Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g005650.3.1
CDS Infomation

Peroxisomal targeting signal 1 receptor (AHRD V3.3 *** Q9ZTK6_TOBAC)
Sequence

ATGGCGATGAGAGACTTGGTCACCGGTGCTCCTAGTTGTGGCGAACCTTCTTCTTCTTCT
AATCCACTTGGTGCTCTCGCTAACGCACTCATCGGTTCATCATCTAAGACTCAGGAGAGG
CTAAAAGAGATCCCTACATCAGTAAGTACATCGTCCAATGGCAACTTCCTTGCGGGTGTT
GAAGAGCCATTTGTCTCGCTTCCAGGATCAGAGTTTGAACATCCACTTCAGCCTAATATT
CAGGGTTCCCAATTCCTTCAAGGGTATCGTTCTGCTGATCAAAATAAGCTTGCTGATGCT
TGGGATGAGATACAAAGGCCTCAACTTCCTTTTCCTCATGGAAGTCAGAACATGACAAAC
ATCCCTTTGGAGCATGCTCGGCTTCAACCCGATTTGAATGGGCCTCCACAACAAGTATTG
TCTAGCTTTCTGCACTCGTTTGTCAACAGCGGTCATGGTGGTGTTCCGTTTCGTCCTGCT
TCACTACCATTATTAGGTTTATCGGAAGGTGACAAGCAATGCATACGGGACCGTAGCACG
ATCATGGCCCGACATTTTTTTGCTGATAAAACTGAAGACTTCATAAATGGACAGGTTAAT
GCTCTATTGTCTTCATTAGAAATTGATAATCATGTTAGGGCAAGGGGCCCTCTGCCTGGA
AGATATCCCGAGCTTGAGGAGTATTGGAATGAGTCATTAGCTATGAAACCTGTGCCTCAT
GTTGCAGATGGATGGATTAATGAATTTGCACAGAACCGAGTAGGACATGCTGACCCCAAT
GCTTGGGCCCAATCATTTGAACAACAACATGGTGCTAATGGCTGGGCATCTGAATTTGAG
CATGAGCAATCCCAACTTGGAATGATTGGTCAAATGAGAGGTGCAAATATTCCTAATCTA
GCAGCAATGGAACAAACACGCATGTTGGCCCATACTTTAGCTCAAAACAGTGACCCAAAA
TTTCAGAATTCCAAGTTTCTCCAATTTGTATCCAAGATGAGTCGTGGTGAAATTTCTATT
GAAGAAAATCAATTCAAGCCTGCTACAGTTTCTTCTGGGGATTGGGCAGCAGAATATGAA
CAGAAGCATAATGGAGGTCAATCATGGGCTGATCAGTTTGCACATGAGGAGCTTTCTCGT
GGACCACAAGGGTGGGTGAATGAGTTTTCTGCTGAACGTGCACAGCATGGATCTGTAAAT
GATGAGTGGGTAAGTGAATTTTCAAAGTTGAATGTGAATGATGATTGGGCAGATGAATTT
GGGCGTCAAGTTGCTGAAGGTGCGTTTGGTGAAACCTCTGCTGATGGTTGGGCAGAGGCT
TATGATGAGTATATGAATGAGCAAGCTGCTCTCAAGCAGCAATCAGACGCATCGAGGGGA
GTTTATGTGTTCTCTGATATGAACCCTTATGTTGGTCATCCTAATCCTTTAAAAGAAGGG
CAAGAATTGTTTCGTAAGGGTCTCTTAAGTGAAGCAGTTCTTGCTTTGGAGGCTGAAGTC
TTGAAGAACCCTGAAAATGCTGAGGGTTGGAGGTTACTTGGCATAGCACATGCTGAAAAC
GATGATGATCAACAGGCTATAGCTGCTATGATGCGGGCACAGGAGGCTGATCCCGCAAAT
TTGGAAGTTCTTCTTTCCCTTGGAGTAAGTCATACAAATGAACTGGAGCAACAAGCTGCA
TTGAAGTATTTGTATAGTTGGTTACGCCACCACCCGAAGTATGGGAGTATTGCGCCTCAG
GAGCAGCCCATTTCTTTCTATCATGCTGATGTAGCTAGATTGTTTACAGATGCAGCTCAA
ATGGCACCTGAGGATGCTGACGTACACATTGTACTTGGGGTGTTATACAATCTATCAAGA
GAGTATGACAGAGCTATAGAGTCTTTTAAGACAGCACTAGAGCTCAAACCTAGGGACTAC
TCACTCTGGAATAAGCTTGGTGCAACACAAGCTAACAGTGTGCAGAGTTCTGATGCAATA
TTGGCTTATCAGCAGGCGCTAGATATAAAGCCTAACTATGTACGTGCATGGGCAAACATG
GGCATCAGTTATGCCAACCAGGGTATGTATGAGGATTCCATCCGTTATTATGTCCGGGCA
CTAGCAATGAATCCCAAAGCAGATAATGCCTGGCAATATTTGAGAATATCTCTGAGTTGT
GCATCTCGAAATGATATGTTAGAAGCATGTGACTCGCGTAATCTTGATGTTCTCCAGAAG
GAATTCCCTCTCTGA

