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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g007050.3.1
CDS Infomation

Methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1 (AHRD V3.3 *-* A0A061R779_9CHLO)
Sequence

ATGGCTATAGCTTCAGCAGCACCATTATTGGCCATGAACGGAGCTCTGAAAATGGCGACA
AATTCACAACAATACGTGGAAGGTACCATTAAAGTCCAGAATAACTCAATTCCTAAACCT
GAACAACTTATCGTCATCTCCTCCTTCAGGGGTGCAGAAGGAAAGGATGGTGGAAGAGAA
TATGTACAATTGAATCATCGCTATCATAATGCCACAGTTAAACTTAATCAGTTCGGACTG
GACTGGACAACAACAACTCATGGTCCTATTCATAACTGCAATGGTGCTTTAAGCAGCACT
CGAAATGTCAAGATGTCTGCAAAAGCAGGTGCTCTTGCTTCAAATGGTGACATTGAGCCA
TTAAGGCGCTGCATCGTTTTGGATATTGAAGGAACCACAACGCCCATATCATTTGTTACA
GACGTTCTTTTTCCTTATGCTCGTGATAATGTGGGGAGGCATTTGGATGCAACATATGAT
TCTGCAGAAACTCAGGAGGATATTAAGCTACTAAGAGCCCAAGTACAAGAAGACTTGGAA
AATGGTGTTGCCGGTGCTGTGCCTATCCCCTCTAATGATGCTGGGAAGGAGAGGGTAATT
GCGGCTTTGGTAACAAATGTGGAGGCTATGATTAAAGCTGACCGAAAAATTACTGCCTTA
AAAGAGTTACAGGGGCATATATGGCAAACGGGGTTTAAAAATAACGAGTTAGAGGGAGTT
GTATTTGATGATGTGCCCGAAGCTCTTGAGAGATGGGCTGCTTCAGGCATCAAGGTGTAC
ATATACTCAAGTGGCAGCAGATTGGCACAAAGACTTTTGTTTGGCTACACAAACTATGGG
GACCTGAGAAAATACCTCTGCGGATTCTTTGATACAACAGTAGGGAATAAGAAAGAAACA
AAAAGTTACCATGAAATTACAGCATCCTTGGGGGTAGATCACCCATCCGAGATTTTGTTC
GTGACTGATGTCTATCAAGAAGCTATAGCTGCAAAACTAGCAGGTTTGGAAGTGATAATA
TCTGTCAGGCCAGGGAATGGACCTCTTCCAGATAATCATGGATTTAGGACGGTCAAGTCC
TTTTCAGAAATCTAA

Peptide Sequence

PEP ID

Solyc10g007050.3.1
PEP Infomation

Methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1 (AHRD V3.3 *-* A0A061R779_9CHLO)
Sequence

MAIASAAPLLAMNGALKMATNSQQYVEGTIKVQNNSIPKPEQLIVISSFRGAEGKDGGRE
YVQLNHRYHNATVKLNQFGLDWTTTTHGPIHNCNGALSSTRNVKMSAKAGALASNGDIEP
LRRCIVLDIEGTTTPISFVTDVLFPYARDNVGRHLDATYDSAETQEDIKLLRAQVQEDLE
NGVAGAVPIPSNDAGKERVIAALVTNVEAMIKADRKITALKELQGHIWQTGFKNNELEGV
VFDDVPEALERWAASGIKVYIYSSGSRLAQRLLFGYTNYGDLRKYLCGFFDTTVGNKKET
KSYHEITASLGVDHPSEILFVTDVYQEAIAAKLAGLEVIISVRPGNGPLPDNHGFRTVKS
FSEI*

Transcript Sequence

Transcript ID

Solyc10g007050.3.1
Transcript Infomation

Methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1 (AHRD V3.3 *-* A0A061R779_9CHLO)
Sequence

GAGATATGCCAATATGGCATCTTCCGCTTCATCTGCCATACTCATACTCATTTCTGTTAG
GGTTTGTGTTAGGGAGACGGCGATTTTGCTTTACCTAACACCGAAGTTTTACGCTCCCTT
CTGTAAACAATAAAACTGAACTCTCAGCAAATACTTACTGCTCCGTCACAATCCTTCTAC
GTATTTTATTTTTTATATTTATAAAATATTATATATTTGTTATAAACTAATTAATATATA
TATATATTTTTTTCTATCCAATTGAAGTAGAGAGAAGATATGGCTATAGCTTCAGCAGCA
CCATTATTGGCCATGAACGGAGCTCTGAAAATGGCGACAAATTCACAACAATACGTGGAA
GGTACCATTAAAGTCCAGAATAACTCAATTCCTAAACCTGAACAACTTATCGTCATCTCC
TCCTTCAGGGGTGCAGAAGGAAAGGATGGTGGAAGAGAATATGTACAATTGAATCATCGC
TATCATAATGCCACAGTTAAACTTAATCAGTTCGGACTGGACTGGACAACAACAACTCAT
GGTCCTATTCATAACTGCAATGGTGCTTTAAGCAGCACTCGAAATGTCAAGATGTCTGCA
AAAGCAGGTGCTCTTGCTTCAAATGGTGACATTGAGCCATTAAGGCGCTGCATCGTTTTG
GATATTGAAGGAACCACAACGCCCATATCATTTGTTACAGACGTTCTTTTTCCTTATGCT
CGTGATAATGTGGGGAGGCATTTGGATGCAACATATGATTCTGCAGAAACTCAGGAGGAT
ATTAAGCTACTAAGAGCCCAAGTACAAGAAGACTTGGAAAATGGTGTTGCCGGTGCTGTG
CCTATCCCCTCTAATGATGCTGGGAAGGAGAGGGTAATTGCGGCTTTGGTAACAAATGTG
GAGGCTATGATTAAAGCTGACCGAAAAATTACTGCCTTAAAAGAGTTACAGGGGCATATA
TGGCAAACGGGGTTTAAAAATAACGAGTTAGAGGGAGTTGTATTTGATGATGTGCCCGAA
GCTCTTGAGAGATGGGCTGCTTCAGGCATCAAGGTGTACATATACTCAAGTGGCAGCAGA
TTGGCACAAAGACTTTTGTTTGGCTACACAAACTATGGGGACCTGAGAAAATACCTCTGC
GGATTCTTTGATACAACAGTAGGGAATAAGAAAGAAACAAAAAGTTACCATGAAATTACA
GCATCCTTGGGGGTAGATCACCCATCCGAGATTTTGTTCGTGACTGATGTCTATCAAGAA
GCTATAGCTGCAAAACTAGCAGGTTTGGAAGTGATAATATCTGTCAGGCCAGGGAATGGA
CCTCTTCCAGATAATCATGGATTTAGGACGGTCAAGTCCTTTTCAGAAATCTAAAGATGG
ACTATCTTGCTCCCCTCCCCTCCCCTCCCCCCCAAAAAAAATAAAATAAACCCCTTTTGT
ATAC