Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g005520.3.1
CDS Infomation

RNA helicase DEAD30
Sequence

ATGGAAGAGGAAGTCCAAGTGGATGAGAATTTTCCCTTATTCTCCCGGAAAACTAAACCG
GCCACAAAAAAACTCGTTCCTGCTCCAACCTCCATTGAAGAAACCCCAAAGCAGCTTGAC
AAGGAGACTAACTCTGGTCCAACCCCTAGTTATATCACCTTCTCTGACTTAGGCCTCGCC
GGGTGGGCTGTACAGACCTGTAATGAGCTGGGCATGAAGAAACCCACTCCTGTACAATAT
CACTGTATACCCAGAATACTCTCCGGACAGGATGTGTTAGGTTTAGCTCAGACTGGTAGT
GGAAAAACAGCTGCATTTGCATTGCCTATTCTTCATCGTTTAGCTGAAGATCCTTATGGG
GTGTCCTGTCTTGTGGTTACTCCGACACGGGAGCTTGCGTTTCAGCTTGCCGAGCAGTTT
CGGGCCCTGGGATCCTGCTTGAATTTGCGGTGTGCTGTGATTGTGGGAGGAATGGATATG
ATAACCCAGACTAAGACTCTGATGCAAAGACCTCATGTGGTGATAGCAACTCCCGGAAGG
ATTAAGGTTCTCATTGAACAGAATCCTGATATTCCCCCAGTTTTCAGCAAAACTAAGTTC
CTTGTCTTGGATGAAGCAGATAGAGTTCTAGACGTAGGCTTTGAAGAGGAGTTGAGAGCA
ATCTTTCAGTGTTTGCCAAAGAATCGACAAACTCTTCTGTTTTCTGCAACAATGACTAGC
AACCTGCAGACGCTACTTGAGCTTTCTGCAAACAAAGCATATTTCTATGAGGCATATGAG
GGATTCAAGACTGTAGAATCACTTAAGCAGCAGTACATTTTTATTCCGAAAAATGTGAAG
GATGTCTATCTGCAATACATTTTATCCAAAATCAAAGATATAGACGTTCGCTCTGCAATT
ATTTTTGTTTCCACCTGCAGGAGTTGTCAGCTTTTGGGCTTGTTGTTGGAAGAACTCGAA
ATTGATGCTGCTGCATTGCATTCATACAAGTCCCAGTCACTGAGGCTTTCTGCTCTTCAT
AAATTCAAATCTGGGCAGGTCCCAATATTGGTCGCTACTGATGTCGCGAGTCGTGGTTTA
GACATTCCAACAGTTGATCTGGTGGTAAATTATGACATTCCAAGGTATCCACAGGATTAT
GTTCATCGTGTTGGACGTACTGCAAGAGCTGGACGAGGTGGACTTGCTGTCAGCTTTGTT
ACTCAGAATGATGTGGATCTCATTCATGAAATAGAAGCGGTGCTTGGGAAACAATTGGAG
AAATTTGATTGTAAAGAGAATGAGGTGCTTGATGATATATCAAAGGTTTACAAGGCGAAG
CGTGTTGCATCAATGAAGATGATGGATGATGGGTTTGAGGAGAAAGCAGAAAGTCGTAAA
GCCCAGAAACAGAAAATGCAAAATGAGAGAAAGGGAAAGAGCAAAAAGCAGAAAAGAGAA
AGAGTAACAAAAGATATAGAAGTTTGA

Peptide Sequence

PEP ID

Solyc10g005520.3.1
PEP Infomation

RNA helicase DEAD30
Sequence

MEEEVQVDENFPLFSRKTKPATKKLVPAPTSIEETPKQLDKETNSGPTPSYITFSDLGLA
GWAVQTCNELGMKKPTPVQYHCIPRILSGQDVLGLAQTGSGKTAAFALPILHRLAEDPYG
VSCLVVTPTRELAFQLAEQFRALGSCLNLRCAVIVGGMDMITQTKTLMQRPHVVIATPGR
IKVLIEQNPDIPPVFSKTKFLVLDEADRVLDVGFEEELRAIFQCLPKNRQTLLFSATMTS
NLQTLLELSANKAYFYEAYEGFKTVESLKQQYIFIPKNVKDVYLQYILSKIKDIDVRSAI
IFVSTCRSCQLLGLLLEELEIDAAALHSYKSQSLRLSALHKFKSGQVPILVATDVASRGL
DIPTVDLVVNYDIPRYPQDYVHRVGRTARAGRGGLAVSFVTQNDVDLIHEIEAVLGKQLE
KFDCKENEVLDDISKVYKAKRVASMKMMDDGFEEKAESRKAQKQKMQNERKGKSKKQKRE
RVTKDIEV*

