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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g007320.3.1
CDS Infomation

Uroporphyrinogen decarboxylase (AHRD V3.3 *** K4CXR1_SOLLC)
Sequence

ATGGCTATGGCTTTTTCTCCATTAACAACAAGTGGGTGTAGTAGTTATTGCAATCTTGGA
TTAAGCTGGAAATCATCGAGCTTGTTTGTGGAATTAGGGTTTGTTTCAAATGGGTCAAAA
GGGGTTTCTGCTAAACCCGCAAAGCTCAATGCTAGTAAAGTTTTTCGGGCATGTGCTTCT
TCTTCTAACTCTGATCCTCTTTTGGTGAAGGCTGCAAGAAGAGAACGGGTGAGTCGCCCA
CCCGCTTGGATGATGCGTCAAGCGGGAAGGTATATGGCTGTTTACCGAAAGCTTGCGGAG
AAACATCCATCCTTCAGAGAGAGATCAGAGACAACTGATCTCATTGTGGAAATTTCTTTG
CAGCCCTGGGAAGCTTTTCATCCAGATGGTGTAATCATCTTTTCGGACATACTTACCCCG
CTACCTGCATTTGGTGTCCAATTTGACATTGAAGATGTAAGAGGCCCAGTCATTCAGTCT
CCCATTCGTTCTGAAGAGGGATTGAAAGCATTGCACTCCATTGACTTGGAGAAACTACAA
TTTGTGGGAGACTCACTTAGTATTTTGAGGAAGGAGGTTGGAGAACAAGCTGCAATTTTG
GGTTTTGTCGGAGCGCCTTGGACAATTGCTACCTACATAGTTGAAGGAGGTACAACTCGT
ACATATACGAAGATTAAGGACATGTGCCATACCGCTCCTCATGTTTTGAGAGCTTTGTTA
TCTCATTTATCAAAAGCAATTGCTGAGTATATTGTGTATCAAGTGGAGTCTGGAGCTCAT
TGCATCCAGATATTTGATTCATGGGGTGGACAACTCCCACCTCATATGTGGGACTGCTGG
TCAAAGCCTTATATTGATGAGATAGTTGGTATAATTAAAAGAAAGTGCCCACAAACACCT
CTTGTGCTCTACATTAACGGAAATGGTGGACTTCTTGAACGGATGAAAACAACTGGAGTT
GATGTAATTGGACTTGACTGGACAGTTGATATGGCAGATGGAAGGCGGCGACTAGGAACA
GATATTGGTATACAGGGGAATGTGGATCCCGCTACCTTGTTTTGTCCTCTTCCTGCATTG
ACAGATGAAATTAAAAGGGTTGTCAAGAGTGCAGGGAGTAGTGGTCACATCCTCAATCTT
GGCCACGGTGTGCTCGTGGGTACGCCTGAAGAAGCCGTAGCTCACTTCTTTGATGTTGCT
AAGAGTTTCGATTTTGACAAGGTTGAAGATCATGTATCTGAGGCAGATAAAGTTGTAGCT
TGA

Peptide Sequence

PEP ID

Solyc10g007320.3.1
PEP Infomation

Uroporphyrinogen decarboxylase (AHRD V3.3 *** K4CXR1_SOLLC)
Sequence

MAMAFSPLTTSGCSSYCNLGLSWKSSSLFVELGFVSNGSKGVSAKPAKLNASKVFRACAS
SSNSDPLLVKAARRERVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVEISL
QPWEAFHPDGVIIFSDILTPLPAFGVQFDIEDVRGPVIQSPIRSEEGLKALHSIDLEKLQ
FVGDSLSILRKEVGEQAAILGFVGAPWTIATYIVEGGTTRTYTKIKDMCHTAPHVLRALL
SHLSKAIAEYIVYQVESGAHCIQIFDSWGGQLPPHMWDCWSKPYIDEIVGIIKRKCPQTP
LVLYINGNGGLLERMKTTGVDVIGLDWTVDMADGRRRLGTDIGIQGNVDPATLFCPLPAL
TDEIKRVVKSAGSSGHILNLGHGVLVGTPEEAVAHFFDVAKSFDFDKVEDHVSEADKVVA
*

