Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g005890.3.1
CDS Infomation

DNA damage-inducible protein 1 (AHRD V3.3 *** A0A0B2RHB2_GLYSO)
Sequence

ATGAAGATCACTGTAATGACGACTGACGAACAAATCGTCACTCTCGATGTGGATCGTGAC
GAATCTGTAGAGAACCTGAAAGCTCTGCTGGAAGTTGAGACACAAGTGCCTCTGCAACAG
CAACAGCTTCTGTACAATGGGAAGGAAATGAGGAATTCTGACAAACTGAGTGCTGTAGGC
GTTGGTGATGGTGATTTGGTAATGATGGTGTCTAGTGCAGCATCCCAGTCTAGTGCCCCT
GCAAATGACTTGAGCTTCAAACAAGATGGATCTGCAGTAAATCCTTCAGCTTTCCAACAA
CACTTGCGAAATGATTCAAATTTGATGGCCCAACTTTTTCAGAATGATCCTGAGTTAGCA
CAAGCTGTCCTTGGGAATGACCTAAATAGGCTACAAGAGCTTCTACGTTTGCGTCATCAG
CATAAATCAGAGCTACGGCGTCGTCAAGAAGAGGAGATGGCACTGCTGTATGCTGATCCA
TTCGATGTCGAGGCACAAAGGAAAATTGAAGAGCAAATTCGCCAGAAAGGAATTGAAGAA
AATTGGGCAGCTGCACTAGAACACAATCCTGAAGCTTTTGGAACTGTGGTTATGTTATAT
GTTGACATGGAAGTAAATGGTCATCCTCTAAAGGCTTTCGTGGATAGTGGAGCTCAGTCA
ACAATTATATCTAAAAGCTGTGCAGAACGTTGTGGATTGTGGAGATTATTAGATACACGC
TACAAGGGAATTGCTCGTGGAGTTGGTCAAACAGAGATACTAGGTCGTATTCATGTTGCT
CCAATCAAGATTGGAAAAATCTTCTACCCTTGTTCTTTTGTGGTGCTGGATTCTCCCAAT
ATGGAATTTCTCTTTGGACTTGATATGCTTCGCAAGCACCAGTGCATGATTGATCTGAAG
GACAATGTTCTGAGAGTTGGCGGAGGAGAGGTTGCTGTACCATTTCTACATGAGAAGGAT
ATTCCCAGTCATTTTCTCGATGAGAGGAAGGCCGAGGCTTCGAGCTCAGGAGCCCAGGCA
ACATCAGGAGCAACGGGGAAGACTGATCCTACAAAAGGAAGTCCTTCTGGAAGTGCCGGT
GGGAACTTAACACAGGGACCTGAATTTGAAGCCAAAGTTGCAAAGCTTGTTGAGTTAGGC
TTTGGAAGGGAGGCAGTAGTACAAGCTCTCAAGTTTTTTGATGGTAACGAAGAACAAGCT
GCCGGATATCTATTTGGGGGTTGA

Peptide Sequence

PEP ID

Solyc10g005890.3.1
PEP Infomation

DNA damage-inducible protein 1 (AHRD V3.3 *** A0A0B2RHB2_GLYSO)
Sequence

MKITVMTTDEQIVTLDVDRDESVENLKALLEVETQVPLQQQQLLYNGKEMRNSDKLSAVG
VGDGDLVMMVSSAASQSSAPANDLSFKQDGSAVNPSAFQQHLRNDSNLMAQLFQNDPELA
QAVLGNDLNRLQELLRLRHQHKSELRRRQEEEMALLYADPFDVEAQRKIEEQIRQKGIEE
NWAAALEHNPEAFGTVVMLYVDMEVNGHPLKAFVDSGAQSTIISKSCAERCGLWRLLDTR
YKGIARGVGQTEILGRIHVAPIKIGKIFYPCSFVVLDSPNMEFLFGLDMLRKHQCMIDLK
DNVLRVGGGEVAVPFLHEKDIPSHFLDERKAEASSSGAQATSGATGKTDPTKGSPSGSAG
GNLTQGPEFEAKVAKLVELGFGREAVVQALKFFDGNEEQAAGYLFGG*

