Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g007340.3.1
CDS Infomation

Methylthioribose-1-phosphate isomerase (AHRD V3.3 *-* A0A0B0PHV1_GOSAR)
Sequence

ATGTCACGTTTTCCGGTGATTCCTTACGATGAGCAGAGATTGATAGAAGAAGTTCACTAC
CTCCATTCTTTATGGCATCAAGGTCCCCCCCAGCCCCACCCCCATGTCCACCCTAATCTG
CACCCCCAAACCCCAGTGAGTCTACAACCCTCCGGTTCTACTCAGTTCAAGAAAAGAAAT
AAGCAGAAATCCAAAAGGCTGAAGGAAGCTATAGTAGATTCTGGTGTTGAATGGGTGTGT
CCATCTCCTGCTGAATCGAATCCGGTCACTGAATCCGGCTGGCCCAGTTTCACTGCACAA
CCAAAATCGCGACCCCATTTGCCCACTGCTGAAGAATTGGCTAGTGTTGCTGGGAACCGG
GCTCAGCAACAGGCATTGAAGGCGGTATCGGAGTATTTGAAGTACTCAATTGATGATGAG
GAGGAGGATATGTATGAAGATGAAGATGAGGATGATATGGAAGTGGACAAGGGGGAGAAA
AATTTGAACTTTTTCGCGAAGTTGTTTGAGGAGAATGATGGATTGAGAGAGTATTATGAG
AAGAATAGTGAAAATGGTGGGGGATTTATTTGTCTTGTGTGTAGTGGGGTTGGTAAGAAA
GGGTGGAGGAAGAGGTTTAAGGATTGTGTGGGTCTTGTTCAGCATTCGATTACTATATCG
AACAAGAGGCAGACACATAGGGCTTATGGTCAGGTCATTTGTCGAATTCTTGGATGGGAT
ATTAATAGGCTTCCATCCATTGTTTTGTCCGCTGGTGGTAAGCCTAGTGAATCTTCTGAT
AAACCGGTGGAGGCTCAGGGGAATAAGGATGCTGGTGGTAAAGATGATACGAGTGGTCTA
AGCAATACAACAGATGCTGTAAATATTGGCAGTGATGAATTATCTCAACAAAAACAGTCT
TTTAGTAATGAAAACCAACAAGAAAATGGTGGTGGCTCCAGAAAATTAGAGAACAACTCC
CTAATTGAAGCCAATATAAGCAAAGTGATTCCTGAAACAACAAAGGAGAACACAGAGGGT
GTATCCAATTGTACGGGGAATGAGGGTGATGGTGGTAAGAACAGTTTGAGTGGTCAAAGC
AATACCAGAGATACTGTAAATATTGGCAGTAGTGAGTTATCTCAGCAAAACAGGTCTTCC
GGTGATGAAAACCAGCCAGAAAATGGTGGTTTCTCCACAACGTTAGAGTCCACAAGTGAA
ACCAATGCAAATGAAGATGTTAGCAATGATATACCCGAAACAGCAAAAAAGAACGCAGAT
GGTGCATCCAATTGTCTGGAACCATTGCCAGATGATATCATTGTTGCAAATGAAGAAAAC
AATGATGTTTCAAAAGAGATAACAATCGTCAGCGAGGAGAGTTGA

Peptide Sequence

PEP ID

Solyc10g007340.3.1
PEP Infomation

Methylthioribose-1-phosphate isomerase (AHRD V3.3 *-* A0A0B0PHV1_GOSAR)
Sequence

MSRFPVIPYDEQRLIEEVHYLHSLWHQGPPQPHPHVHPNLHPQTPVSLQPSGSTQFKKRN
KQKSKRLKEAIVDSGVEWVCPSPAESNPVTESGWPSFTAQPKSRPHLPTAEELASVAGNR
AQQQALKAVSEYLKYSIDDEEEDMYEDEDEDDMEVDKGEKNLNFFAKLFEENDGLREYYE
KNSENGGGFICLVCSGVGKKGWRKRFKDCVGLVQHSITISNKRQTHRAYGQVICRILGWD
INRLPSIVLSAGGKPSESSDKPVEAQGNKDAGGKDDTSGLSNTTDAVNIGSDELSQQKQS
FSNENQQENGGGSRKLENNSLIEANISKVIPETTKENTEGVSNCTGNEGDGGKNSLSGQS
NTRDTVNIGSSELSQQNRSSGDENQPENGGFSTTLESTSETNANEDVSNDIPETAKKNAD
GASNCLEPLPDDIIVANEENNDVSKEITIVSEES*

