Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc10g005610.2.1
CDS Infomation	serine/arginine repetitive matrix-like protein (AHRD V3.3 *** AT1G56020.1)
Sequence	ATGGCTTCAGCTTGTATAAACAACGTCGGGGTGTCGCCGGAGAATTTTCTCGATTGTTCT CCGACCAAGTACAAGTCATATGGTTGGTTGAGTCCTAGAATATCAACAGCTGTGGATAAT CCGGAAGTAATAATAGATCCGGAAGTTTCCGTCAATGAAATGGTGGATTTCGAGTTCCGA CTTGAAGATCCGGTGAATATGTTACCGGCGGATGAGCTTTTTTCTGATGGAAAATTAATG CCTCTGCAACTCCCGACGGTTCGTCCGGCGGCTGTATCTACGTCTGCCGGTGTAAGGTCG CCGGAGACGCCGAAACTTCGTATGAGAAATAATGAGATTTCTCGTAAGGACCCGTATCTG TTCTCTCCGAAAGCTCCAAGGTGTTCTAGTCGATGGAGAGAGATTCTAGGGTTGAAGAAA TTGCAAAATGACAAGCACGAAGCTACAAAAAATTGCTCCAATGCTCATAAATCTCTGAAG AATTTCCTCAATCGCAGCTCGAAATCATCCACCAATGATTCGACTCTTCATCTTCCTTTG CTCAATAAGGACTCTGATAACGAGTCCATATCAATTTCTAGTTCCCGTTTATCTCTTTCA TCGTCTTCCTCTTCCGGCCATGAACACGATGATCTTCCTAGACTTTCTCTTGATTCTGAT AAACCAACTACTCAAACAAACCACAATAGCAATCCTAATCCCCCTAGAATCCGATTAGTG AAACATAGAGCTTTGTCGTCGGAAAATCCAGTCCCTACTCGATTAGCTGGAAGCCCAATA AACAAACCACCAGCTGATTCTACTCTCCGGGGACTCTCCATTGATGATAGTCCTCGCATG AATTCTTCAGGGAAGATAATTTTTCACAACTTAGGAAGAAGCTCAAGTAGTCCAAGCAGC TTCAATGGTGCACCAAGGTACAAACATGGAGGTGGGGTGGAAAGGTCCTATTCAGCTAAT GTTCGTGTTACTACAGTTCTGAATGTTCCCGTTTGCAGCTCTCTTCGAGGTTCTTCAAAA TCTGGAGTTTTTGGGTTTCCCCTGTTTTCTTCTGCTACTGTAAACAAGAAACACCATTGT AACAGCAACACTGCAACAGGCCATAGAATGAAGTAA

Peptide Sequence

PEP ID	Solyc10g005610.2.1
PEP Infomation	serine/arginine repetitive matrix-like protein (AHRD V3.3 *** AT1G56020.1)
Sequence	MASACINNVGVSPENFLDCSPTKYKSYGWLSPRISTAVDNPEVIIDPEVSVNEMVDFEFR LEDPVNMLPADELFSDGKLMPLQLPTVRPAAVSTSAGVRSPETPKLRMRNNEISRKDPYL FSPKAPRCSSRWREILGLKKLQNDKHEATKNCSNAHKSLKNFLNRSSKSSTNDSTLHLPL LNKDSDNESISISSSRLSLSSSSSSGHEHDDLPRLSLDSDKPTTQTNHNSNPNPPRIRLV KHRALSSENPVPTRLAGSPINKPPADSTLRGLSIDDSPRMNSSGKIIFHNLGRSSSSPSS FNGAPRYKHGGGVERSYSANVRVTTVLNVPVCSSLRGSSKSGVFGFPLFSSATVNKKHHC NSNTATGHRMK*

