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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g007280.3.1
CDS Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)
Sequence

ATGTCTCCTGAAGAAATGTCGAATATGAAATCATTAATATCGACTATTGCATCCGTTACT
GCAACAGCTATGCTTGTTCGAAGCATAGCTAGTGACTTTATCCCAAAAGAATATCGTAGT
TATGTCTTTGATAGCTTCCACAGCCTTTTTCATCGTTTCTCTTCGCAATTCACAATCTTG
ATTCATGAATTCCAGGGTCCGTCTCCAAACCTCGTGTTCGAGGCAGTTGAGGTTTATTTA
GGAAGTATAGTGAACTCTTCTACTAAGAGTATTCGATTAGGGAAGACGGAGAATGACAAA
GGGCTAGTTATTACAATGGATAAAGACGAAGAGATCATCGATGTTTTTGAGGATGTTAAG
GTGACATGGAGGATGGAATGTAGACGAATCGAGTCAGGGAGCCAGAACGATGAGATAAAG
GATATGATAGCTGCATTGTGTTCGGAGCTGAGATGTTATGAGTTGAAATTTCATAAGAAA
CATAAGGAGAAGGTGATGAAATCGTATTTACCTTACATTATGGAGAGATCAAAAAACGCG
AAAGAAGAATCCAGGGTTATAAAATTGTATTCTAATTTCAGGAACTGGGGTTCTGATGGA
ATGAATCTCAAACATCCTATGACATTCGATACTCTAGCTATGGACGAAGAGGTAAAAAAC
GCGTTAATTGATGATTTAGAAAGTTTTGTTAAAGGGAAAGAGTACTATAGCAGGATTGGT
AAAGCATGGAAAAGAGGTTACTTGCTTTATGGACCTCCGGGAACTGGTAAATCGAGTTTG
ATTGCTGCTATGGCGAATCATTTGAACTATGATATCTATGATTTAGATCTTACAGAAGTA
CGTAGCAATTCAAATCTTCGATCATTGCTACTTGGTATGTCTGGCCGATCAATACTTGTA
ATCGAAGACATTGATTGCAGTATTAATTTAGAAAACAGAGAACAGAAGGAAGAAAAGGAA
AATAAGCATAACAGAGTTACTCTGTCAGGGATACTTAATTTTCTCGATGGGATATGGTCG
TGTTGTGGAGAGGAACGAGTAATTGTGGTTACGACGAATCACATTGACAAACTTGATGCA
GCATTGTTGAGACCTGGAAGAATGGATATGCACATCAACATGTCATACTGCAAGTCATCG
GCGTTTAAACAATTAGTTTTCAATTATTTAAATATTCATGATCACGAACTGTTTGATCAA
ATCGGAGAGCTATTACAAGTTGTGGAGGTTACACCGGCAGATGTTGCAGGGGAACTGTTG
AAAAGCAAGAATCCAACTATATCCCTTCGAGGGCTCGTTGAATTTTTGAAAATAAAATTG
CAGAAAGAAGAGACGTTGAAATCGCAAAATGGAGGACCAGAGGCAGAGGAAGCATTCAAA
GATGAAACGAAACATGAATCTATACATGATTCTTCTGAGGATCTGAGTAATATTGTTGAT
CTGTAA

Peptide Sequence

PEP ID

Solyc10g007280.3.1
PEP Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)
Sequence

MSPEEMSNMKSLISTIASVTATAMLVRSIASDFIPKEYRSYVFDSFHSLFHRFSSQFTIL
IHEFQGPSPNLVFEAVEVYLGSIVNSSTKSIRLGKTENDKGLVITMDKDEEIIDVFEDVK
VTWRMECRRIESGSQNDEIKDMIAALCSELRCYELKFHKKHKEKVMKSYLPYIMERSKNA
KEESRVIKLYSNFRNWGSDGMNLKHPMTFDTLAMDEEVKNALIDDLESFVKGKEYYSRIG
KAWKRGYLLYGPPGTGKSSLIAAMANHLNYDIYDLDLTEVRSNSNLRSLLLGMSGRSILV
IEDIDCSINLENREQKEEKENKHNRVTLSGILNFLDGIWSCCGEERVIVVTTNHIDKLDA
ALLRPGRMDMHINMSYCKSSAFKQLVFNYLNIHDHELFDQIGELLQVVEVTPADVAGELL
KSKNPTISLRGLVEFLKIKLQKEETLKSQNGGPEAEEAFKDETKHESIHDSSEDLSNIVD
L*

