Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g006450.3.1
CDS Infomation	COBRA-like protein (AHRD V3.3 *** L0AUC5_POPTO)
Sequence	ATGATCGTAAGAAGTGAAGGAATGAAAATACCATGGATGAATTTGATCAATTGCATTGTG CTAGTTGTGTTTTGTTATAGTATTGAGGTATGTAATGGTCAGGATTACGGCGGCGGCGAT GAGGCGGTTAAGGCGGCGCCGCCGCCGGCGCAAGAGAATTGCGACGGTGTATTCGTGACG TACGCGTTTGATAATAGGGAAAGGGAATATCCTTTTGTGAAAAACGTAACGGCACAGGCA TGGGCTTTTACGTCGATGTTGACGGTGATAAATACAGGTCTATTTGAGCTCAAATCATGG AAAGTTCAAATAGGATTCCAGCATAATGAGGTTTTGATTTCTACTGAAGGAGCTGTAGCT ATGGGCGGCGACGGATTTCCGGTAAAAACCGGTAAAAACGGTACCGTTTTGGCTGGGTTC CCGCAGTCTGATCTGAAAACGGCAATTGAAACTGCCGGTGATTTTACTCAGATGGCGGCG CAGGTGAAGATAAAAGGAACGCAATTTGGTGTTCCGGCGAAAGCAACTCCAATGCCCAAG TCAATTAATCTCATCAATGATGGATACAAATGCCCTGCTCCTAAGAAATTCAAAACATTT ATGCAGATGTGCTGCAAAAAGGATCCAAAGTTCAAGCCGAAAAATACTTCCATCAAGTTT ATGGAACGTCAAAATGGAGACCTTTCGTTCACCTATGATGTTCTATCCGCGTTTGAGAAC AAGTATCAAGCTCAGGTAACCATCGATAACATCAGTCCATTAGGACGTCTTGATCGTTGG AATTTGACGTGGGAGTGGATGAGGAACGAGTTCATTTATAGCATGAAAGGTGCGTATACT CATAAAAAGGATCCTTCAGAATGCATTTACGGACCTCAAGGACAGTACTACAAGGATTTC GATTTCAGTGTTGTCATGAATTGCCAAAAGAAGCCAGTCATATCCGATTTGCCACCTGAA ATGGAAAACAATGACAAACTTGGCAAGTTACCTTTCTGTTGCAAAAACGGAGCTCTCTTG CCAACTACAATGAACGGGACTAAGGCTCGATCTATTTTCCAGATGGAAGTTTTCAAACTT CCTCCTGATATGAACAGAACTGCCCTGTATCCGCCTCAGAACTGGAATATCGTGGGTAGA GTCAATCCGTCCTACAAATGTGGTCCGCCTATTAGAGTTGATCCAACAGGATTCCCTGAT CCTAATAAAATCGGAATTACTCTTAATGCTGTTGCTAGTTGGCAAATCACTTGCAACATC ACGCGTCCACAGCCAAAACAGGCGAAATGCTGTGTTTCATTCTCAGCTTTCTACACCGAC TCTGTTGTACCCTGCAACACTTGTGCCTGTGGCTGTGAACAGCCGTCTAAATGTGACGGG AATGGAAAAGCATTGCCTCTACCTGCACAAGCCCTTCTAGTCCCTTTCCAAGACAGGGAA AAATTAGCTAAAGAATGGAACAGGATCAAGCATTTAGGCTCAATGCCAAAGAAACTCCCC TGTCCTGATAACTGTGGAGTTAGTATCAATTGGCACTTGGAAAGCAATTACAAAACTGGA TGGACGGCTCGTATGACTCTCTTTAACTGGGGAAATGACGCGTTTGTAGACTGGTTCACA GCTGTTCAGATGAAGAAGAATATTGGTGATGGCTACGAAAACGTTTACTCATTCAATGGG ACTAAGTTACCTCAACGATCCAACACGATTTTTATGCAAGGCTTGAAAGGATTGACCTAT TTGGTTGGACAAGTTAATGGAACTAATCCTAATAAGGATCCAAAAGTACCTGGAAAACAA CAATCAGTGATCTCATTCTTGAAGAAAAATACACCAAATGCTAACATTGAAGGTGGAGAT GGATTCCCTTCTAAGGTGATTTTCAACGGTGAAGAATGCGCGTTACCACCAAATATTCCC AAAAGTCATGCAGCATTCAAATCCCAAGTTGGTTTATTGCCTGCAGTTTTGCTTGCTCTA CTCACTTTTCTTCTCTTGACAGAACAATTCCACTGA