Transcript Sequence

Transcript ID

Solyc10g005890.3.1
Transcript Infomation

DNA damage-inducible protein 1 (AHRD V3.3 *** A0A0B2RHB2_GLYSO)
Sequence

ACAATAAGTTATTCTAATATAATTTGTATTCAAATCAAACTAGGGAGAGTTGTATTTAGA
CTAAACAAACACATAACACCAGCTTAATTATAAGCTTCTTGGTAAAGAGGTCCAAAAGTT
GATCGGATAATATTATTTGCCATCCAAATTCGAAGTCGCCGTCGGTAAACATAGTCGTCG
GTCATCGGAAGCTTCAGAAGTCCTTCCCCCGGTGACTTCGTCGGAGTCAGCAATTCAATT
CGGCAATAAGAAACGAAACGGCGGGGAGGAATTTCGCCGGAGAAATTGACATCGAAGTCC
GTTCAACTATCTGTTCACCAGCATCGCGATAAACGAATCAGGTTTTAATTGAAATTGTGG
AAGATGAAGATCACTGTAATGACGACTGACGAACAAATCGTCACTCTCGATGTGGATCGT
GACGAATCTGTAGAGAACCTGAAAGCTCTGCTGGAAGTTGAGACACAAGTGCCTCTGCAA
CAGCAACAGCTTCTGTACAATGGGAAGGAAATGAGGAATTCTGACAAACTGAGTGCTGTA
GGCGTTGGTGATGGTGATTTGGTAATGATGGTGTCTAGTGCAGCATCCCAGTCTAGTGCC
CCTGCAAATGACTTGAGCTTCAAACAAGATGGATCTGCAGTAAATCCTTCAGCTTTCCAA
CAACACTTGCGAAATGATTCAAATTTGATGGCCCAACTTTTTCAGAATGATCCTGAGTTA
GCACAAGCTGTCCTTGGGAATGACCTAAATAGGCTACAAGAGCTTCTACGTTTGCGTCAT
CAGCATAAATCAGAGCTACGGCGTCGTCAAGAAGAGGAGATGGCACTGCTGTATGCTGAT
CCATTCGATGTCGAGGCACAAAGGAAAATTGAAGAGCAAATTCGCCAGAAAGGAATTGAA
GAAAATTGGGCAGCTGCACTAGAACACAATCCTGAAGCTTTTGGAACTGTGGTTATGTTA
TATGTTGACATGGAAGTAAATGGTCATCCTCTAAAGGCTTTCGTGGATAGTGGAGCTCAG
TCAACAATTATATCTAAAAGCTGTGCAGAACGTTGTGGATTGTGGAGATTATTAGATACA
CGCTACAAGGGAATTGCTCGTGGAGTTGGTCAAACAGAGATACTAGGTCGTATTCATGTT
GCTCCAATCAAGATTGGAAAAATCTTCTACCCTTGTTCTTTTGTGGTGCTGGATTCTCCC
AATATGGAATTTCTCTTTGGACTTGATATGCTTCGCAAGCACCAGTGCATGATTGATCTG
AAGGACAATGTTCTGAGAGTTGGCGGAGGAGAGGTTGCTGTACCATTTCTACATGAGAAG
GATATTCCCAGTCATTTTCTCGATGAGAGGAAGGCCGAGGCTTCGAGCTCAGGAGCCCAG
GCAACATCAGGAGCAACGGGGAAGACTGATCCTACAAAAGGAAGTCCTTCTGGAAGTGCC
GGTGGGAACTTAACACAGGGACCTGAATTTGAAGCCAAAGTTGCAAAGCTTGTTGAGTTA
GGCTTTGGAAGGGAGGCAGTAGTACAAGCTCTCAAGTTTTTTGATGGTAACGAAGAACAA
GCTGCCGGATATCTATTTGGGGGTTGATTATTTTCCCTTTTCTGTCATAGAATTAAGATT
TGTGGCTTAATTTGTATACTCAAAACATTTTTTGGGCATTCAAACTCATCTTAGAAATTA
ATTATTATTGTTGGACACAAAATTAACCTTGTTGTCCTGCTGATGGATTTGCTCAGGGAG
TGGAATTCAAGGTGAATTATTTGGTTATATGGTTTGGTTGGATGTTAATTTAGACTTAAT
GCATGAAAGGAAATTTGCTTTATTTTCAAGTTCACCTGCACTTCAATTTTTCATTATAGT
ACTTCCAAGTGTGTAATCTTTTTCAATCACACATTGCACACATATTTCCATTAGATACAC
TTTTTTTCCAATTATTTTCATAGTTTCTCCTTCCCTATTTTGGTGTATCGAATTTTCGTA
GCAGCTTTCTACTGTGAAGGAGTTGAGCTAGTTCTCAATTTCTGCATCTGAATTATGAAT
AACAGTGGATGTAGTAATCGCTTTGATTATGTTTTTTCTGTGTATATCCTACCTTCCTTG
GATCCCACTTGTGAAATTACACTGAGTACATGAGATTGTATCTTTCAGGGTTGTAAGCTC
GTTCCGGAATAATGGAACTCAATTGATAGAGAAACCCTTGTTCTTCTGACTCAGGAAAAA
ACTAGTGAGACTCAAAGTGTACAATAAGTTTGAAGATTGCATTGCCAGGGTAACTGTAGT
TGAATACAAGTTTAAAATGTACAAAAGCTTGAACACATTTCAACTTGACTTCCTTCTCTA
CATCATGATCTCTCTCTCTCTCTCACGCGATTGAGAGATGGAACGCGACCAACAATTAAT
GTTCAGTCATCATCTGTGCCAAAATACCTGTCACCAAACTCCCCCATTCCAGGGATAACA
CGATATTCATCGTTCAAACCATTTTCTATCTCAGATGTCACAATCTTTATTCTTGGAAAA
TGCTTACAGACCACATGTACTCCTTGGGGTGCCTAGTTTAAGAACAACACTAGTTATGAT
CTCAGAATTATGTTGCAAACTTGCAATAGAAGCTGTACTAGTTAAGAACAACACTACTTG
TGATCTCAGAATTATGTTGCAAACTTGCAACAAGATCTGTACTTGTTTATGCACTATGAC
AATTGGTATTTGTTGA