Peptide Sequence

PEP ID

Solyc10g005650.3.1
PEP Infomation

Peroxisomal targeting signal 1 receptor (AHRD V3.3 *** Q9ZTK6_TOBAC)
Sequence

MAMRDLVTGAPSCGEPSSSSNPLGALANALIGSSSKTQERLKEIPTSVSTSSNGNFLAGV
EEPFVSLPGSEFEHPLQPNIQGSQFLQGYRSADQNKLADAWDEIQRPQLPFPHGSQNMTN
IPLEHARLQPDLNGPPQQVLSSFLHSFVNSGHGGVPFRPASLPLLGLSEGDKQCIRDRST
IMARHFFADKTEDFINGQVNALLSSLEIDNHVRARGPLPGRYPELEEYWNESLAMKPVPH
VADGWINEFAQNRVGHADPNAWAQSFEQQHGANGWASEFEHEQSQLGMIGQMRGANIPNL
AAMEQTRMLAHTLAQNSDPKFQNSKFLQFVSKMSRGEISIEENQFKPATVSSGDWAAEYE
QKHNGGQSWADQFAHEELSRGPQGWVNEFSAERAQHGSVNDEWVSEFSKLNVNDDWADEF
GRQVAEGAFGETSADGWAEAYDEYMNEQAALKQQSDASRGVYVFSDMNPYVGHPNPLKEG
QELFRKGLLSEAVLALEAEVLKNPENAEGWRLLGIAHAENDDDQQAIAAMMRAQEADPAN
LEVLLSLGVSHTNELEQQAALKYLYSWLRHHPKYGSIAPQEQPISFYHADVARLFTDAAQ
MAPEDADVHIVLGVLYNLSREYDRAIESFKTALELKPRDYSLWNKLGATQANSVQSSDAI
LAYQQALDIKPNYVRAWANMGISYANQGMYEDSIRYYVRALAMNPKADNAWQYLRISLSC
ASRNDMLEACDSRNLDVLQKEFPL*

