Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g006100.3.1
CDS Infomation

Transcription initiation factor TFIID subunit-like protein (AHRD V3.3 *** G7KXV7_MEDTR)
Sequence

ATGAGTATAGTACCGAAAGAGACAATAGAAGTGATATCACAAAGTATAGGTGTAAGCAAT
TTATCACCAGATGTCTTGCCTGCTCTGGCCGTCGATGTCGAATACCGTATTCGAGAGATT
ATGCAGGAAGCTATTAAATGTATGCATCATTCGAAGAGAACTACGTTATCTACTGATGAT
GTGGATGCTGCACTTAGCTTGAGAGGTGTAGAGCCAATATATGGCTTTGCTTCAGGAGAT
CCGTTAAGGTTCAGGAGAGCAGCTGGACATAAGGATTTGTTCTATATTGAAGAGAAGGAT
GTAGAATTCAAAGATGTGATCGAAGCTCCTTTGCCGAAAGCACCACTAGATGCTGCTGTT
GTTGCCCATTGGTTAGCTATAGAAGGAGTACAACCTGCTATTCCTGAAAACCCTCTGCCT
GAAGTCTTAGCTATGCCGTCTGATAATAGAAATACCGAGTATAAGGAGGATGGAGTTCCT
GTTGATATTAAAGTACCTGTTAAGCATGTCCTATCGCGTGAGCTTCAGCTCTATTATGAA
AAAATTAAAGAGCTTACAGTGAATAGATCTAATCCCTTTCTCTTTAAAGAAGCTCTACAA
AGCTTAGCAACAGACTCAGGGATTCATCCAGTAGTACCTTACTTTACATATTTTGTATCT
GATGAGGTTTCTCGGAATTTGAACAATTTTCCTCTCCTTTTCGCTTTGATGCGACTACTC
TGGAGCCTTCTCCAGAATAAGCAAGTACATATTGAACCATATCTGCACCAGTTGATGCCT
TCTATAATGACATGCCTTGTTGCAAGAAGGTTGGGAAACAGATTATCTGACAATCATTGG
GAACTTAGGGACTTCTCAGCTACATTGATTGCTTTAATATGCAAGAGATATGGTCGTGTG
TACCACAATCTCCAGTCACGTGTCACCAGTACTTTGCTGCATGCTTTTCTGGATCCAACT
AAAGCGCTGCCACAACATTATGGAGCAATTCAAGGGCTCGCAGCTCTTGGACCTGGGGTG
GTTCGCCTACTTGTGCTGCCAAATCTTGAGGCTTATTTGCAATTACTAGAACCCGAAATG
CAGCCCGAGAAGCAAAAAAATGAAATGAAGAGGTTTGAAGCTTGGCGTGTATATGGAGCC
TTGATGTGTGCTGCTGGTTTATGCATCTACGAGCGCTTCAAGTTGCTTCCAGCTTCACTA
TCTCCATCTACTCGCACATTCTTGAAGAGTAAATGGAAAGTCTCAACTACATTGTCGTCG
GGCAAACGGAAAGCAAGCTTGAACAACATGATGACCCAGCCTCCACCCAAGAGATTAATG
ACAGATGGTCCAATTAGTTCAATGACGGCAAATTCTCTGCCAGTAAGCACACAAGGACCA
GCTGTTGGATATGCTGTAACCCCTAGGGTTACAGAAACTGGTGTATCTTCAGCATCACAT
GGTTTGCAGCAAAACGAGAATATGCTGAGGACCATTGGTAGAAGGGATATGACTACTGGT
CAAGGTCAAAAAACATCGGTTCCTCTTGATCAGGCCTGGAAGGAAGATCTGGATGCCGTA
CGGTTGTTGCCATCTCTGTTTGAATGTTTTGGTGAAAGGATGTTTTCTTTTATCCCTTCA
CCTGAGTTGTCTTTCTTTTTGTGA

Peptide Sequence

PEP ID

Solyc10g006100.3.1
PEP Infomation

Transcription initiation factor TFIID subunit-like protein (AHRD V3.3 *** G7KXV7_MEDTR)
Sequence

MSIVPKETIEVISQSIGVSNLSPDVLPALAVDVEYRIREIMQEAIKCMHHSKRTTLSTDD
VDAALSLRGVEPIYGFASGDPLRFRRAAGHKDLFYIEEKDVEFKDVIEAPLPKAPLDAAV
VAHWLAIEGVQPAIPENPLPEVLAMPSDNRNTEYKEDGVPVDIKVPVKHVLSRELQLYYE
KIKELTVNRSNPFLFKEALQSLATDSGIHPVVPYFTYFVSDEVSRNLNNFPLLFALMRLL
WSLLQNKQVHIEPYLHQLMPSIMTCLVARRLGNRLSDNHWELRDFSATLIALICKRYGRV
YHNLQSRVTSTLLHAFLDPTKALPQHYGAIQGLAALGPGVVRLLVLPNLEAYLQLLEPEM
QPEKQKNEMKRFEAWRVYGALMCAAGLCIYERFKLLPASLSPSTRTFLKSKWKVSTTLSS
GKRKASLNNMMTQPPPKRLMTDGPISSMTANSLPVSTQGPAVGYAVTPRVTETGVSSASH
GLQQNENMLRTIGRRDMTTGQGQKTSVPLDQAWKEDLDAVRLLPSLFECFGERMFSFIPS
PELSFFL*