Transcript Sequence

Transcript ID

Solyc10g007340.3.1
Transcript Infomation

Methylthioribose-1-phosphate isomerase (AHRD V3.3 *-* A0A0B0PHV1_GOSAR)
Sequence

AATATTCAATATTTTTGACAAATCGAATCTGAAAAAAAGAGCATCCCGAAATCCCTTTCT
CAGTTCCCGGTTTCTGCCGCCAAGAAACCATTTTTCTTCACCGGAATCGGAGATATCGCT
CTGAGCCTTTCATTTTCCGGCGATTCCCCGGCATTTAAACAGTAGCAACCAAAGCCCTTC
TGCTCAAATAGTCAAGAATGTCACGTTTTCCGGTGATTCCTTACGATGAGCAGAGATTGA
TAGAAGAAGTTCACTACCTCCATTCTTTATGGCATCAAGGTCCCCCCCAGCCCCACCCCC
ATGTCCACCCTAATCTGCACCCCCAAACCCCAGTGAGTCTACAACCCTCCGGTTCTACTC
AGTTCAAGAAAAGAAATAAGCAGAAATCCAAAAGGCTGAAGGAAGCTATAGTAGATTCTG
GTGTTGAATGGGTGTGTCCATCTCCTGCTGAATCGAATCCGGTCACTGAATCCGGCTGGC
CCAGTTTCACTGCACAACCAAAATCGCGACCCCATTTGCCCACTGCTGAAGAATTGGCTA
GTGTTGCTGGGAACCGGGCTCAGCAACAGGCATTGAAGGCGGTATCGGAGTATTTGAAGT
ACTCAATTGATGATGAGGAGGAGGATATGTATGAAGATGAAGATGAGGATGATATGGAAG
TGGACAAGGGGGAGAAAAATTTGAACTTTTTCGCGAAGTTGTTTGAGGAGAATGATGGAT
TGAGAGAGTATTATGAGAAGAATAGTGAAAATGGTGGGGGATTTATTTGTCTTGTGTGTA
GTGGGGTTGGTAAGAAAGGGTGGAGGAAGAGGTTTAAGGATTGTGTGGGTCTTGTTCAGC
ATTCGATTACTATATCGAACAAGAGGCAGACACATAGGGCTTATGGTCAGGTCATTTGTC
GAATTCTTGGATGGGATATTAATAGGCTTCCATCCATTGTTTTGTCCGCTGGTGGTAAGC
CTAGTGAATCTTCTGATAAACCGGTGGAGGCTCAGGGGAATAAGGATGCTGGTGGTAAAG
ATGATACGAGTGGTCTAAGCAATACAACAGATGCTGTAAATATTGGCAGTGATGAATTAT
CTCAACAAAAACAGTCTTTTAGTAATGAAAACCAACAAGAAAATGGTGGTGGCTCCAGAA
AATTAGAGAACAACTCCCTAATTGAAGCCAATATAAGCAAAGTGATTCCTGAAACAACAA
AGGAGAACACAGAGGGTGTATCCAATTGTACGGGGAATGAGGGTGATGGTGGTAAGAACA
GTTTGAGTGGTCAAAGCAATACCAGAGATACTGTAAATATTGGCAGTAGTGAGTTATCTC
AGCAAAACAGGTCTTCCGGTGATGAAAACCAGCCAGAAAATGGTGGTTTCTCCACAACGT
TAGAGTCCACAAGTGAAACCAATGCAAATGAAGATGTTAGCAATGATATACCCGAAACAG
CAAAAAAGAACGCAGATGGTGCATCCAATTGTCTGGAACCATTGCCAGATGATATCATTG
TTGCAAATGAAGAAAACAATGATGTTTCAAAAGAGATAACAATCGTCAGCGAGGAGAGTT
GAATGTTGATGGACTTATTATTCAAGAAGTTTGAGAATGCAACGTGAAACAGCTCATGCT
TTCGAGAGCTCCCGTTCCAGGAGATCATCTCCTTCATTATAATGATTAGTATATGATTGA
GGGAAAATCTATAAGTTAGTGATATAGGTGAAATTAGTTTGTATGAGAAGACATAACTTT
AAAACTGATGATACCTTAGTGATTTGTCTGTATTGTATGTATGAAATTGAGAAGATGCAC
TCATCAGTGGCTGTGCTGTTGAGAAAGTTTTTATACTTGGGAGGCCTATGCTTTAGTTAT
TATCTTTTCGCCCCATGTTTTATTTACAACTATGATGGTTGAGGCTTGTACGTTTCTCGA
TTAATTTCACAAAATATGTGTGAATCTCCTG