Transcript Sequence

Transcript ID

Solyc10g005650.3.1
Transcript Infomation

Peroxisomal targeting signal 1 receptor (AHRD V3.3 *** Q9ZTK6_TOBAC)
Sequence

GCGATAAAAACGACCAAACCCCAATTTCTGTCCATCACAAATAATCACGACTCCCTTCCC
TATATTCCCACACAATCACTACACAACAAGTTTTACACCTCACCGTCTCCTCCGTCGACC
GTCGTCTTCTTAACCGCCGGCACCATCTCTCCTCCCTTCAATCGACTACAATTCGTATAA
TATCATATAATACTGACAAAAGAGGGAAGAAAACTCGAACAAAGTCATGGCGATGAGAGA
CTTGGTCACCGGTGCTCCTAGTTGTGGCGAACCTTCTTCTTCTTCTAATCCACTTGGTGC
TCTCGCTAACGCACTCATCGGTTCATCATCTAAGACTCAGGAGAGGCTAAAAGAGATCCC
TACATCAGTAAGTACATCGTCCAATGGCAACTTCCTTGCGGGTGTTGAAGAGCCATTTGT
CTCGCTTCCAGGATCAGAGTTTGAACATCCACTTCAGCCTAATATTCAGGGTTCCCAATT
CCTTCAAGGGTATCGTTCTGCTGATCAAAATAAGCTTGCTGATGCTTGGGATGAGATACA
AAGGCCTCAACTTCCTTTTCCTCATGGAAGTCAGAACATGACAAACATCCCTTTGGAGCA
TGCTCGGCTTCAACCCGATTTGAATGGGCCTCCACAACAAGTATTGTCTAGCTTTCTGCA
CTCGTTTGTCAACAGCGGTCATGGTGGTGTTCCGTTTCGTCCTGCTTCACTACCATTATT
AGGTTTATCGGAAGGTGACAAGCAATGCATACGGGACCGTAGCACGATCATGGCCCGACA
TTTTTTTGCTGATAAAACTGAAGACTTCATAAATGGACAGGTTAATGCTCTATTGTCTTC
ATTAGAAATTGATAATCATGTTAGGGCAAGGGGCCCTCTGCCTGGAAGATATCCCGAGCT
TGAGGAGTATTGGAATGAGTCATTAGCTATGAAACCTGTGCCTCATGTTGCAGATGGATG
GATTAATGAATTTGCACAGAACCGAGTAGGACATGCTGACCCCAATGCTTGGGCCCAATC
ATTTGAACAACAACATGGTGCTAATGGCTGGGCATCTGAATTTGAGCATGAGCAATCCCA
ACTTGGAATGATTGGTCAAATGAGAGGTGCAAATATTCCTAATCTAGCAGCAATGGAACA
AACACGCATGTTGGCCCATACTTTAGCTCAAAACAGTGACCCAAAATTTCAGAATTCCAA
GTTTCTCCAATTTGTATCCAAGATGAGTCGTGGTGAAATTTCTATTGAAGAAAATCAATT
CAAGCCTGCTACAGTTTCTTCTGGGGATTGGGCAGCAGAATATGAACAGAAGCATAATGG
AGGTCAATCATGGGCTGATCAGTTTGCACATGAGGAGCTTTCTCGTGGACCACAAGGGTG
GGTGAATGAGTTTTCTGCTGAACGTGCACAGCATGGATCTGTAAATGATGAGTGGGTAAG
TGAATTTTCAAAGTTGAATGTGAATGATGATTGGGCAGATGAATTTGGGCGTCAAGTTGC
TGAAGGTGCGTTTGGTGAAACCTCTGCTGATGGTTGGGCAGAGGCTTATGATGAGTATAT
GAATGAGCAAGCTGCTCTCAAGCAGCAATCAGACGCATCGAGGGGAGTTTATGTGTTCTC
TGATATGAACCCTTATGTTGGTCATCCTAATCCTTTAAAAGAAGGGCAAGAATTGTTTCG
TAAGGGTCTCTTAAGTGAAGCAGTTCTTGCTTTGGAGGCTGAAGTCTTGAAGAACCCTGA
AAATGCTGAGGGTTGGAGGTTACTTGGCATAGCACATGCTGAAAACGATGATGATCAACA
GGCTATAGCTGCTATGATGCGGGCACAGGAGGCTGATCCCGCAAATTTGGAAGTTCTTCT
TTCCCTTGGAGTAAGTCATACAAATGAACTGGAGCAACAAGCTGCATTGAAGTATTTGTA
TAGTTGGTTACGCCACCACCCGAAGTATGGGAGTATTGCGCCTCAGGAGCAGCCCATTTC
TTTCTATCATGCTGATGTAGCTAGATTGTTTACAGATGCAGCTCAAATGGCACCTGAGGA
TGCTGACGTACACATTGTACTTGGGGTGTTATACAATCTATCAAGAGAGTATGACAGAGC
TATAGAGTCTTTTAAGACAGCACTAGAGCTCAAACCTAGGGACTACTCACTCTGGAATAA
GCTTGGTGCAACACAAGCTAACAGTGTGCAGAGTTCTGATGCAATATTGGCTTATCAGCA
GGCGCTAGATATAAAGCCTAACTATGTACGTGCATGGGCAAACATGGGCATCAGTTATGC
CAACCAGGGTATGTATGAGGATTCCATCCGTTATTATGTCCGGGCACTAGCAATGAATCC
CAAAGCAGATAATGCCTGGCAATATTTGAGAATATCTCTGAGTTGTGCATCTCGAAATGA
TATGTTAGAAGCATGTGACTCGCGTAATCTTGATGTTCTCCAGAAGGAATTCCCTCTCTG
ATACACTTTGGTCTTAAAATGGTGATATGAGAGTAGAAGCATTCGATTTCCCTCGTCTTA
AAGGATTCCAAGATTCACATCCTCTTTAGCCTTGTGGACTTGATTTGCAATAATTATATT
CACTGTTTTTATAGCTCATTGGATCCCTCAACGCCTGCAAGCTATAATATTGTTTATCCC
CTTGAGATTAGAACTTAAAAGAGGACATGACAATGGTCCGGAACTAGCATAGTGCCAAGC
TTACATCTGTCAATCATTCAGTGATTGTATTGTAGGAATGAAATCATTATGTAATGAAAT
AATAAACTAGTGAGAAGGTGGGTTTTGGGTGGGGGTTTGAAGATATAAAGCCGCAAGAGA
ACATAAATAAGTGTAATAATAGCTAGTGTAAAGTTGTATCTTGTGAAATGGTGTTTCATT
CTGGTATCAGCCGGGGAAATTCCTCGACTATTTCGTGTTGTATTTGGGAG