Peptide Sequence

PEP ID	Solyc10g006450.3.1
PEP Infomation	COBRA-like protein (AHRD V3.3 *** L0AUC5_POPTO)
Sequence	MIVRSEGMKIPWMNLINCIVLVVFCYSIEVCNGQDYGGGDEAVKAAPPPAQENCDGVFVT YAFDNREREYPFVKNVTAQAWAFTSMLTVINTGLFELKSWKVQIGFQHNEVLISTEGAVA MGGDGFPVKTGKNGTVLAGFPQSDLKTAIETAGDFTQMAAQVKIKGTQFGVPAKATPMPK SINLINDGYKCPAPKKFKTFMQMCCKKDPKFKPKNTSIKFMERQNGDLSFTYDVLSAFEN KYQAQVTIDNISPLGRLDRWNLTWEWMRNEFIYSMKGAYTHKKDPSECIYGPQGQYYKDF DFSVVMNCQKKPVISDLPPEMENNDKLGKLPFCCKNGALLPTTMNGTKARSIFQMEVFKL PPDMNRTALYPPQNWNIVGRVNPSYKCGPPIRVDPTGFPDPNKIGITLNAVASWQITCNI TRPQPKQAKCCVSFSAFYTDSVVPCNTCACGCEQPSKCDGNGKALPLPAQALLVPFQDRE KLAKEWNRIKHLGSMPKKLPCPDNCGVSINWHLESNYKTGWTARMTLFNWGNDAFVDWFT AVQMKKNIGDGYENVYSFNGTKLPQRSNTIFMQGLKGLTYLVGQVNGTNPNKDPKVPGKQ QSVISFLKKNTPNANIEGGDGFPSKVIFNGEECALPPNIPKSHAAFKSQVGLLPAVLLAL LTFLLLTEQFH*

Transcript Sequence

Transcript ID	Solyc10g006450.3.1
Transcript Infomation	COBRA-like protein (AHRD V3.3 *** L0AUC5_POPTO)
Sequence	ATTCACCCCTATCTATAATACATTTATTTTCTTTTCTTTTCCATTCCCTCCTAAAAATTA GCCAAAAAAAAATCACAAAATCTTCTACAACATTAACCATAACTCCATTTCTAACCATAA AAAAATAATTCAAACATATATAGTAAACTTACTATTTTGTGTTTCCCCCTCAAATATAGT CATAAACTTGAGGAACATATTTCGTTGAACAAGTCATTTAAAATTCGTTTTAATCGTTTG ATTCATAATCTTTTATATTTATGTATCGTACATTTTTCTCTCTCCATATTCAACATTAAT CAACTTATTTGAAATTGAGACGTAGTTGATCGATTTGATTGCCGTGTGTTTTTTCACGCG GCATCAGTTCATCATCGTTCTCTTCCGTCTCCGCTCGGAAAAAAATAAATAAAAATTTAA AAAATTGAACTGAGATACACCTGAAAAAAAATAAAATAAAAAATAAAGGATCAACTATTT TCCGCCATTGATATTCCTTCAAATGATCGTAAGAAGTGAAGGAATGAAAATACCATGGAT GAATTTGATCAATTGCATTGTGCTAGTTGTGTTTTGTTATAGTATTGAGGTATGTAATGG TCAGGATTACGGCGGCGGCGATGAGGCGGTTAAGGCGGCGCCGCCGCCGGCGCAAGAGAA TTGCGACGGTGTATTCGTGACGTACGCGTTTGATAATAGGGAAAGGGAATATCCTTTTGT GAAAAACGTAACGGCACAGGCATGGGCTTTTACGTCGATGTTGACGGTGATAAATACAGG TCTATTTGAGCTCAAATCATGGAAAGTTCAAATAGGATTCCAGCATAATGAGGTTTTGAT TTCTACTGAAGGAGCTGTAGCTATGGGCGGCGACGGATTTCCGGTAAAAACCGGTAAAAA CGGTACCGTTTTGGCTGGGTTCCCGCAGTCTGATCTGAAAACGGCAATTGAAACTGCCGG TGATTTTACTCAGATGGCGGCGCAGGTGAAGATAAAAGGAACGCAATTTGGTGTTCCGGC GAAAGCAACTCCAATGCCCAAGTCAATTAATCTCATCAATGATGGATACAAATGCCCTGC TCCTAAGAAATTCAAAACATTTATGCAGATGTGCTGCAAAAAGGATCCAAAGTTCAAGCC