Transcript Sequence

Transcript ID

Solyc10g007280.3.1
Transcript Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)
Sequence

AAAAGAAAAAAAATGTCTCCTGAAGAAATGTCGAATATGAAATCATTAATATCGACTATT
GCATCCGTTACTGCAACAGCTATGCTTGTTCGAAGCATAGCTAGTGACTTTATCCCAAAA
GAATATCGTAGTTATGTCTTTGATAGCTTCCACAGCCTTTTTCATCGTTTCTCTTCGCAA
TTCACAATCTTGATTCATGAATTCCAGGGTCCGTCTCCAAACCTCGTGTTCGAGGCAGTT
GAGGTTTATTTAGGAAGTATAGTGAACTCTTCTACTAAGAGTATTCGATTAGGGAAGACG
GAGAATGACAAAGGGCTAGTTATTACAATGGATAAAGACGAAGAGATCATCGATGTTTTT
GAGGATGTTAAGGTGACATGGAGGATGGAATGTAGACGAATCGAGTCAGGGAGCCAGAAC
GATGAGATAAAGGATATGATAGCTGCATTGTGTTCGGAGCTGAGATGTTATGAGTTGAAA
TTTCATAAGAAACATAAGGAGAAGGTGATGAAATCGTATTTACCTTACATTATGGAGAGA
TCAAAAAACGCGAAAGAAGAATCCAGGGTTATAAAATTGTATTCTAATTTCAGGAACTGG
GGTTCTGATGGAATGAATCTCAAACATCCTATGACATTCGATACTCTAGCTATGGACGAA
GAGGTAAAAAACGCGTTAATTGATGATTTAGAAAGTTTTGTTAAAGGGAAAGAGTACTAT
AGCAGGATTGGTAAAGCATGGAAAAGAGGTTACTTGCTTTATGGACCTCCGGGAACTGGT
AAATCGAGTTTGATTGCTGCTATGGCGAATCATTTGAACTATGATATCTATGATTTAGAT
CTTACAGAAGTACGTAGCAATTCAAATCTTCGATCATTGCTACTTGGTATGTCTGGCCGA
TCAATACTTGTAATCGAAGACATTGATTGCAGTATTAATTTAGAAAACAGAGAACAGAAG
GAAGAAAAGGAAAATAAGCATAACAGAGTTACTCTGTCAGGGATACTTAATTTTCTCGAT
GGGATATGGTCGTGTTGTGGAGAGGAACGAGTAATTGTGGTTACGACGAATCACATTGAC
AAACTTGATGCAGCATTGTTGAGACCTGGAAGAATGGATATGCACATCAACATGTCATAC
TGCAAGTCATCGGCGTTTAAACAATTAGTTTTCAATTATTTAAATATTCATGATCACGAA
CTGTTTGATCAAATCGGAGAGCTATTACAAGTTGTGGAGGTTACACCGGCAGATGTTGCA
GGGGAACTGTTGAAAAGCAAGAATCCAACTATATCCCTTCGAGGGCTCGTTGAATTTTTG
AAAATAAAATTGCAGAAAGAAGAGACGTTGAAATCGCAAAATGGAGGACCAGAGGCAGAG
GAAGCATTCAAAGATGAAACGAAACATGAATCTATACATGATTCTTCTGAGGATCTGAGT
AATATTGTTGATCTGTAAACGAAGACGGAGACACATTTTGTACTTTCTTCTTCTTGTATG
TTGATGAATAAATAGATTATTGAAGCTAACAAGTATTTTGAGCTATCTGTTCAGTCAAAT
CTTTTGCACAGTTTATATATAAATTACAAACACAAAACAAAGTTGATACATTAGTATACA
TACATTAAAAATAATTCG