Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g006390.3.1
CDS Infomation

FHA domain-containing protein
Sequence

ATGGGGCGCAGCGCCTCTAGATCACCTGCCAGGGGTCGTGGATCTCCTCGCAGGAGGAGC
CCTTCACGCAGGGAAAGGTCACCTGCTCATAAAAGGAGTTCACATGCTGCAAGTTCAGCT
GTAGCAGAGAAGCCTTCAAGACGTGCAAGGTCAAGATCTCCTGTTCCTCTTTCACCTGCT
CGAGAGAAGCCTTCTAGTCGAAATAAATCCCCAAAGCGCAGAAAATCAATCTCCCCTGCA
TCTGACTCCCCAGTCAGAGAGAAACCCTCAAGTCGCATGAAGTCCTTCAAACGAGCTAAG
TCAAGGTCTCCGGATTCAAAGTTGTTACAGGGAGAGAAATCTTCAGGCCGAGCCAGGTCT
CCTAAACGTGCCAAGTTGCAGTCTCCTGAACAGCGCTCACCCTCACCACGAACAAAAAGA
CTGAGGAGAGCAGAACGAGAGACTGAAGAAAAATTGAGGGAGCGGGATCCGGAGAAGAAT
CACAGGAGATCTAATGATAGGGCTACATATAGGGAAAAGGATTCTGACAAAATGTTGCCT
GAATCTCGCTCACCCTCACCACGAACAAAGAGACTAAGAAGAGCAGAACGAGAAGCTGAA
GAAAAGCCAAGGGAACGGGAGCCTGAAAAAAATCATGGGAGAGCTAGTGATAGGGCTACA
CATAGAGAAAAAGATTCTGACAGAATGTTACCTGAATCTCGTTCACCCTCACCACGAACA
AAGAGACTAAGGAGAGCAGATCGAGAAGCTGTAGAGAAGTCGAGGGAGCGGGAGCCTGAA
AAAAACCATGGGAGAGCTAGTGATAGGGCGGCACATAAGGATTCTGATAGAGTGATGCAA
ATCGAAAAGAGAGAGACAAAATCAGGAAAGGACTCAAAGGATAATGGATCGTATAAGTCG
AGAAATGGTCTATCAGCTTCACTTTCAGAACGTCAGCATAGAAGTCGGCACAGATCAAGA
TCACCTGTAGCAGCTGATAGTAGAGCACATTCTGAGGTAACAAACTTAACGAGAGATGAA
CTCAGGAATGGTGAAGATGACTCCTTATCTAAAATGATGGAAGCTGAGGAGGCCTTGGAA
GCTAAAAATAAAGATAAGCCTTCGTTTGAGCTCTCTGGAAAGCTTGCAGCAGAAACTAAT
CGAGTAAGAGGCATAACACTTCTCTTCAATGAGCCACCAGATGCTAGAAAACCCGACATA
AGATGGCGCTTGTATGTTTTTAAGGGCGGTGAAGTCCTTAATGATCCTCTATATGTTCAT
CGCCAAAGCTGTTATCTTTTTGGGAGAGAAAGGAGGGTTGCAGACGTTCCCACAGATCAC
CCATCTTGCAGCAAGCAACATGCTGTCCTCCAGTACCGGCAAGTTGAGAAGGACAAACCC
GACGGTACTTCATCAAAGCAAGTAAGGCCATACGTAATGGATCTTGGAAGCACTAATGGT
ACTTTCATTAATGAAAACCGGATTGAGCCTGAGAGATACTATGAACTATTTGAAAAGGAT
ACCCTTAAGTTTGGTAATAGTAGCCGAGAGTATGTACTGCTTCACGAGAATTCAGCATGA

Peptide Sequence

PEP ID

Solyc10g006390.3.1
PEP Infomation

FHA domain-containing protein
Sequence

MGRSASRSPARGRGSPRRRSPSRRERSPAHKRSSHAASSAVAEKPSRRARSRSPVPLSPA
REKPSSRNKSPKRRKSISPASDSPVREKPSSRMKSFKRAKSRSPDSKLLQGEKSSGRARS
PKRAKLQSPEQRSPSPRTKRLRRAERETEEKLRERDPEKNHRRSNDRATYREKDSDKMLP
ESRSPSPRTKRLRRAEREAEEKPREREPEKNHGRASDRATHREKDSDRMLPESRSPSPRT
KRLRRADREAVEKSREREPEKNHGRASDRAAHKDSDRVMQIEKRETKSGKDSKDNGSYKS
RNGLSASLSERQHRSRHRSRSPVAADSRAHSEVTNLTRDELRNGEDDSLSKMMEAEEALE
AKNKDKPSFELSGKLAAETNRVRGITLLFNEPPDARKPDIRWRLYVFKGGEVLNDPLYVH
RQSCYLFGRERRVADVPTDHPSCSKQHAVLQYRQVEKDKPDGTSSKQVRPYVMDLGSTNG
TFINENRIEPERYYELFEKDTLKFGNSSREYVLLHENSA*

