Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g006190.3.1
CDS Infomation

Cell differentiation protein rcd1, putative (AHRD V3.3 *** B9STZ0_RICCO)
Sequence

ATGACAAACTTACCTCAGTCTCCCTCAGTCGGTGTCAGCAGTTCCTCAAGAGGTGGTATG
TCATCATCGTCTTCTAGTGAAGGAGCACCGGTCAATAGGGATCGCCAAATGCAATCTGCT
CAACAGCTTGTGCTTGATATCTGCAACCCGAATCTTCGTGAAAATGCTCTTCTGGAACTT
TCCAAGATGAGGGAAATTTTTGAGGATTTGGCCCCGGTATTATGGCACTCTTTTGGTACC
ATTGTTGTATTTGTACAGGAGATAATTTCTGTCTACCCTGTTTTGTCACCGCCAAACCTG
ACTCCTGCACAATCCAATAGAGTTTGTAATGTACTAGCACTTCTTCAGTGTGTAGCCTCT
CACCCTGACACCAGAATGTTGTTACTCCACGCATATATTCCTTTGTATCTGTACCCCTTT
CTTAATACAACAATCAGGTCAACACCATTTGAACATTTGAGGCTTACAAGCTTAGGCGTT
ATTGGTGCCCTTGTGAAGATAGACAACACTGAAGTTATCAGTTTTCTTGTTTCGACAGAG
ATAGTTCCTCGGTGCTTATGCTCAATGGAGATGGGGAGTGAACTATCAAAAACAGTTGCG
ACTTTCATTGTGCAAAAAATCCTTCTAGATGATGTGGGTCTGAAGTACATCTGTACCACG
TCGAATAGGTTTTTTGAAGTAGCTCAAGCTTTAGGGAATATGGTCGGTGCGCTTGCTCAG
CAGCCTTCATCAAGATTGCTGAAATACATAATCAGATGCTATCTTCGTTTATCAGATGAG
CCAAGGGCTTGTCAGGCACTGAAAAATTGTCTTCCCGATAGGCTTAGAGATGACACCTTC
AGCAGTTGTCTTAGTGAGGATCCAACAACGAGAACATGGCTGCAGCAATTGCTCCTTAAT
GTTAATGGGAATCAGGTTGCCCCAGAAGCTGGAGGATTTGATCGGATGCCGTGA

Peptide Sequence

PEP ID

Solyc10g006190.3.1
PEP Infomation

Cell differentiation protein rcd1, putative (AHRD V3.3 *** B9STZ0_RICCO)
Sequence

MTNLPQSPSVGVSSSSRGGMSSSSSSEGAPVNRDRQMQSAQQLVLDICNPNLRENALLEL
SKMREIFEDLAPVLWHSFGTIVVFVQEIISVYPVLSPPNLTPAQSNRVCNVLALLQCVAS
HPDTRMLLLHAYIPLYLYPFLNTTIRSTPFEHLRLTSLGVIGALVKIDNTEVISFLVSTE
IVPRCLCSMEMGSELSKTVATFIVQKILLDDVGLKYICTTSNRFFEVAQALGNMVGALAQ
QPSSRLLKYIIRCYLRLSDEPRACQALKNCLPDRLRDDTFSSCLSEDPTTRTWLQQLLLN
VNGNQVAPEAGGFDRMP*

Transcript Sequence

Transcript ID

Solyc10g006190.3.1
Transcript Infomation

Cell differentiation protein rcd1, putative (AHRD V3.3 *** B9STZ0_RICCO)
Sequence

