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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc10g005500.3.1
CDS Infomation

Cation efflux family protein (AHRD V3.3 *** AT1G16310.1)
Sequence

ATGGAGATCAGTCGGAGTAATGTTGGTGGCGGCAGCAATGACGGCCCTCTGTTCGACAGT
TTTAGGACGGAACTGCTGTCTCCGGCTGCCCAGGCGGTGGTTGATCAGATTCAGTCATCA
TCTTCCGCGTCATGGAGGCTTAACGTTAGTGAATTTCATCTTCCAGAGCAACGACGCTCT
GATCCTCGCTGCTTCAGTGTCCGTCGTCTCCTTCCCACTCCCAGGAAACAGGGTAAAATC
GCGGAATATTACAAAAGGCAGGAAAGGCTTGTAGAAGGGTTCAATGAGATGGATACCATT
AATGAATCTGGTTGTTTACCTGCAAGTCTAACTGAGGACGAAATGAAGCAGCTTGCTAGG
AGTGAAAGGATGGCTATTCATTTATCAAACATGGCTAATGTGTTACTATTCGTAGCAAAA
ATATACGCATCTGTTCAGAGTAAATCATTGGCTGTTATAGCATCGACGTTGGATTCTCTG
TTAGACCTTTTATCCGGGTTTATTCTGTGGTTTACTTCTAATGCCATGAGAAATCCAAAT
CAGTATCACTATCCTATTGGGAAAAAAAGGATGCAGCCTGTGGGTATTATTGTTTTTGCA
TCTGTAATGGCAACACTAGGATTACAAATACTGTTTGAGTCTGCAAAAGAACTTATAAAT
CAGTCTCGCCCTGAGATGGATCACGAGAAGGAAAAATGGACGATTGGGATTATGGTCTCG
GTCACAATGGTCAAGTTTCTGCTTATGGTCTACTGTAGAAGGTTCAAAAATGAAATTGTA
AGAGCTTATGCCCAAGACCATTTCTTTGATGTCATAACCAACTCAGTTGGATTAGTGACT
GCTGTCTTAGCAGTCCGATTCTACTGGTGGATCGATCCTGCAGGAGCTATCATAATAGCT
CTGTACACAATTAGCACGTGGGCGAGGACAGTAGCAGAAAATGTCTGCTCACTCATAGGA
AGAACAGCTCCACCAGACTTCCTTACGAAATTAACCTATCTTATATGGAATCATCATGAA
GAGATCAAGCACATTGACACGGTTAGAGCATATACTTTTGGCGTAAATTACTTTGTGGAA
GTTGATATAGTGTTGCCAGAGGACATGTTTCTGAATCAGGCACATAATATTGGTGAAACA
CTGCAAGAAAAACTGGAGCAACTCCCTGAAGTAGAGCGTGCTTTCGTCCATATTGACTTC
GAGTTTACTCACAGGCCAGAACACAAAATCACAGTGTAA

Peptide Sequence

PEP ID

Solyc10g005500.3.1
PEP Infomation

Cation efflux family protein (AHRD V3.3 *** AT1G16310.1)
Sequence

MEISRSNVGGGSNDGPLFDSFRTELLSPAAQAVVDQIQSSSSASWRLNVSEFHLPEQRRS
DPRCFSVRRLLPTPRKQGKIAEYYKRQERLVEGFNEMDTINESGCLPASLTEDEMKQLAR
SERMAIHLSNMANVLLFVAKIYASVQSKSLAVIASTLDSLLDLLSGFILWFTSNAMRNPN
QYHYPIGKKRMQPVGIIVFASVMATLGLQILFESAKELINQSRPEMDHEKEKWTIGIMVS
VTMVKFLLMVYCRRFKNEIVRAYAQDHFFDVITNSVGLVTAVLAVRFYWWIDPAGAIIIA
LYTISTWARTVAENVCSLIGRTAPPDFLTKLTYLIWNHHEEIKHIDTVRAYTFGVNYFVE
VDIVLPEDMFLNQAHNIGETLQEKLEQLPEVERAFVHIDFEFTHRPEHKITV*