Transcript Sequence

Transcript ID

Solyc10g006390.3.1
Transcript Infomation

FHA domain-containing protein
Sequence

ACTCGAAGATCCGAGATTTTCATTCATCACTATCCTTTACTCTTCTGGTTTCTGAGTTTT
TCTTTTCTTCCAACTTTTCAATGCGCGGCAAACCCTAATCCTCTTCAGCTTTAGTTTTTG
CCAAGATTCATCTGCCCAGTCAACCTCTATAATGGGGCGCAGCGCCTCTAGATCACCTGC
CAGGGGTCGTGGATCTCCTCGCAGGAGGAGCCCTTCACGCAGGGAAAGGTCACCTGCTCA
TAAAAGGAGTTCACATGCTGCAAGTTCAGCTGTAGCAGAGAAGCCTTCAAGACGTGCAAG
GTCAAGATCTCCTGTTCCTCTTTCACCTGCTCGAGAGAAGCCTTCTAGTCGAAATAAATC
CCCAAAGCGCAGAAAATCAATCTCCCCTGCATCTGACTCCCCAGTCAGAGAGAAACCCTC
AAGTCGCATGAAGTCCTTCAAACGAGCTAAGTCAAGGTCTCCGGATTCAAAGTTGTTACA
GGGAGAGAAATCTTCAGGCCGAGCCAGGTCTCCTAAACGTGCCAAGTTGCAGTCTCCTGA
ACAGCGCTCACCCTCACCACGAACAAAAAGACTGAGGAGAGCAGAACGAGAGACTGAAGA
AAAATTGAGGGAGCGGGATCCGGAGAAGAATCACAGGAGATCTAATGATAGGGCTACATA
TAGGGAAAAGGATTCTGACAAAATGTTGCCTGAATCTCGCTCACCCTCACCACGAACAAA
GAGACTAAGAAGAGCAGAACGAGAAGCTGAAGAAAAGCCAAGGGAACGGGAGCCTGAAAA
AAATCATGGGAGAGCTAGTGATAGGGCTACACATAGAGAAAAAGATTCTGACAGAATGTT
ACCTGAATCTCGTTCACCCTCACCACGAACAAAGAGACTAAGGAGAGCAGATCGAGAAGC
TGTAGAGAAGTCGAGGGAGCGGGAGCCTGAAAAAAACCATGGGAGAGCTAGTGATAGGGC
GGCACATAAGGATTCTGATAGAGTGATGCAAATCGAAAAGAGAGAGACAAAATCAGGAAA
GGACTCAAAGGATAATGGATCGTATAAGTCGAGAAATGGTCTATCAGCTTCACTTTCAGA
ACGTCAGCATAGAAGTCGGCACAGATCAAGATCACCTGTAGCAGCTGATAGTAGAGCACA
TTCTGAGGTAACAAACTTAACGAGAGATGAACTCAGGAATGGTGAAGATGACTCCTTATC
TAAAATGATGGAAGCTGAGGAGGCCTTGGAAGCTAAAAATAAAGATAAGCCTTCGTTTGA
GCTCTCTGGAAAGCTTGCAGCAGAAACTAATCGAGTAAGAGGCATAACACTTCTCTTCAA
TGAGCCACCAGATGCTAGAAAACCCGACATAAGATGGCGCTTGTATGTTTTTAAGGGCGG
TGAAGTCCTTAATGATCCTCTATATGTTCATCGCCAAAGCTGTTATCTTTTTGGGAGAGA
AAGGAGGGTTGCAGACGTTCCCACAGATCACCCATCTTGCAGCAAGCAACATGCTGTCCT
CCAGTACCGGCAAGTTGAGAAGGACAAACCCGACGGTACTTCATCAAAGCAAGTAAGGCC
ATACGTAATGGATCTTGGAAGCACTAATGGTACTTTCATTAATGAAAACCGGATTGAGCC
TGAGAGATACTATGAACTATTTGAAAAGGATACCCTTAAGTTTGGTAATAGTAGCCGAGA
GTATGTACTGCTTCACGAGAATTCAGCATGATGAAAGTCTCGCTAAAATGCTAGATAGAG
GTGTCATTTGCATCGACTGGCTTGATGTTGGACGCGTTCATTCACAAACGATCAAACATT
TGTTAGGCCTTGTTTACCAGCACACTAGCCATTGCAAGTTTTCAGCTAAAATCGTGTAAT
GTGCTCGAGATTTGGGCATTGTTAATGGAAATTTTGGTTCCATAGCCTCCATGATTCTTG
GATGGTTTGTTCTAGTTTGTTTATAAGCTCTTAGTTCCCTCATAAATGGGATTGTGTAAA
ATTGTTTATCAGGCCATAACTAGTGAATGTGCACTCACATTTCCCTCAAGTAATGAATAT
TTATCTTTTCCTATCATTGTTTTGTTATAAAAACTGAATCTAATGATTTGGTGTGTTGGA
TTAAGTTCTCATCACTAAAATTTGTCATGTTTTTTTTTTTACTATTTTATGATGGTATTC
GAGTCGGTCCTTTTTCACGTGTTGTTTTACCTTG