GAAAAATACTTCCATCAAGTTTATGGAACGTCAAAATGGAGACCTTTCGTTCACCTATGA TGTTCTATCCGCGTTTGAGAACAAGTATCAAGCTCAGGTAACCATCGATAACATCAGTCC ATTAGGACGTCTTGATCGTTGGAATTTGACGTGGGAGTGGATGAGGAACGAGTTCATTTA TAGCATGAAAGGTGCGTATACTCATAAAAAGGATCCTTCAGAATGCATTTACGGACCTCA AGGACAGTACTACAAGGATTTCGATTTCAGTGTTGTCATGAATTGCCAAAAGAAGCCAGT CATATCCGATTTGCCACCTGAAATGGAAAACAATGACAAACTTGGCAAGTTACCTTTCTG TTGCAAAAACGGAGCTCTCTTGCCAACTACAATGAACGGGACTAAGGCTCGATCTATTTT CCAGATGGAAGTTTTCAAACTTCCTCCTGATATGAACAGAACTGCCCTGTATCCGCCTCA GAACTGGAATATCGTGGGTAGAGTCAATCCGTCCTACAAATGTGGTCCGCCTATTAGAGT TGATCCAACAGGATTCCCTGATCCTAATAAAATCGGAATTACTCTTAATGCTGTTGCTAG TTGGCAAATCACTTGCAACATCACGCGTCCACAGCCAAAACAGGCGAAATGCTGTGTTTC ATTCTCAGCTTTCTACACCGACTCTGTTGTACCCTGCAACACTTGTGCCTGTGGCTGTGA ACAGCCGTCTAAATGTGACGGGAATGGAAAAGCATTGCCTCTACCTGCACAAGCCCTTCT AGTCCCTTTCCAAGACAGGGAAAAATTAGCTAAAGAATGGAACAGGATCAAGCATTTAGG CTCAATGCCAAAGAAACTCCCCTGTCCTGATAACTGTGGAGTTAGTATCAATTGGCACTT GGAAAGCAATTACAAAACTGGATGGACGGCTCGTATGACTCTCTTTAACTGGGGAAATGA CGCGTTTGTAGACTGGTTCACAGCTGTTCAGATGAAGAAGAATATTGGTGATGGCTACGA AAACGTTTACTCATTCAATGGGACTAAGTTACCTCAACGATCCAACACGATTTTTATGCA AGGCTTGAAAGGATTGACCTATTTGGTTGGACAAGTTAATGGAACTAATCCTAATAAGGA TCCAAAAGTACCTGGAAAACAACAATCAGTGATCTCATTCTTGAAGAAAAATACACCAAA TGCTAACATTGAAGGTGGAGATGGATTCCCTTCTAAGGTGATTTTCAACGGTGAAGAATG CGCGTTACCACCAAATATTCCCAAAAGTCATGCAGCATTCAAATCCCAAGTTGGTTTATT GCCTGCAGTTTTGCTTGCTCTACTCACTTTTCTTCTCTTGACAGAACAATTCCACTGATT TCCCATCCTATCAACTGGGTTTATGTTTCAAGATTTTCTACTAGAGGCAAAATGGAACTT GAAGTTGGGAAGTTGTAAAAGATATGATATGGAAAATACAAAACTTTGTAAACAAAGTTT TTAAGACAAGAAAAAAAAAATGTATAATAATTTGATTGATGTATCTATTTTTTTTAAGAA AAAAAAAATTGCCAACACAAATGAAACATGAAACTTTTTTTTTTCTTTCTTGTGTAGTGG AGTTTGGTGGTGAGAGTATTGAAATTTTTTTTTTATGTTACTTCAATAGGAAGTACATAG AATGGATTATTTATAGGGTTTTAGATACACTATTTGTTCTAGTTCTTCTCACAAGGAGTA CTATTTTTAATATTTCTTCAAATTTCTACTTTAATACTCTTATTCAAGTGATTTTTTTTT CTCATAAAATTGGGTGTAAGGAACGGGAATAGGAAAGGGATCATAAGGTGAGAAATCGAA TCAGAATCGTAGATTTTCAAGTCTAAGATTGCATACAAAATTAGAACGATCTCTCCTTCC TAATATCCAAACGAGGACAAAGGTTCAGTTGGTTGATCAACACTATCTCGATCCTAAACA TACCTAATATTAAAAATATTCAATGTTGTCATTCAATAAAATACAATAAATCAAACTTTG TCTTATTATGACCCCATATGTCCATGAAAGTTATATTTCATTATTTTCAACTTCTAACTT GGAATTAAACTTATTTTCATTAATTTTAAAATCTTTTTAAGAAAAT