Transcript Sequence

Transcript ID

Solyc10g005500.3.1
Transcript Infomation

Cation efflux family protein (AHRD V3.3 *** AT1G16310.1)
Sequence

TAAATGAGAACATTATTAATCCTCTCGAAATGAGACGGATAAGTGAGAACATTATTGATA
GTCAGAACATAGATATGGATAGATGACTGTTGTCGTGCTGCAATGGAGTAGATATCAAAT
GCATGATGACTGTTAAGTAAAACAATATTTTTATAATCCAATTCTACGTCCATACTAACA
TGTACTAGGGTAATTTAATTCATTTTTTTGCAAGTATTTTAATGCCTTTTTCATTTCCTC
AGCTATTTGATTTTACATGTAAATTAAGAAGAACGAAAACATTTTTATATATATATAAGA
ACTTTCAAATATAAAAATGCATTGTTAACTGATTTTATCATAAAAATATTGTGGTTAACA
ATAACCATAAAGATGATGACTCTTACTATATAAACAGCAGAAAAACTAATTGTTCAGTAA
TATCAGTACGTAACTATTACGACTACTATAAACATGGAGATCAGTCGGAGTAATGTTGGT
GGCGGCAGCAATGACGGCCCTCTGTTCGACAGTTTTAGGACGGAACTGCTGTCTCCGGCT
GCCCAGGCGGTGGTTGATCAGATTCAGTCATCATCTTCCGCGTCATGGAGGCTTAACGTT
AGTGAATTTCATCTTCCAGAGCAACGACGCTCTGATCCTCGCTGCTTCAGTGTCCGTCGT
CTCCTTCCCACTCCCAGGAAACAGGGTAAAATCGCGGAATATTACAAAAGGCAGGAAAGG
CTTGTAGAAGGGTTCAATGAGATGGATACCATTAATGAATCTGGTTGTTTACCTGCAAGT
CTAACTGAGGACGAAATGAAGCAGCTTGCTAGGAGTGAAAGGATGGCTATTCATTTATCA
AACATGGCTAATGTGTTACTATTCGTAGCAAAAATATACGCATCTGTTCAGAGTAAATCA
TTGGCTGTTATAGCATCGACGTTGGATTCTCTGTTAGACCTTTTATCCGGGTTTATTCTG
TGGTTTACTTCTAATGCCATGAGAAATCCAAATCAGTATCACTATCCTATTGGGAAAAAA
AGGATGCAGCCTGTGGGTATTATTGTTTTTGCATCTGTAATGGCAACACTAGGATTACAA
ATACTGTTTGAGTCTGCAAAAGAACTTATAAATCAGTCTCGCCCTGAGATGGATCACGAG
AAGGAAAAATGGACGATTGGGATTATGGTCTCGGTCACAATGGTCAAGTTTCTGCTTATG
GTCTACTGTAGAAGGTTCAAAAATGAAATTGTAAGAGCTTATGCCCAAGACCATTTCTTT
GATGTCATAACCAACTCAGTTGGATTAGTGACTGCTGTCTTAGCAGTCCGATTCTACTGG
TGGATCGATCCTGCAGGAGCTATCATAATAGCTCTGTACACAATTAGCACGTGGGCGAGG
ACAGTAGCAGAAAATGTCTGCTCACTCATAGGAAGAACAGCTCCACCAGACTTCCTTACG
AAATTAACCTATCTTATATGGAATCATCATGAAGAGATCAAGCACATTGACACGGTTAGA
GCATATACTTTTGGCGTAAATTACTTTGTGGAAGTTGATATAGTGTTGCCAGAGGACATG
TTTCTGAATCAGGCACATAATATTGGTGAAACACTGCAAGAAAAACTGGAGCAACTCCCT
GAAGTAGAGCGTGCTTTCGTCCATATTGACTTCGAGTTTACTCACAGGCCAGAACACAAA
ATCACAGTGTAATGACATACATACTAGTTGCATCAAGGACCTTTACTCAAAATAATATTT
ATGTTGAGTTGAATCCATGAATTATTCAAGATCATTGGCTTAGTCCAGATGAAAGAAAAA
TCTAGCGAAGTTTCTTTGTTTGATAAGGTAACAATTTTATTATTGAATTGAGCAATAAAA
AGCTAGTTGAAAACAAGAAGTATATCAAAATGTAGAGAACTTATAAAAAACGGATATTCA
GATACTTATTCAAATTCACAC