATGAAGGATATCTTAGATGAAGCTGAGAAACTTGGAGTT
AAAAGAGATGAAGCTTGTCATAACTTTGTTTTCCTAGCAGGATTCAATTCGTATGGCGGT
TTGAAAGTGTTCTTCCCATCTTTGATCAAATGGATAGGTACATCAGGACCTAGTTTACAT
GCTAGGCTTGTTAAAGAGATCAGGACCGCGGTTAAAGAGGCTGGAGGGGTAACTCTTTCA
GCTATAGATAAAATGCCTCTTGTTAAGTCTGTGGTTTATGAAACCCTAAGGATGGATCCT
CCGGTTCCATTCCAAACCGTTAAGGCTAGGAAGAATATAATCATTACTAATCACGAATCA
TCGTTCTTGATCAAGAAAGATGAATTGATATTTGGATATCAACCCTTAGCTACAAAGGAT
TCAAAAGTATTTAAGAACGCGGAGGAGTTCAATCCAGATAGATTTGTGGGGGGTGGAGAG
AAGTTGCTTAAGTATGTGTATTGGTCAAATGGTAAAGAGATTGATAATCCAAGTGTGAAT
GATAAACAATGTCCTGGTAAAGATTTGATAGTGTTGATGGGAAGGTTATTGGTTGTGGAG
TTTTTCATGCGTTATGATACTTTTGAAGTTGAATTTGGAAAACTTTTGCTTGGTTCAAAG
GTGACTTTTAAGTCATTAACTAAAGCAACATCATGA