Transcript Sequence

Transcript ID

Solyc10g006100.3.1
Transcript Infomation

Transcription initiation factor TFIID subunit-like protein (AHRD V3.3 *** G7KXV7_MEDTR)
Sequence

ATCTATTCACTAAAGAAAATAATGGTTATGCTTTATTTTTATGCGGATTTTCATTAAAAA
AATTCAAATTTGAGAAATTAAACGCACAAGTAACTTTTATTATTATTTATATAATGTAAT
TTATCATCGAACGAAATTATCTTACCGGACTCTGTTCCTCGTGGATAAAGATAAAAGTTA
AAGAGTTTGTAAATTTTGTCTAGGTTTTAAATACTGGTGCTCCGACTCTTTATCTTACTA
CTTGACCCGATTGAAACGACCCGTTGGGTCACTGTCCTCGGCGAGACTGCGCATTGTAGC
TTTTACGCTTTCATACAATTTTCTCTCTCTACCCTCCGCTTAGGTTTTAATCTCTCCATT
CCATCGCCGCTCCGCCGCCGTTCACCGCTTCAGAGTTCCTCATACGTAGCTGTGCTAGAA
GTAATCTTCGCCTGAAAAACTGACCGAGATAGACGAATTTCTGGGTTCGCAGCTGGATTT
AACCTAGAGTAACCGGAGCTAGTAGAAAGATGAGTATAGTACCGAAAGAGACAATAGAAG
TGATATCACAAAGTATAGGTGTAAGCAATTTATCACCAGATGTCTTGCCTGCTCTGGCCG
TCGATGTCGAATACCGTATTCGAGAGATTATGCAGGAAGCTATTAAATGTATGCATCATT
CGAAGAGAACTACGTTATCTACTGATGATGTGGATGCTGCACTTAGCTTGAGAGGTGTAG
AGCCAATATATGGCTTTGCTTCAGGAGATCCGTTAAGGTTCAGGAGAGCAGCTGGACATA
AGGATTTGTTCTATATTGAAGAGAAGGATGTAGAATTCAAAGATGTGATCGAAGCTCCTT
TGCCGAAAGCACCACTAGATGCTGCTGTTGTTGCCCATTGGTTAGCTATAGAAGGAGTAC
AACCTGCTATTCCTGAAAACCCTCTGCCTGAAGTCTTAGCTATGCCGTCTGATAATAGAA
ATACCGAGTATAAGGAGGATGGAGTTCCTGTTGATATTAAAGTACCTGTTAAGCATGTCC
TATCGCGTGAGCTTCAGCTCTATTATGAAAAAATTAAAGAGCTTACAGTGAATAGATCTA
ATCCCTTTCTCTTTAAAGAAGCTCTACAAAGCTTAGCAACAGACTCAGGGATTCATCCAG
TAGTACCTTACTTTACATATTTTGTATCTGATGAGGTTTCTCGGAATTTGAACAATTTTC
CTCTCCTTTTCGCTTTGATGCGACTACTCTGGAGCCTTCTCCAGAATAAGCAAGTACATA
TTGAACCATATCTGCACCAGTTGATGCCTTCTATAATGACATGCCTTGTTGCAAGAAGGT
TGGGAAACAGATTATCTGACAATCATTGGGAACTTAGGGACTTCTCAGCTACATTGATTG
CTTTAATATGCAAGAGATATGGTCGTGTGTACCACAATCTCCAGTCACGTGTCACCAGTA
CTTTGCTGCATGCTTTTCTGGATCCAACTAAAGCGCTGCCACAACATTATGGAGCAATTC
AAGGGCTCGCAGCTCTTGGACCTGGGGTGGTTCGCCTACTTGTGCTGCCAAATCTTGAGG
CTTATTTGCAATTACTAGAACCCGAAATGCAGCCCGAGAAGCAAAAAAATGAAATGAAGA
GGTTTGAAGCTTGGCGTGTATATGGAGCCTTGATGTGTGCTGCTGGTTTATGCATCTACG
AGCGCTTCAAGTTGCTTCCAGCTTCACTATCTCCATCTACTCGCACATTCTTGAAGAGTA
AATGGAAAGTCTCAACTACATTGTCGTCGGGCAAACGGAAAGCAAGCTTGAACAACATGA
TGACCCAGCCTCCACCCAAGAGATTAATGACAGATGGTCCAATTAGTTCAATGACGGCAA
ATTCTCTGCCAGTAAGCACACAAGGACCAGCTGTTGGATATGCTGTAACCCCTAGGGTTA
CAGAAACTGGTGTATCTTCAGCATCACATGGTTTGCAGCAAAACGAGAATATGCTGAGGA
CCATTGGTAGAAGGGATATGACTACTGGTCAAGGTCAAAAAACATCGGTTCCTCTTGATC
AGGCCTGGAAGGAAGATCTGGATGCCGTACGGTTGTTGCCATCTCTGTTTGAATGTTTTG
GTGAAAGGATGTTTTCTTTTATCCCTTCACCTGAGTTGTCTTTCTTTTTGTGATCCTTGT
GGATGGGGGACAGTGGGAATGAATATCAACTGCATTCATTCGCCTTTTTGGGTACATTAC
TATTTATGTATTATATGTTGCATCTTCTCCTTGAGATGCATCAAGTGTGTTGTTGAAATA
GATAGTATGCTTTATCATGACTGACGTAACTTTTATTTTTGGGCGTTTTGGCGTCTTGAA
ACACAAATTCATGATTATTGCAGCCTCATTAGTACATGATTTTTT