Transcript Sequence

Transcript ID

Solyc10g007320.3.1
Transcript Infomation

Uroporphyrinogen decarboxylase (AHRD V3.3 *** K4CXR1_SOLLC)
Sequence

GGCAATTAGCTAAGTTTATAAAGGGTGATCCAATAAGGGGGAAAACAAGAAAGATAAGGA
GAGCAGAGGGAGTCTACCTTCTCCCTCAATCAAATGGCTATGGCTTTTTCTCCATTAACA
ACAAGTGGGTGTAGTAGTTATTGCAATCTTGGATTAAGCTGGAAATCATCGAGCTTGTTT
GTGGAATTAGGGTTTGTTTCAAATGGGTCAAAAGGGGTTTCTGCTAAACCCGCAAAGCTC
AATGCTAGTAAAGTTTTTCGGGCATGTGCTTCTTCTTCTAACTCTGATCCTCTTTTGGTG
AAGGCTGCAAGAAGAGAACGGGTGAGTCGCCCACCCGCTTGGATGATGCGTCAAGCGGGA
AGGTATATGGCTGTTTACCGAAAGCTTGCGGAGAAACATCCATCCTTCAGAGAGAGATCA
GAGACAACTGATCTCATTGTGGAAATTTCTTTGCAGCCCTGGGAAGCTTTTCATCCAGAT
GGTGTAATCATCTTTTCGGACATACTTACCCCGCTACCTGCATTTGGTGTCCAATTTGAC
ATTGAAGATGTAAGAGGCCCAGTCATTCAGTCTCCCATTCGTTCTGAAGAGGGATTGAAA
GCATTGCACTCCATTGACTTGGAGAAACTACAATTTGTGGGAGACTCACTTAGTATTTTG
AGGAAGGAGGTTGGAGAACAAGCTGCAATTTTGGGTTTTGTCGGAGCGCCTTGGACAATT
GCTACCTACATAGTTGAAGGAGGTACAACTCGTACATATACGAAGATTAAGGACATGTGC
CATACCGCTCCTCATGTTTTGAGAGCTTTGTTATCTCATTTATCAAAAGCAATTGCTGAG
TATATTGTGTATCAAGTGGAGTCTGGAGCTCATTGCATCCAGATATTTGATTCATGGGGT
GGACAACTCCCACCTCATATGTGGGACTGCTGGTCAAAGCCTTATATTGATGAGATAGTT
GGTATAATTAAAAGAAAGTGCCCACAAACACCTCTTGTGCTCTACATTAACGGAAATGGT
GGACTTCTTGAACGGATGAAAACAACTGGAGTTGATGTAATTGGACTTGACTGGACAGTT
GATATGGCAGATGGAAGGCGGCGACTAGGAACAGATATTGGTATACAGGGGAATGTGGAT
CCCGCTACCTTGTTTTGTCCTCTTCCTGCATTGACAGATGAAATTAAAAGGGTTGTCAAG
AGTGCAGGGAGTAGTGGTCACATCCTCAATCTTGGCCACGGTGTGCTCGTGGGTACGCCT
GAAGAAGCCGTAGCTCACTTCTTTGATGTTGCTAAGAGTTTCGATTTTGACAAGGTTGAA
GATCATGTATCTGAGGCAGATAAAGTTGTAGCTTGAAGACAACAATTTTGTAATGCAGGC
TGGAAGCCTAGGATGCTTGGTTTCACCTTAGGTCCTTTGAGTTGGTTGAGGAGACTAATG
CTTGTGAATAAACTAGCATCTTTATTTTATCTTCTTTTTTTCGAAATATCGAGCAAATTT
GTTATATTATTAGTTATTCTATCAGAAGGG