Transcript Sequence

Transcript ID

Solyc10g005520.3.1
Transcript Infomation

RNA helicase DEAD30
Sequence

TTAAACCCAAATTAATAGATTTATTTGGGCTTTTCCAAATCGGCCCATTTATAGCTCTGA
AAACTGAAAGCCGCCGTCTTCCATCTCTGTCTCCGGCACTGTCTTCTCTCCGATAACCGC
AACTTTCTCAGAGTCTAACGGAATTTCTCTTTGAAACCCTAATAACAGTTACCTTAGTTG
AGTTCTGTATACAATGGAAGAGGAAGTCCAAGTGGATGAGAATTTTCCCTTATTCTCCCG
GAAAACTAAACCGGCCACAAAAAAACTCGTTCCTGCTCCAACCTCCATTGAAGAAACCCC
AAAGCAGCTTGACAAGGAGACTAACTCTGGTCCAACCCCTAGTTATATCACCTTCTCTGA
CTTAGGCCTCGCCGGGTGGGCTGTACAGACCTGTAATGAGCTGGGCATGAAGAAACCCAC
TCCTGTACAATATCACTGTATACCCAGAATACTCTCCGGACAGGATGTGTTAGGTTTAGC
TCAGACTGGTAGTGGAAAAACAGCTGCATTTGCATTGCCTATTCTTCATCGTTTAGCTGA
AGATCCTTATGGGGTGTCCTGTCTTGTGGTTACTCCGACACGGGAGCTTGCGTTTCAGCT
TGCCGAGCAGTTTCGGGCCCTGGGATCCTGCTTGAATTTGCGGTGTGCTGTGATTGTGGG
AGGAATGGATATGATAACCCAGACTAAGACTCTGATGCAAAGACCTCATGTGGTGATAGC
AACTCCCGGAAGGATTAAGGTTCTCATTGAACAGAATCCTGATATTCCCCCAGTTTTCAG
CAAAACTAAGTTCCTTGTCTTGGATGAAGCAGATAGAGTTCTAGACGTAGGCTTTGAAGA
GGAGTTGAGAGCAATCTTTCAGTGTTTGCCAAAGAATCGACAAACTCTTCTGTTTTCTGC
AACAATGACTAGCAACCTGCAGACGCTACTTGAGCTTTCTGCAAACAAAGCATATTTCTA
TGAGGCATATGAGGGATTCAAGACTGTAGAATCACTTAAGCAGCAGTACATTTTTATTCC
GAAAAATGTGAAGGATGTCTATCTGCAATACATTTTATCCAAAATCAAAGATATAGACGT
TCGCTCTGCAATTATTTTTGTTTCCACCTGCAGGAGTTGTCAGCTTTTGGGCTTGTTGTT
GGAAGAACTCGAAATTGATGCTGCTGCATTGCATTCATACAAGTCCCAGTCACTGAGGCT
TTCTGCTCTTCATAAATTCAAATCTGGGCAGGTCCCAATATTGGTCGCTACTGATGTCGC
GAGTCGTGGTTTAGACATTCCAACAGTTGATCTGGTGGTAAATTATGACATTCCAAGGTA
TCCACAGGATTATGTTCATCGTGTTGGACGTACTGCAAGAGCTGGACGAGGTGGACTTGC
TGTCAGCTTTGTTACTCAGAATGATGTGGATCTCATTCATGAAATAGAAGCGGTGCTTGG
GAAACAATTGGAGAAATTTGATTGTAAAGAGAATGAGGTGCTTGATGATATATCAAAGGT
TTACAAGGCGAAGCGTGTTGCATCAATGAAGATGATGGATGATGGGTTTGAGGAGAAAGC
AGAAAGTCGTAAAGCCCAGAAACAGAAAATGCAAAATGAGAGAAAGGGAAAGAGCAAAAA
GCAGAAAAGAGAAAGAGTAACAAAAGATATAGAAGTTTGAGATCTCCTATATTTGTGGAT
AGCTTAGGAGAAGAGAGTTTTTTTTTTTATGTAAAAGAGTTCTATTTTACACAAGTGGCT
AAGATGTATATGATTTGGGTTTGGTTCGGATTTTTCAAATATTAAATCAAACCATTTGTA
TCAAAT