TATCCCTAAATTCGGGAACGTAGCAAACTAGCAATTTAGGCATTTCACGTTAGCGCTTTT
CTGATACAACTCAGCTTTCTCCGCCCGGGAAAATATCGTTTTCGCGCGCGCGCTCCACCG
GATTTTGAACATTCAGAACATATGCAATCGCCGGAAGTTTGCGCGATGGTAACCGACGCA
AATAGGTTGACGCCGGCGGAGGAAGAAATTACGAACACGGCGACATCAGTACAGGCAGTG
GAAGAGTTATTGAAATATCGATTTCAGAACACGAAGCTTCTAGAAGAAGCTCTTACTCAC
TCTTCCTGTCCTAATTTAATTACTAATTACCAGCGGTTAGCGTTCGTCGGTGACGCTGCT
CTTGGCTTAGCTATTTCCAGTTATTTCTTCGTTACTTACCCTGATGTTGACTGTGGTAGG
CTTACTGACCTTCGTTCTGCCAATTTAAGTACGGAAAAGCTTGCTAGAGTTGCAGTCGGG
CACGGCCTTTAGAAGTACCTCCGCCGCAATTCATCAATCCTCGATGAAAAGGTGAAGGAA
TTTGTGATAACAGTGCAACAGGAGGAGGAGATGGAGTTCTATGGATGAATGATTAAAGCA
CCAAAGGTTCTTGCAGACATTGTGGAGTCGGTAATGGGGGCTGTATATTTGGATTGTGGC
TTTGATGTGAATGCTGTCTGGGTGAAAATTGGTGAGTGATTCAATGAGAAAGCCCATGGG
ATCCAATTTGCCCAGACAGGCACCTGTAGGCAGATGTAGCATTTCTTTCTTTGCTCCAAT
GATTGATTTATTTCTTGGAAGGGAAGAAATGATGAGGTATTACAATTGCAGAAAATTGGT
GAGTGATTCAATGAGAAAGCCCATGGGAGCCAATTTGCCCAGACAGGCACCTGTAGGCAG
ATGTAGCATTTCTTTCTTTGCTCCAATGATTGATTTATTTCAGAGATTTCATCAATGTCT
TATGAATACAATTATTTTGTTGAGCTATAAATAGGACATTCTTGTTTTACAAAGAGAAAT
GACGTCCTGATGTTTAGATATCTAGTTGCCTTTTTTGATTTAGATCTTCAGAGGCTTCCT
AGAGCCTATTGTTATGCTGAATACGTTGGAAGAACAACCACAGCCTGTAAAAATGTTGTT
TGGACTTTGCAAAAAGGATGGAAAACAAGTTGATGTAGAACATCGGAAAGAGGAGATAAA
AACATAGCTAGCGTCTATCTTGATGGACAATTTATTGCATCAGCTTCGTCTGAGCACAAA
GAAAATGCAAAGCTTCAAGTGGCAAAAGCTGCTCTAAAAGAGTTGTTCTATAACCCTTTT
GATAAGATGGATGTTGAATTTGTTCCATTCCAGAGAAAAAAGAGGGATTCTGAATCTATA
ACATTTCAGAAAAAAAAGATGGATGTTGAATTTGACCCAACAAAAGAGTGTGAAGGAGCA
AAGCAGAAGCTAAACGGGCTTTGCCAGATAGAGAAATGGCCCAAACCAACTTACAGAGTA
GAGAAAGAGATAGGTCCTGTTCATGATAGGAGGTTTATATGCTCTGTGCAAATTATAATT
GCTGAAGGCATGCTTTTTGTGAGGGGGATGAAAAGTCACGAGTAAAAGATGCAGAGAATT
CTGCAGCTTTAGCAACTATCCGGAGTATGCAGGAATCAAAGTTCAGTTGATTTGTTCATC
GTTCCACATTCCAATTCCAGGATGAAGCAGTTTGGGAACAGAAGAAAAAAGAGAGAAAAT
AAAGTAGGTAAAGCGAAAGGAAGAAAAAGATTACGACATTCGATTAAGGCTTTAGAATGA
CAAACTTACCTCAGTCTCCCTCAGTCGGTGTCAGCAGTTCCTCAAGAGGTGGTATGTCAT
CATCGTCTTCTAGTGAAGGAGCACCGGTCAATAGGGATCGCCAAATGCAATCTGCTCAAC
AGCTTGTGCTTGATATCTGCAACCCGAATCTTCGTGAAAATGCTCTTCTGGAACTTTCCA
AGATGAGGGAAATTTTTGAGGATTTGGCCCCGGTATTATGGCACTCTTTTGGTACCATTG
TTGTATTTGTACAGGAGATAATTTCTGTCTACCCTGTTTTGTCACCGCCAAACCTGACTC
CTGCACAATCCAATAGAGTTTGTAATGTACTAGCACTTCTTCAGTGTGTAGCCTCTCACC
CTGACACCAGAATGTTGTTACTCCACGCATATATTCCTTTGTATCTGTACCCCTTTCTTA
ATACAACAATCAGGTCAACACCATTTGAACATTTGAGGCTTACAAGCTTAGGCGTTATTG
GTGCCCTTGTGAAGATAGACAACACTGAAGTTATCAGTTTTCTTGTTTCGACAGAGATAG
TTCCTCGGTGCTTATGCTCAATGGAGATGGGGAGTGAACTATCAAAAACAGTTGCGACTT
TCATTGTGCAAAAAATCCTTCTAGATGATGTGGGTCTGAAGTACATCTGTACCACGTCGA
ATAGGTTTTTTGAAGTAGCTCAAGCTTTAGGGAATATGGTCGGTGCGCTTGCTCAGCAGC
CTTCATCAAGATTGCTGAAATACATAATCAGATGCTATCTTCGTTTATCAGATGAGCCAA
GGGCTTGTCAGGCACTGAAAAATTGTCTTCCCGATAGGCTTAGAGATGACACCTTCAGCA
GTTGTCTTAGTGAGGATCCAACAACGAGAACATGGCTGCAGCAATTGCTCCTTAATGTTA
ATGGGAATCAGGTTGCCCCAGAAGCTGGAGGATTTGATCGGATGCCGTGAACTGAATTCG
TACAAATGGGACTTGAACTAAGGGTGAATTTCTGTACTCATAGGACGTGGAATTTGATGG
AGTATTTAAGGAGGCATACTTGGGAACTTATCTGCACTCATATTTATTTATATGTACTGT
ATTATGTGAATTGTTGTGAAGATTATTATTAGGATATTAAGACTAGTACTGTACCTTTAC
TAAGCCTGTCTATTTGGTTTTTTTCACTTGGTGTCCGGTACTCTCGTATCAAGGCCTATC
TAGATTTGGATTCGTGCTATTTCAAGCCTTCTGGTTAAGAAAGCAAGAATACATATCATT