Transcript Sequence

Transcript ID	Solyc10g005610.2.1
Transcript Infomation	serine/arginine repetitive matrix-like protein (AHRD V3.3 *** AT1G56020.1)
Sequence	TCGAGTAGTGAAAACAGTTATCGTATACGATTTTCATTATATCTCTCAAAATGTAATTCG TTATTATGATTTATATATACAATTTTCATCATATTTATTGTTATAAAAGTTATTTATTTA TTAAAATTTATATAAATACGAAATGATTTATGCACCGAACTATCGGTTGGCATTTCTAAT CTACTAGTATCCCATTCATCACTACACTATACTACTACTATGCTATGCTTAGCTTCAACT AAACTCCACAATATTCACAACCCCCTCGCTAAACCCTAGCTAGCTTAGCTTAGCTTTTTT TCTGAAAACTCCCGGGGTTCTATACAAATGGTACCTCTCCTTTCTTCTTTCAACTGCAGA ATTTGATTTTACTACAAGTTTGTTTTTGGGTATTTTTTCTTTGTTTTTTTCACCAATTAA ATCCATGGCTTCAGCTTGTATAAACAACGTCGGGGTGTCGCCGGAGAATTTTCTCGATTG TTCTCCGACCAAGTACAAGTCATATGGTTGGTTGAGTCCTAGAATATCAACAGCTGTGGA TAATCCGGAAGTAATAATAGATCCGGAAGTTTCCGTCAATGAAATGGTGGATTTCGAGTT CCGACTTGAAGATCCGGTGAATATGTTACCGGCGGATGAGCTTTTTTCTGATGGAAAATT AATGCCTCTGCAACTCCCGACGGTTCGTCCGGCGGCTGTATCTACGTCTGCCGGTGTAAG GTCGCCGGAGACGCCGAAACTTCGTATGAGAAATAATGAGATTTCTCGTAAGGACCCGTA TCTGTTCTCTCCGAAAGCTCCAAGGTGTTCTAGTCGATGGAGAGAGATTCTAGGGTTGAA GAAATTGCAAAATGACAAGCACGAAGCTACAAAAAATTGCTCCAATGCTCATAAATCTCT GAAGAATTTCCTCAATCGCAGCTCGAAATCATCCACCAATGATTCGACTCTTCATCTTCC TTTGCTCAATAAGGACTCTGATAACGAGTCCATATCAATTTCTAGTTCCCGTTTATCTCT TTCATCGTCTTCCTCTTCCGGCCATGAACACGATGATCTTCCTAGACTTTCTCTTGATTC TGATAAACCAACTACTCAAACAAACCACAATAGCAATCCTAATCCCCCTAGAATCCGATT AGTGAAACATAGAGCTTTGTCGTCGGAAAATCCAGTCCCTACTCGATTAGCTGGAAGCCC AATAAACAAACCACCAGCTGATTCTACTCTCCGGGGACTCTCCATTGATGATAGTCCTCG CATGAATTCTTCAGGGAAGATAATTTTTCACAACTTAGGAAGAAGCTCAAGTAGTCCAAG CAGCTTCAATGGTGCACCAAGGTACAAACATGGAGGTGGGGTGGAAAGGTCCTATTCAGC TAATGTTCGTGTTACTACAGTTCTGAATGTTCCCGTTTGCAGCTCTCTTCGAGGTTCTTC AAAATCTGGAGTTTTTGGGTTTCCCCTGTTTTCTTCTGCTACTGTAAACAAGAAACACCA TTGTAACAGCAACACTGCAACAGGCCATAGAATGAAGTAATTTATAATCCGAGTCAAGTA TAATGAGTATTTTGTGATACACGTTCTATATGTCATTTTACTATAAGCGACAGAGAACTT CAGAACATTTTGCAGCAGCAGCCAAGCCACTAATGATAGCCCCTTCAACATTTGGACTAA CACAAAAGTCTCCGCATACTGCAAGCCTTTTCTTCGCGTCCCAAAGGCATTTTTCATTTT CTGCTACGCTTATTGCTGGGAAAGCACTGCCCCTGACGAATTCACAAGCGATAGTGATGA TAGATATGACGTGAAATACACATACAGCAACAAGCAAGAAGAAGGGAATACATGTCTAAG TACTTCATCCACTAACATGACTACACAACTGCCATCTGAGACTGATATGATTCCAAGACA CAATTTTAGCTCAAACATTTGTTTCTTTTTCTTTCTTCCCTTTGGAATAATGGTTGTGCC CGATTGCCCGGGCTAGAATGAGTACTTATACAGGCTCTACCTATCCATCGTGTACATACA TCTTCCTATTAATATAGATATCGAGTAACAGTATGATTTTTTTGGTAACCTGAGGCACTG TTTTAACACTATATCTCCACTAGAAATGTTGTTGTCTGGTAAATTTATAAGTGTGATTTT TGTCTATTTCAAAATAAGGAACGCATGCAGCTAGCTAAATGCGAAACTGAGATGAGCAGC TGTATATGTTAGATACTGACCATCGATGAGCTTTCTTAAAGA